RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 USP34Q70CQ2 3546 aa6.41□□□□□ -1.38
VCPIP1-201ENST00000310421 LAMA1P25391 3075 aa6.41□□□□□ -1.38
VCPIP1-201ENST00000310421 NOTCH2NLQ7Z3S9 236 aa6.41□□□□□ -1.38
VCPIP1-201ENST00000310421 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.39
VCPIP1-201ENST00000310421 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
VCPIP1-201ENST00000310421 COL12A1Q99715 3063 aa6.38□□□□□ -1.39
VCPIP1-201ENST00000310421 TGP01266 2768 aa6.37□□□□□ -1.39
VCPIP1-201ENST00000310421 KRTAP13-1Q8IUC0 172 aa6.37□□□□□ -1.39
VCPIP1-201ENST00000310421 XIRP2A4UGR9 3374 aa6.35□□□□□ -1.39
VCPIP1-201ENST00000310421 REV3LO60673 3130 aa6.35□□□□□ -1.39
VCPIP1-201ENST00000310421 ATMQ13315 3056 aa6.35□□□□□ -1.39
VCPIP1-201ENST00000310421 PDZD2O15018 2839 aa6.34□□□□□ -1.39
VCPIP1-201ENST00000310421 KRTAP13-2Q52LG2 175 aa6.34□□□□□ -1.4
VCPIP1-201ENST00000310421 FBN2P35556 2912 aa6.33□□□□□ -1.4
VCPIP1-201ENST00000310421 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
VCPIP1-201ENST00000310421 BRCA2P51587 3418 aa6.33□□□□□ -1.4
VCPIP1-201ENST00000310421 TNP1P09430 55 aa6.32□□□□□ -1.4
VCPIP1-201ENST00000310421 VWFP04275 2813 aa6.32□□□□□ -1.4
VCPIP1-201ENST00000310421 PKD1L1Q8TDX9 2849 aa6.3□□□□□ -1.4
VCPIP1-201ENST00000310421 BOD1L1Q8NFC6 3051 aa6.3□□□□□ -1.4
VCPIP1-201ENST00000310421 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
VCPIP1-201ENST00000310421 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
VCPIP1-201ENST00000310421 A6NN06 94 aa6.25□□□□□ -1.41
VCPIP1-201ENST00000310421 NDUFAF8A1L188 74 aa6.23□□□□□ -1.41
VCPIP1-201ENST00000310421 ADGRG4Q8IZF6 3080 aa6.21□□□□□ -1.42
VCPIP1-201ENST00000310421 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
VCPIP1-201ENST00000310421 TENM2Q9NT68 2774 aa6.2□□□□□ -1.42
VCPIP1-201ENST00000310421 COL6A3P12111 3177 aa6.19□□□□□ -1.42
VCPIP1-201ENST00000310421 A8MU10 97 aa6.19□□□□□ -1.42
VCPIP1-201ENST00000310421 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
VCPIP1-201ENST00000310421 CELSR1Q9NYQ6 3014 aa6.15□□□□□ -1.43
VCPIP1-201ENST00000310421 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
VCPIP1-201ENST00000310421 CELSR3Q9NYQ7 3312 aa6.14□□□□□ -1.43
VCPIP1-201ENST00000310421 CDH23Q9H251 3354 aa6.14□□□□□ -1.43
VCPIP1-201ENST00000310421 FREM2Q5SZK8 3169 aa6.14□□□□□ -1.43
VCPIP1-201ENST00000310421 C10orf95Q9H7T3 257 aa6.12□□□□□ -1.43
VCPIP1-201ENST00000310421 XP32Q5T750 250 aa6.11□□□□□ -1.43
VCPIP1-201ENST00000310421 SRRM2Q9UQ35 2752 aaKnown RBP6.06□□□□□ -1.44
VCPIP1-201ENST00000310421 DMXL1Q9Y485 3027 aa6.04□□□□□ -1.44
VCPIP1-201ENST00000310421 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
VCPIP1-201ENST00000310421 SPTBN5Q9NRC6 3674 aaKnown RBP6.03□□□□□ -1.44
VCPIP1-201ENST00000310421 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
VCPIP1-201ENST00000310421 UNC80Q8N2C7 3258 aa6□□□□□ -1.45
VCPIP1-201ENST00000310421 DNAH14Q0VDD8 3507 aa5.99□□□□□ -1.45
VCPIP1-201ENST00000310421 SZT2Q5T011 3432 aa5.99□□□□□ -1.45
VCPIP1-201ENST00000310421 VCANP13611 3396 aa5.97□□□□□ -1.45
VCPIP1-201ENST00000310421 EYSQ5T1H1 3165 aa5.96□□□□□ -1.46
VCPIP1-201ENST00000310421 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
VCPIP1-201ENST00000310421 COL7A1Q02388 2944 aa5.91□□□□□ -1.46
VCPIP1-201ENST00000310421 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
VCPIP1-201ENST00000310421 CFAP47Q6ZTR5 3102 aa5.89□□□□□ -1.47
VCPIP1-201ENST00000310421 H0YAA0 97 aa5.89□□□□□ -1.47
VCPIP1-201ENST00000310421 P0C880 135 aa5.87□□□□□ -1.47
VCPIP1-201ENST00000310421 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
VCPIP1-201ENST00000310421 NBPF19A0A087WUL8 3843 aa5.86□□□□□ -1.47
VCPIP1-201ENST00000310421 A0A1B0GVY2 172 aa5.83□□□□□ -1.48
VCPIP1-201ENST00000310421 SPEGQ15772 3267 aa5.8□□□□□ -1.48
VCPIP1-201ENST00000310421 ZFHX3Q15911 3703 aa5.76□□□□□ -1.49
VCPIP1-201ENST00000310421 MYO15AQ9UKN7 3530 aa5.76□□□□□ -1.49
VCPIP1-201ENST00000310421 MEGF8Q7Z7M0 2845 aa5.73□□□□□ -1.49
VCPIP1-201ENST00000310421 FBN3Q75N90 2809 aa5.67□□□□□ -1.5
VCPIP1-201ENST00000310421 WDFY3Q8IZQ1 3526 aa5.63□□□□□ -1.51
VCPIP1-201ENST00000310421 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
VCPIP1-201ENST00000310421 LOC400499M0QZD8 3231 aa5.6□□□□□ -1.51
VCPIP1-201ENST00000310421 DMDP11532 3685 aa5.59□□□□□ -1.51
VCPIP1-201ENST00000310421 OTOGQ6ZRI0 2925 aa5.56□□□□□ -1.52
VCPIP1-201ENST00000310421 SPENQ96T58 3664 aaKnown RBP5.53□□□□□ -1.52
VCPIP1-201ENST00000310421 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
VCPIP1-201ENST00000310421 DCHS1Q96JQ0 3298 aa5.47□□□□□ -1.53
VCPIP1-201ENST00000310421 LAMA5O15230 3695 aa5.47□□□□□ -1.53
VCPIP1-201ENST00000310421 ZFHX4Q86UP3 3567 aa5.46□□□□□ -1.53
VCPIP1-201ENST00000310421 TRRAPQ9Y4A5 3859 aa5.44□□□□□ -1.54
VCPIP1-201ENST00000310421 ASPMQ8IZT6 3477 aa5.43□□□□□ -1.54
VCPIP1-201ENST00000310421 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
VCPIP1-201ENST00000310421 INE1O15225 51 aa5.39□□□□□ -1.55
VCPIP1-201ENST00000310421 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
VCPIP1-201ENST00000310421 SMG1Q96Q15 3661 aaKnown RBP5.37□□□□□ -1.55
VCPIP1-201ENST00000310421 RELNP78509 3460 aa5.36□□□□□ -1.55
VCPIP1-201ENST00000310421 VPS13CQ709C8 3753 aa5.32□□□□□ -1.56
VCPIP1-201ENST00000310421 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
VCPIP1-201ENST00000310421 AKAP9Q99996 3911 aa5.21□□□□□ -1.58
VCPIP1-201ENST00000310421 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
VCPIP1-201ENST00000310421 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
VCPIP1-201ENST00000310421 CSMD1Q96PZ7 3565 aa5.17□□□□□ -1.58
VCPIP1-201ENST00000310421 ALMS1Q8TCU4 4167 aa5.13□□□□□ -1.59
VCPIP1-201ENST00000310421 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
VCPIP1-201ENST00000310421 MT1HL1P0DM35 61 aa5.09□□□□□ -1.59
VCPIP1-201ENST00000310421 MUC3AQ02505 3323 aa5□□□□□ -1.61
VCPIP1-201ENST00000310421 SVEP1Q4LDE5 3571 aa5□□□□□ -1.61
VCPIP1-201ENST00000310421 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
VCPIP1-201ENST00000310421 CUBNO60494 3623 aa4.98□□□□□ -1.61
VCPIP1-201ENST00000310421 BSNQ9UPA5 3926 aa4.97□□□□□ -1.61
VCPIP1-201ENST00000310421 KRTAP3-3Q9BYR6 98 aa4.95□□□□□ -1.62
VCPIP1-201ENST00000310421 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
VCPIP1-201ENST00000310421 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
VCPIP1-201ENST00000310421 CSMD3Q7Z407 3707 aa4.89□□□□□ -1.63
VCPIP1-201ENST00000310421 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
VCPIP1-201ENST00000310421 CSMD2Q7Z408 3487 aa4.84□□□□□ -1.63
VCPIP1-201ENST00000310421 LYSTQ99698 3801 aa4.83□□□□□ -1.64
VCPIP1-201ENST00000310421 DNAH7Q8WXX0 4024 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms