RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
CKS1B-201ENST00000308987 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
CKS1B-201ENST00000308987 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 A0A087WTM6 91 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 A0A0U1RQV1 116 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 F8WEM9 126 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 KRTAP4-16G5E9R7 235 aaPredicted RBP3.08□□□□□ -1.92
CKS1B-201ENST00000308987 Q6ZRX8 168 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 Q8N377 158 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 C7orf33Q8WU49 177 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 RMI2Q96E14 147 aa3.08□□□□□ -1.92
CKS1B-201ENST00000308987 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
CKS1B-201ENST00000308987 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
CKS1B-201ENST00000308987 Q8NBF4 154 aa3.07□□□□□ -1.92
CKS1B-201ENST00000308987 SPRR4Q96PI1 79 aa3.07□□□□□ -1.92
CKS1B-201ENST00000308987 IGKV2D-24A0A075B6R9 120 aa3.06□□□□□ -1.92
CKS1B-201ENST00000308987 ETDCA0A1B0GVM5 59 aa3.06□□□□□ -1.92
CKS1B-201ENST00000308987 LRCOL1A6NCL2 159 aa3.06□□□□□ -1.92
CKS1B-201ENST00000308987 RPL37AP8A6NKH3 93 aa3.06□□□□□ -1.92
CKS1B-201ENST00000308987 KRTAP10-4P60372 401 aaPredicted RBP3.06□□□□□ -1.92
CKS1B-201ENST00000308987 SCXQ7RTU7 201 aa3.06□□□□□ -1.92
CKS1B-201ENST00000308987 SNURFQ9Y675 71 aa3.06□□□□□ -1.92
CKS1B-201ENST00000308987 LPAP08519 4548 aa3.06□□□□□ -1.92
CKS1B-201ENST00000308987 IGLV8-61A0A075B6I0 122 aa3.05□□□□□ -1.92
CKS1B-201ENST00000308987 A0A1W2PNM2 257 aa3.05□□□□□ -1.92
CKS1B-201ENST00000308987 C1orf137Q5JT78 98 aa3.05□□□□□ -1.92
CKS1B-201ENST00000308987 SERTAD4-AS1Q5TG53 156 aa3.05□□□□□ -1.92
CKS1B-201ENST00000308987 HRCT1Q6UXD1 115 aa3.05□□□□□ -1.92
CKS1B-201ENST00000308987 PRO0628Q9UI54 55 aa3.05□□□□□ -1.92
CKS1B-201ENST00000308987 Q9BRP9 147 aa3.04□□□□□ -1.92
CKS1B-201ENST00000308987 IGLV5-52A0A0A0MRZ9 124 aa3.03□□□□□ -1.92
CKS1B-201ENST00000308987 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
CKS1B-201ENST00000308987 Q6ZSA8 131 aa3.03□□□□□ -1.92
CKS1B-201ENST00000308987 FP248Q71RG6 208 aaPredicted RBP3.03□□□□□ -1.92
CKS1B-201ENST00000308987 MRPL55Q7Z7F7 128 aaKnown RBP3.03□□□□□ -1.92
CKS1B-201ENST00000308987 DEFB105AQ8NG35 78 aa3.03□□□□□ -1.92
CKS1B-201ENST00000308987 ZCCHC13Q8WW36 166 aaKnown RBP3.03□□□□□ -1.92
CKS1B-201ENST00000308987 H3BPC8 53 aa3.02□□□□□ -1.93
CKS1B-201ENST00000308987 NDUFB1O75438 58 aa3.02□□□□□ -1.93
CKS1B-201ENST00000308987 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
CKS1B-201ENST00000308987 Q8N9L7 120 aa3.02□□□□□ -1.93
CKS1B-201ENST00000308987 PKIGQ9Y2B9 76 aa3.02□□□□□ -1.93
CKS1B-201ENST00000308987 H0Y9J4 135 aa3.01□□□□□ -1.93
CKS1B-201ENST00000308987 SPRR1BP22528 89 aa3.01□□□□□ -1.93
CKS1B-201ENST00000308987 DSCR10P59022 87 aa3.01□□□□□ -1.93
CKS1B-201ENST00000308987 CNBPP62633 177 aaKnown RBP3.01□□□□□ -1.93
CKS1B-201ENST00000308987 C14orf177Q52M58 125 aa3.01□□□□□ -1.93
CKS1B-201ENST00000308987 SMIM29Q86T20 159 aa3.01□□□□□ -1.93
CKS1B-201ENST00000308987 KRTAP7-1Q8IUC3 87 aa3.01□□□□□ -1.93
CKS1B-201ENST00000308987 CYP4F30PQ9H0H9 118 aa3.01□□□□□ -1.93
CKS1B-201ENST00000308987 A0A0A0MQY5 61 aa3□□□□□ -1.93
CKS1B-201ENST00000308987 hDV103S1A0JD37 113 aa3□□□□□ -1.93
CKS1B-201ENST00000308987 HCG22E2RYF7 251 aa3□□□□□ -1.93
CKS1B-201ENST00000308987 UBE2BP63146 152 aa3□□□□□ -1.93
CKS1B-201ENST00000308987 ST20-AS1Q8NBB2 130 aa3□□□□□ -1.93
CKS1B-201ENST00000308987 HIGD2AQ9BW72 106 aa3□□□□□ -1.93
CKS1B-201ENST00000308987 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
CKS1B-201ENST00000308987 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
CKS1B-201ENST00000308987 Q1T7F1 81 aa2.99□□□□□ -1.93
CKS1B-201ENST00000308987 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.98□□□□□ -1.93
CKS1B-201ENST00000308987 K7EQZ3 153 aa2.98□□□□□ -1.93
CKS1B-201ENST00000308987 PSCAO43653 123 aa2.98□□□□□ -1.93
CKS1B-201ENST00000308987 MP68P56378 58 aa2.98□□□□□ -1.93
CKS1B-201ENST00000308987 IGFL1Q6UW32 110 aa2.98□□□□□ -1.93
CKS1B-201ENST00000308987 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
CKS1B-201ENST00000308987 LINC00474Q9P2X8 69 aa2.98□□□□□ -1.93
CKS1B-201ENST00000308987 V9GYY9 64 aa2.98□□□□□ -1.93
CKS1B-201ENST00000308987 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
CKS1B-201ENST00000308987 RPL37AP61513 92 aaKnown RBP2.96□□□□□ -1.94
CKS1B-201ENST00000308987 PRR15Q8IV56 129 aa2.96□□□□□ -1.94
CKS1B-201ENST00000308987 C1orf64Q8NEQ6 169 aa2.96□□□□□ -1.94
CKS1B-201ENST00000308987 A0A087WSZ3 146 aa2.95□□□□□ -1.94
CKS1B-201ENST00000308987 A0A096LNI7 61 aa2.95□□□□□ -1.94
CKS1B-201ENST00000308987 TRAV22A0A0B4J277 110 aa2.95□□□□□ -1.94
CKS1B-201ENST00000308987 PANO1I0J062 215 aa2.95□□□□□ -1.94
CKS1B-201ENST00000308987 UBE2AP49459 152 aa2.95□□□□□ -1.94
CKS1B-201ENST00000308987 FAM229BQ4G0N7 80 aa2.95□□□□□ -1.94
CKS1B-201ENST00000308987 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
CKS1B-201ENST00000308987 MUC2Q02817 5179 aa2.94□□□□□ -1.94
CKS1B-201ENST00000308987 A0A1W2PNN7 141 aa2.94□□□□□ -1.94
CKS1B-201ENST00000308987 A8MWP4 228 aa2.94□□□□□ -1.94
CKS1B-201ENST00000308987 C1orf195Q5TG92 126 aa2.94□□□□□ -1.94
CKS1B-201ENST00000308987 CASC2Q6XLA1 102 aa2.94□□□□□ -1.94
CKS1B-201ENST00000308987 C9orf163Q8N9P6 203 aa2.94□□□□□ -1.94
CKS1B-201ENST00000308987 PRLHP81277 87 aa2.93□□□□□ -1.94
CKS1B-201ENST00000308987 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
CKS1B-201ENST00000308987 TP53AIP1Q9HCN2 124 aa2.93□□□□□ -1.94
CKS1B-201ENST00000308987 H0Y9P7 68 aa2.92□□□□□ -1.94
CKS1B-201ENST00000308987 ASB16-AS1Q495Z4 193 aa2.92□□□□□ -1.94
CKS1B-201ENST00000308987 WFDC13Q8IUB5 93 aa2.92□□□□□ -1.94
CKS1B-201ENST00000308987 KRTAP13-1Q8IUC0 172 aa2.92□□□□□ -1.94
CKS1B-201ENST00000308987 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
CKS1B-201ENST00000308987 LIMD2Q9BT23 127 aa2.92□□□□□ -1.94
CKS1B-201ENST00000308987 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
CKS1B-201ENST00000308987 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
CKS1B-201ENST00000308987 MOBPQ13875 183 aa2.91□□□□□ -1.94
CKS1B-201ENST00000308987 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
CKS1B-201ENST00000308987 IGLV7-46A0A075B6I9 117 aa2.9□□□□□ -1.95
CKS1B-201ENST00000308987 MMP24-AS1A0A0U1RRL7 71 aa2.9□□□□□ -1.95
CKS1B-201ENST00000308987 LINC00483Q53H64 154 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms