RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 COX6CP09669 75 aa5.01□□□□□ -1.61
CHD6-201ENST00000309279 ATP5EP2Q5VTU8 51 aa5.01□□□□□ -1.61
CHD6-201ENST00000309279 A8MUU9 505 aa5.01□□□□□ -1.61
CHD6-201ENST00000309279 LINC00308Q8TCZ7 52 aa5.01□□□□□ -1.61
CHD6-201ENST00000309279 MYCBP2O75592 4640 aa5.01□□□□□ -1.61
CHD6-201ENST00000309279 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
CHD6-201ENST00000309279 FLG2Q5D862 2391 aaPredicted RBP4.99□□□□□ -1.61
CHD6-201ENST00000309279 C1orf137Q5JT78 98 aa4.99□□□□□ -1.61
CHD6-201ENST00000309279 P0C880 135 aa4.98□□□□□ -1.61
CHD6-201ENST00000309279 MIR22HGQ0VDD5 57 aa4.98□□□□□ -1.61
CHD6-201ENST00000309279 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
CHD6-201ENST00000309279 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
CHD6-201ENST00000309279 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 A0A087WSZ3 146 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 H7C2G1 150 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 IGLV7-43P04211 117 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 C20orf166-AS1Q96NR2 134 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 LOC101927531A0A1B0GV80 90 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 NCR3O14931 201 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 MUSTN1Q8IVN3 82 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 KCNQ1DNQ9H478 68 aa4.97□□□□□ -1.61
CHD6-201ENST00000309279 IGLV6-57P01721 117 aa4.96□□□□□ -1.62
CHD6-201ENST00000309279 ZNF861PO60384 105 aa4.95□□□□□ -1.62
CHD6-201ENST00000309279 SPRR1AP35321 89 aa4.95□□□□□ -1.62
CHD6-201ENST00000309279 FAT3Q8TDW7 4589 aa4.95□□□□□ -1.62
CHD6-201ENST00000309279 H3BPC8 53 aa4.94□□□□□ -1.62
CHD6-201ENST00000309279 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
CHD6-201ENST00000309279 KRTAP13-1Q8IUC0 172 aa4.94□□□□□ -1.62
CHD6-201ENST00000309279 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
CHD6-201ENST00000309279 BAALC-AS2P0C853 105 aa4.93□□□□□ -1.62
CHD6-201ENST00000309279 SMIM29Q86T20 159 aa4.93□□□□□ -1.62
CHD6-201ENST00000309279 SNURFQ9Y675 71 aa4.92□□□□□ -1.62
CHD6-201ENST00000309279 A0A087WVE0 104 aa4.9□□□□□ -1.62
CHD6-201ENST00000309279 TRBV7-4A0A0J9YYF1 115 aa4.9□□□□□ -1.62
CHD6-201ENST00000309279 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.62
CHD6-201ENST00000309279 PRLHP81277 87 aa4.9□□□□□ -1.62
CHD6-201ENST00000309279 IGLV7-46A0A075B6I9 117 aa4.9□□□□□ -1.63
CHD6-201ENST00000309279 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
CHD6-201ENST00000309279 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
CHD6-201ENST00000309279 Q8N377 158 aa4.89□□□□□ -1.63
CHD6-201ENST00000309279 KRTAP1-4P0C5Y4 121 aa4.88□□□□□ -1.63
CHD6-201ENST00000309279 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.88□□□□□ -1.63
CHD6-201ENST00000309279 Q6ZRX8 168 aa4.88□□□□□ -1.63
CHD6-201ENST00000309279 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
CHD6-201ENST00000309279 CFC1P0CG37 223 aa4.87□□□□□ -1.63
CHD6-201ENST00000309279 LINC00483Q53H64 154 aa4.87□□□□□ -1.63
CHD6-201ENST00000309279 CSAG1Q6PB30 78 aa4.87□□□□□ -1.63
CHD6-201ENST00000309279 Q9BRP9 147 aa4.87□□□□□ -1.63
CHD6-201ENST00000309279 TNXBP22105 4242 aa4.87□□□□□ -1.63
CHD6-201ENST00000309279 IGKV3D-7A0A0C4DH55 119 aa4.86□□□□□ -1.63
CHD6-201ENST00000309279 H3BQ85 93 aa4.86□□□□□ -1.63
CHD6-201ENST00000309279 HIGD2AQ9BW72 106 aa4.86□□□□□ -1.63
CHD6-201ENST00000309279 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
CHD6-201ENST00000309279 ELOF1P60002 83 aaKnown RBP4.86□□□□□ -1.63
CHD6-201ENST00000309279 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
CHD6-201ENST00000309279 TMEM254Q8TBM7 123 aa4.86□□□□□ -1.63
CHD6-201ENST00000309279 SMIM11BQ8TCY0 68 aa4.86□□□□□ -1.63
CHD6-201ENST00000309279 KRTAP10-8P60410 259 aa4.85□□□□□ -1.63
CHD6-201ENST00000309279 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
CHD6-201ENST00000309279 A0A1W2PNM2 257 aa4.84□□□□□ -1.63
CHD6-201ENST00000309279 COX7BP24311 80 aa4.84□□□□□ -1.63
CHD6-201ENST00000309279 HERC1Q15751 4861 aa4.84□□□□□ -1.63
CHD6-201ENST00000309279 SPRR4Q96PI1 79 aa4.83□□□□□ -1.64
CHD6-201ENST00000309279 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
CHD6-201ENST00000309279 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
CHD6-201ENST00000309279 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
CHD6-201ENST00000309279 Q1RN00 199 aa4.81□□□□□ -1.64
CHD6-201ENST00000309279 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CHD6-201ENST00000309279 LINC00575Q6W349 94 aa4.79□□□□□ -1.64
CHD6-201ENST00000309279 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
CHD6-201ENST00000309279 SPRR1BP22528 89 aa4.79□□□□□ -1.64
CHD6-201ENST00000309279 H0YGX0 51 aa4.78□□□□□ -1.64
CHD6-201ENST00000309279 ORMDL1Q9P0S3 153 aa4.78□□□□□ -1.64
CHD6-201ENST00000309279 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
CHD6-201ENST00000309279 DNAL4O96015 105 aa4.77□□□□□ -1.65
CHD6-201ENST00000309279 TYMSOSQ8TAI1 123 aa4.77□□□□□ -1.65
CHD6-201ENST00000309279 LINC00846Q9NV44 126 aa4.75□□□□□ -1.65
CHD6-201ENST00000309279 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
CHD6-201ENST00000309279 Q6ZQY7 126 aa4.74□□□□□ -1.65
CHD6-201ENST00000309279 A0A1B0GU33 70 aa4.73□□□□□ -1.65
CHD6-201ENST00000309279 SSBP3-AS1Q7Z2R9 100 aa4.73□□□□□ -1.65
CHD6-201ENST00000309279 DEFB105AQ8NG35 78 aa4.73□□□□□ -1.65
CHD6-201ENST00000309279 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
CHD6-201ENST00000309279 Q5W150 140 aa4.72□□□□□ -1.65
CHD6-201ENST00000309279 NREPQ16612 68 aa4.72□□□□□ -1.65
CHD6-201ENST00000309279 LINC00304Q8N9R0 145 aa4.72□□□□□ -1.65
CHD6-201ENST00000309279 DMAC1Q96GE9 116 aa4.72□□□□□ -1.65
CHD6-201ENST00000309279 OBSCN-AS1Q96MR7 158 aa4.72□□□□□ -1.65
CHD6-201ENST00000309279 LCE2BO14633 110 aa4.7□□□□□ -1.66
CHD6-201ENST00000309279 LINC01558Q9Y6Z2 57 aa4.7□□□□□ -1.66
CHD6-201ENST00000309279 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
CHD6-201ENST00000309279 SPINK1P00995 79 aa4.68□□□□□ -1.66
CHD6-201ENST00000309279 RPS29P62273 56 aaKnown RBP4.68□□□□□ -1.66
CHD6-201ENST00000309279 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
CHD6-201ENST00000309279 DEFB116Q30KQ4 102 aa4.65□□□□□ -1.66
CHD6-201ENST00000309279 LRP2P98164 4655 aa4.63□□□□□ -1.67
CHD6-201ENST00000309279 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms