RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 H3BPC8 53 aa6.5□□□□□ -1.37
MUC4-201ENST00000308466 MRPL34Q9BQ48 92 aaKnown RBP6.5□□□□□ -1.37
MUC4-201ENST00000308466 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
MUC4-201ENST00000308466 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
MUC4-201ENST00000308466 ANK2Q01484 3957 aa6.49□□□□□ -1.37
MUC4-201ENST00000308466 Q6ZRN7 208 aaPredicted RBP6.48□□□□□ -1.37
MUC4-201ENST00000308466 WWC2-AS2Q96NR7 200 aa6.48□□□□□ -1.37
MUC4-201ENST00000308466 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
MUC4-201ENST00000308466 SPINK1P00995 79 aa6.46□□□□□ -1.37
MUC4-201ENST00000308466 COL7A1Q02388 2944 aa6.46□□□□□ -1.38
MUC4-201ENST00000308466 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
MUC4-201ENST00000308466 PLAC8Q9NZF1 115 aa6.45□□□□□ -1.38
MUC4-201ENST00000308466 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
MUC4-201ENST00000308466 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
MUC4-201ENST00000308466 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
MUC4-201ENST00000308466 DMBT1Q9UGM3 2413 aaPredicted RBP6.43□□□□□ -1.38
MUC4-201ENST00000308466 SSBP3-AS1Q7Z2R9 100 aa6.43□□□□□ -1.38
MUC4-201ENST00000308466 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
MUC4-201ENST00000308466 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
MUC4-201ENST00000308466 KRTAP29-1A8MX34 341 aaPredicted RBP6.41□□□□□ -1.38
MUC4-201ENST00000308466 HRES1P13985 223 aa6.41□□□□□ -1.38
MUC4-201ENST00000308466 LCE6AA0A183 80 aa6.41□□□□□ -1.38
MUC4-201ENST00000308466 TYMSOSQ8TAI1 123 aa6.41□□□□□ -1.38
MUC4-201ENST00000308466 KRTAP10-2P60368 255 aa6.4□□□□□ -1.38
MUC4-201ENST00000308466 UQCR11O14957 56 aa6.4□□□□□ -1.38
MUC4-201ENST00000308466 Q6ZR54 194 aa6.4□□□□□ -1.38
MUC4-201ENST00000308466 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
MUC4-201ENST00000308466 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
MUC4-201ENST00000308466 MEGF8Q7Z7M0 2845 aa6.38□□□□□ -1.39
MUC4-201ENST00000308466 ACYP2P14621 99 aa6.38□□□□□ -1.39
MUC4-201ENST00000308466 KRTAP13-1Q8IUC0 172 aa6.37□□□□□ -1.39
MUC4-201ENST00000308466 CSMD3Q7Z407 3707 aa6.36□□□□□ -1.39
MUC4-201ENST00000308466 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
MUC4-201ENST00000308466 A0A087X002 238 aa6.36□□□□□ -1.39
MUC4-201ENST00000308466 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
MUC4-201ENST00000308466 FBN3Q75N90 2809 aa6.35□□□□□ -1.39
MUC4-201ENST00000308466 LINC00483Q53H64 154 aa6.35□□□□□ -1.39
MUC4-201ENST00000308466 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
MUC4-201ENST00000308466 Q96NJ1 140 aa6.34□□□□□ -1.39
MUC4-201ENST00000308466 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
MUC4-201ENST00000308466 KRTAP10-1P60331 282 aa6.33□□□□□ -1.4
MUC4-201ENST00000308466 HUWE1Q7Z6Z7 4374 aaKnown RBP6.29□□□□□ -1.4
MUC4-201ENST00000308466 CMYA5Q8N3K9 4069 aa6.27□□□□□ -1.41
MUC4-201ENST00000308466 K7ERS5 55 aa6.26□□□□□ -1.41
MUC4-201ENST00000308466 LINC00304Q8N9R0 145 aa6.26□□□□□ -1.41
MUC4-201ENST00000308466 C9orf92A6NGG3 77 aa6.25□□□□□ -1.41
MUC4-201ENST00000308466 Q5W150 140 aa6.24□□□□□ -1.41
MUC4-201ENST00000308466 LYSTQ99698 3801 aa6.2□□□□□ -1.42
MUC4-201ENST00000308466 PRKDCP78527 4128 aaKnown RBP6.2□□□□□ -1.42
MUC4-201ENST00000308466 DNAH9Q9NYC9 4486 aa6.2□□□□□ -1.42
MUC4-201ENST00000308466 A0A0A0MQY5 61 aa6.19□□□□□ -1.42
MUC4-201ENST00000308466 ROMO1P60602 79 aa6.19□□□□□ -1.42
MUC4-201ENST00000308466 Q8N1X5 172 aa6.18□□□□□ -1.42
MUC4-201ENST00000308466 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
MUC4-201ENST00000308466 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
MUC4-201ENST00000308466 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
MUC4-201ENST00000308466 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
MUC4-201ENST00000308466 DNAH10Q8IVF4 4471 aa6.12□□□□□ -1.43
MUC4-201ENST00000308466 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
MUC4-201ENST00000308466 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
MUC4-201ENST00000308466 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
MUC4-201ENST00000308466 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
MUC4-201ENST00000308466 Q6ZSA8 131 aa6.05□□□□□ -1.44
MUC4-201ENST00000308466 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
MUC4-201ENST00000308466 DNAH7Q8WXX0 4024 aa6.04□□□□□ -1.44
MUC4-201ENST00000308466 KRTAP16-1A8MUX0 517 aa6.03□□□□□ -1.44
MUC4-201ENST00000308466 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
MUC4-201ENST00000308466 A8MUU9 505 aa6.03□□□□□ -1.44
MUC4-201ENST00000308466 KMT2AQ03164 3969 aa6□□□□□ -1.45
MUC4-201ENST00000308466 A0A0D9SG42 100 aa5.97□□□□□ -1.45
MUC4-201ENST00000308466 A0A1B0GU33 70 aa5.96□□□□□ -1.46
MUC4-201ENST00000308466 DNAH1Q9P2D7 4330 aa5.9□□□□□ -1.47
MUC4-201ENST00000308466 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.47
MUC4-201ENST00000308466 P0C880 135 aa5.89□□□□□ -1.47
MUC4-201ENST00000308466 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
MUC4-201ENST00000308466 Q5VSD8 79 aa5.88□□□□□ -1.47
MUC4-201ENST00000308466 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
MUC4-201ENST00000308466 VPS13DQ5THJ4 4388 aa5.87□□□□□ -1.47
MUC4-201ENST00000308466 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
MUC4-201ENST00000308466 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
MUC4-201ENST00000308466 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
MUC4-201ENST00000308466 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
MUC4-201ENST00000308466 HYDINQ4G0P3 5121 aa5.8□□□□□ -1.48
MUC4-201ENST00000308466 H0YAA0 97 aa5.79□□□□□ -1.48
MUC4-201ENST00000308466 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
MUC4-201ENST00000308466 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
MUC4-201ENST00000308466 DYNC2H1Q8NCM8 4307 aaKnown RBP5.76□□□□□ -1.49
MUC4-201ENST00000308466 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
MUC4-201ENST00000308466 DNAH8Q96JB1 4490 aa5.72□□□□□ -1.49
MUC4-201ENST00000308466 A0A1B0GVY2 172 aa5.71□□□□□ -1.49
MUC4-201ENST00000308466 DNAH17Q9UFH2 4485 aa5.71□□□□□ -1.49
MUC4-201ENST00000308466 FRAS1Q86XX4 4008 aa5.71□□□□□ -1.5
MUC4-201ENST00000308466 J3QL48 77 aa5.7□□□□□ -1.5
MUC4-201ENST00000308466 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
MUC4-201ENST00000308466 KMT2CQ8NEZ4 4911 aaKnown RBP5.7□□□□□ -1.5
MUC4-201ENST00000308466 LRP1BQ9NZR2 4599 aa5.69□□□□□ -1.5
MUC4-201ENST00000308466 S4R3F8 94 aa5.69□□□□□ -1.5
MUC4-201ENST00000308466 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
MUC4-201ENST00000308466 DNAH5Q8TE73 4624 aa5.67□□□□□ -1.5
MUC4-201ENST00000308466 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms