RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 COX7CP15954 63 aa6.39□□□□□ -1.39
TRIM59-201ENST00000309784 EPPK1P58107 5090 aaKnown RBP6.38□□□□□ -1.39
TRIM59-201ENST00000309784 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
TRIM59-201ENST00000309784 UQCRQO14949 82 aa6.38□□□□□ -1.39
TRIM59-201ENST00000309784 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
TRIM59-201ENST00000309784 LINC00313P59037 77 aa6.37□□□□□ -1.39
TRIM59-201ENST00000309784 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
TRIM59-201ENST00000309784 RYR1P21817 5038 aa6.36□□□□□ -1.39
TRIM59-201ENST00000309784 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
TRIM59-201ENST00000309784 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
TRIM59-201ENST00000309784 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
TRIM59-201ENST00000309784 MP68P56378 58 aa6.33□□□□□ -1.4
TRIM59-201ENST00000309784 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
TRIM59-201ENST00000309784 ASB16-AS1Q495Z4 193 aa6.32□□□□□ -1.4
TRIM59-201ENST00000309784 Q5XG85 94 aa6.32□□□□□ -1.4
TRIM59-201ENST00000309784 HSPG2P98160 4391 aa6.31□□□□□ -1.4
TRIM59-201ENST00000309784 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
TRIM59-201ENST00000309784 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
TRIM59-201ENST00000309784 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
TRIM59-201ENST00000309784 TMEM254Q8TBM7 123 aa6.29□□□□□ -1.4
TRIM59-201ENST00000309784 LINC00208Q96KT6 92 aa6.29□□□□□ -1.4
TRIM59-201ENST00000309784 J3QL48 77 aa6.29□□□□□ -1.4
TRIM59-201ENST00000309784 KRTAP29-1A8MX34 341 aaPredicted RBP6.28□□□□□ -1.4
TRIM59-201ENST00000309784 H0Y9P7 68 aa6.28□□□□□ -1.4
TRIM59-201ENST00000309784 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
TRIM59-201ENST00000309784 PRR4Q16378 134 aa6.27□□□□□ -1.4
TRIM59-201ENST00000309784 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
TRIM59-201ENST00000309784 C5orf47Q569G3 176 aa6.26□□□□□ -1.41
TRIM59-201ENST00000309784 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
TRIM59-201ENST00000309784 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
TRIM59-201ENST00000309784 TRAV22A0A0B4J277 110 aa6.25□□□□□ -1.41
TRIM59-201ENST00000309784 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
TRIM59-201ENST00000309784 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
TRIM59-201ENST00000309784 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.41
TRIM59-201ENST00000309784 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
TRIM59-201ENST00000309784 OXTP01178 125 aa6.2□□□□□ -1.42
TRIM59-201ENST00000309784 PCOTHQ58A44 107 aa6.2□□□□□ -1.42
TRIM59-201ENST00000309784 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
TRIM59-201ENST00000309784 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
TRIM59-201ENST00000309784 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
TRIM59-201ENST00000309784 IGKV2-30P06310 120 aa6.17□□□□□ -1.42
TRIM59-201ENST00000309784 A0A0U1RQV1 116 aa6.17□□□□□ -1.42
TRIM59-201ENST00000309784 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
TRIM59-201ENST00000309784 NDUFC1O43677 76 aa6.15□□□□□ -1.42
TRIM59-201ENST00000309784 Q5W150 140 aa6.14□□□□□ -1.43
TRIM59-201ENST00000309784 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
TRIM59-201ENST00000309784 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
TRIM59-201ENST00000309784 TMEM258P61165 79 aa6.13□□□□□ -1.43
TRIM59-201ENST00000309784 H7BZZ5 65 aa6.13□□□□□ -1.43
TRIM59-201ENST00000309784 FP248Q71RG6 208 aaPredicted RBP6.13□□□□□ -1.43
TRIM59-201ENST00000309784 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
TRIM59-201ENST00000309784 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
TRIM59-201ENST00000309784 H3BPC8 53 aa6.12□□□□□ -1.43
TRIM59-201ENST00000309784 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
TRIM59-201ENST00000309784 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
TRIM59-201ENST00000309784 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
TRIM59-201ENST00000309784 ATP11AUNQ6ZP68 121 aa6.09□□□□□ -1.43
TRIM59-201ENST00000309784 ZCCHC13Q8WW36 166 aaKnown RBP6.08□□□□□ -1.44
TRIM59-201ENST00000309784 FAT3Q8TDW7 4589 aa6.07□□□□□ -1.44
TRIM59-201ENST00000309784 HERC2O95714 4834 aa6.06□□□□□ -1.44
TRIM59-201ENST00000309784 ABCA13Q86UQ4 5058 aa6.06□□□□□ -1.44
TRIM59-201ENST00000309784 CYP4F30PQ9H0H9 118 aa6.03□□□□□ -1.44
TRIM59-201ENST00000309784 TNXBP22105 4242 aa6.03□□□□□ -1.44
TRIM59-201ENST00000309784 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
TRIM59-201ENST00000309784 C20orf166-AS1Q96NR2 134 aa6.02□□□□□ -1.45
TRIM59-201ENST00000309784 A8MUU9 505 aa6.02□□□□□ -1.45
TRIM59-201ENST00000309784 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
TRIM59-201ENST00000309784 ATP5EP56381 51 aaPredicted RBP6.01□□□□□ -1.45
TRIM59-201ENST00000309784 XP32Q5T750 250 aa6□□□□□ -1.45
TRIM59-201ENST00000309784 Q75L30 129 aa6□□□□□ -1.45
TRIM59-201ENST00000309784 HRES1P13985 223 aa5.98□□□□□ -1.45
TRIM59-201ENST00000309784 SPINK7P58062 85 aa5.98□□□□□ -1.45
TRIM59-201ENST00000309784 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
TRIM59-201ENST00000309784 C4orf26Q17RF5 130 aa5.96□□□□□ -1.46
TRIM59-201ENST00000309784 CHKB-CPT1BH3BT56 60 aa5.95□□□□□ -1.46
TRIM59-201ENST00000309784 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
TRIM59-201ENST00000309784 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
TRIM59-201ENST00000309784 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
TRIM59-201ENST00000309784 ACYP2P14621 99 aa5.89□□□□□ -1.47
TRIM59-201ENST00000309784 COA5Q86WW8 74 aa5.88□□□□□ -1.47
TRIM59-201ENST00000309784 MPLKIPQ8TAP9 179 aa5.88□□□□□ -1.47
TRIM59-201ENST00000309784 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
TRIM59-201ENST00000309784 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
TRIM59-201ENST00000309784 PCLOQ9Y6V0 5065 aa5.84□□□□□ -1.47
TRIM59-201ENST00000309784 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
TRIM59-201ENST00000309784 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
TRIM59-201ENST00000309784 LPAP08519 4548 aa5.81□□□□□ -1.48
TRIM59-201ENST00000309784 LRP2P98164 4655 aa5.81□□□□□ -1.48
TRIM59-201ENST00000309784 RBM12B-AS1Q9P1G2 102 aa5.78□□□□□ -1.48
TRIM59-201ENST00000309784 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
TRIM59-201ENST00000309784 A8MUN3 132 aa5.75□□□□□ -1.49
TRIM59-201ENST00000309784 HERC1Q15751 4861 aa5.75□□□□□ -1.49
TRIM59-201ENST00000309784 PSPHP1O15172 72 aa5.73□□□□□ -1.49
TRIM59-201ENST00000309784 SPTSSBQ8NFR3 76 aa5.71□□□□□ -1.5
TRIM59-201ENST00000309784 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
TRIM59-201ENST00000309784 V9GYY9 64 aa5.69□□□□□ -1.5
TRIM59-201ENST00000309784 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
TRIM59-201ENST00000309784 SEC61GP60059 68 aa5.66□□□□□ -1.5
TRIM59-201ENST00000309784 S4R3F8 94 aa5.65□□□□□ -1.5
TRIM59-201ENST00000309784 A0A1B0GU69 56 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 927.8 ms