RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 LOC400499M0QZD8 3231 aa5.79□□□□□ -1.48
TMOD3-201ENST00000308580 SPTBN5Q9NRC6 3674 aaKnown RBP5.78□□□□□ -1.48
TMOD3-201ENST00000308580 DMAC1Q96GE9 116 aa5.77□□□□□ -1.48
TMOD3-201ENST00000308580 S4R3F8 94 aa5.77□□□□□ -1.49
TMOD3-201ENST00000308580 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
TMOD3-201ENST00000308580 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
TMOD3-201ENST00000308580 USP34Q70CQ2 3546 aa5.74□□□□□ -1.49
TMOD3-201ENST00000308580 M0R2T5 61 aa5.72□□□□□ -1.49
TMOD3-201ENST00000308580 MYO15AQ9UKN7 3530 aa5.7□□□□□ -1.5
TMOD3-201ENST00000308580 KRTAP13-1Q8IUC0 172 aa5.69□□□□□ -1.5
TMOD3-201ENST00000308580 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
TMOD3-201ENST00000308580 TENM3Q9P273 2699 aa5.68□□□□□ -1.5
TMOD3-201ENST00000308580 R4GN34 69 aa5.68□□□□□ -1.5
TMOD3-201ENST00000308580 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
TMOD3-201ENST00000308580 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
TMOD3-201ENST00000308580 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
TMOD3-201ENST00000308580 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
TMOD3-201ENST00000308580 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
TMOD3-201ENST00000308580 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
TMOD3-201ENST00000308580 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
TMOD3-201ENST00000308580 M0QZ58 72 aa5.59□□□□□ -1.52
TMOD3-201ENST00000308580 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.52
TMOD3-201ENST00000308580 TENM1Q9UKZ4 2725 aa5.57□□□□□ -1.52
TMOD3-201ENST00000308580 DCHS1Q96JQ0 3298 aa5.56□□□□□ -1.52
TMOD3-201ENST00000308580 ROMO1P60602 79 aa5.55□□□□□ -1.52
TMOD3-201ENST00000308580 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
TMOD3-201ENST00000308580 RELNP78509 3460 aa5.52□□□□□ -1.52
TMOD3-201ENST00000308580 CELSR1Q9NYQ6 3014 aa5.51□□□□□ -1.53
TMOD3-201ENST00000308580 PKD1L1Q8TDX9 2849 aa5.5□□□□□ -1.53
TMOD3-201ENST00000308580 A8MU10 97 aa5.48□□□□□ -1.53
TMOD3-201ENST00000308580 TENM2Q9NT68 2774 aa5.48□□□□□ -1.53
TMOD3-201ENST00000308580 H3BS24 57 aa5.46□□□□□ -1.54
TMOD3-201ENST00000308580 KRTAP21-3Q3LHN1 58 aa5.45□□□□□ -1.54
TMOD3-201ENST00000308580 A6NN06 94 aa5.44□□□□□ -1.54
TMOD3-201ENST00000308580 PDZD2O15018 2839 aa5.43□□□□□ -1.54
TMOD3-201ENST00000308580 KRTAP1-4P0C5Y4 121 aa5.43□□□□□ -1.54
TMOD3-201ENST00000308580 WDFY3Q8IZQ1 3526 aa5.42□□□□□ -1.54
TMOD3-201ENST00000308580 A8MUU9 505 aa5.42□□□□□ -1.54
TMOD3-201ENST00000308580 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
TMOD3-201ENST00000308580 VWFP04275 2813 aa5.39□□□□□ -1.55
TMOD3-201ENST00000308580 TGP01266 2768 aa5.39□□□□□ -1.55
TMOD3-201ENST00000308580 FBN1P35555 2871 aaKnown RBP5.38□□□□□ -1.55
TMOD3-201ENST00000308580 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
TMOD3-201ENST00000308580 LAMA5O15230 3695 aa5.36□□□□□ -1.55
TMOD3-201ENST00000308580 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
TMOD3-201ENST00000308580 ASPMQ8IZT6 3477 aa5.33□□□□□ -1.56
TMOD3-201ENST00000308580 ZFHX4Q86UP3 3567 aa5.31□□□□□ -1.56
TMOD3-201ENST00000308580 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
TMOD3-201ENST00000308580 XP32Q5T750 250 aa5.29□□□□□ -1.56
TMOD3-201ENST00000308580 MUC3AQ02505 3323 aa5.29□□□□□ -1.56
TMOD3-201ENST00000308580 OTOGQ6ZRI0 2925 aa5.28□□□□□ -1.56
TMOD3-201ENST00000308580 KRTAP16-1A8MUX0 517 aa5.26□□□□□ -1.57
TMOD3-201ENST00000308580 SRRM2Q9UQ35 2752 aaKnown RBP5.25□□□□□ -1.57
TMOD3-201ENST00000308580 DMDP11532 3685 aa5.19□□□□□ -1.58
TMOD3-201ENST00000308580 H0YAA0 97 aa5.16□□□□□ -1.58
TMOD3-201ENST00000308580 CSMD1Q96PZ7 3565 aa5.16□□□□□ -1.58
TMOD3-201ENST00000308580 ZFHX3Q15911 3703 aa5.14□□□□□ -1.59
TMOD3-201ENST00000308580 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
TMOD3-201ENST00000308580 TNP1P09430 55 aa5.14□□□□□ -1.59
TMOD3-201ENST00000308580 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
TMOD3-201ENST00000308580 KRTAP13-3Q3SY46 172 aa5.13□□□□□ -1.59
TMOD3-201ENST00000308580 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
TMOD3-201ENST00000308580 NBPF19A0A087WUL8 3843 aa5.11□□□□□ -1.59
TMOD3-201ENST00000308580 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
TMOD3-201ENST00000308580 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
TMOD3-201ENST00000308580 FBN3Q75N90 2809 aa5.1□□□□□ -1.59
TMOD3-201ENST00000308580 P0C880 135 aa5.08□□□□□ -1.6
TMOD3-201ENST00000308580 KRTAP10-8P60410 259 aa5.07□□□□□ -1.6
TMOD3-201ENST00000308580 CUBNO60494 3623 aa5.06□□□□□ -1.6
TMOD3-201ENST00000308580 SVEP1Q4LDE5 3571 aa5.05□□□□□ -1.6
TMOD3-201ENST00000308580 CSMD2Q7Z408 3487 aa5.03□□□□□ -1.6
TMOD3-201ENST00000308580 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
TMOD3-201ENST00000308580 MEGF8Q7Z7M0 2845 aa4.97□□□□□ -1.61
TMOD3-201ENST00000308580 COL7A1Q02388 2944 aa4.97□□□□□ -1.61
TMOD3-201ENST00000308580 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
TMOD3-201ENST00000308580 ANK3Q12955 4377 aaKnown RBP4.94□□□□□ -1.62
TMOD3-201ENST00000308580 TRRAPQ9Y4A5 3859 aa4.92□□□□□ -1.62
TMOD3-201ENST00000308580 SPENQ96T58 3664 aaKnown RBP4.9□□□□□ -1.62
TMOD3-201ENST00000308580 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
TMOD3-201ENST00000308580 KRTAP12-2P59991 146 aa4.85□□□□□ -1.63
TMOD3-201ENST00000308580 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
TMOD3-201ENST00000308580 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
TMOD3-201ENST00000308580 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
TMOD3-201ENST00000308580 KRTAP13-4Q3LI77 160 aa4.73□□□□□ -1.65
TMOD3-201ENST00000308580 BSNQ9UPA5 3926 aa4.71□□□□□ -1.65
TMOD3-201ENST00000308580 MT1HL1P0DM35 61 aa4.7□□□□□ -1.66
TMOD3-201ENST00000308580 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
TMOD3-201ENST00000308580 HUWE1Q7Z6Z7 4374 aaKnown RBP4.61□□□□□ -1.67
TMOD3-201ENST00000308580 VPS13CQ709C8 3753 aa4.6□□□□□ -1.67
TMOD3-201ENST00000308580 KRTAP3-3Q9BYR6 98 aa4.59□□□□□ -1.68
TMOD3-201ENST00000308580 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
TMOD3-201ENST00000308580 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
TMOD3-201ENST00000308580 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
TMOD3-201ENST00000308580 DNAH5Q8TE73 4624 aa4.46□□□□□ -1.69
TMOD3-201ENST00000308580 DNHD1Q96M86 4753 aa4.44□□□□□ -1.7
TMOD3-201ENST00000308580 ZNF469Q96JG9 3925 aaPredicted RBP4.44□□□□□ -1.7
TMOD3-201ENST00000308580 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
TMOD3-201ENST00000308580 DNAH9Q9NYC9 4486 aa4.42□□□□□ -1.7
TMOD3-201ENST00000308580 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
TMOD3-201ENST00000308580 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms