RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 A8MUN3 132 aa4.9□□□□□ -1.63
SNRPD1-201ENST00000300413 OCR1Q9BZK8 76 aa4.9□□□□□ -1.63
SNRPD1-201ENST00000300413 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
SNRPD1-201ENST00000300413 DMBT1Q9UGM3 2413 aaPredicted RBP4.89□□□□□ -1.63
SNRPD1-201ENST00000300413 TGP01266 2768 aa4.89□□□□□ -1.63
SNRPD1-201ENST00000300413 A0A0U1RQV1 116 aa4.88□□□□□ -1.63
SNRPD1-201ENST00000300413 KRTAP11-1Q8IUC1 163 aa4.87□□□□□ -1.63
SNRPD1-201ENST00000300413 A0A1B0GU69 56 aa4.87□□□□□ -1.63
SNRPD1-201ENST00000300413 A0A087X002 238 aa4.87□□□□□ -1.63
SNRPD1-201ENST00000300413 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
SNRPD1-201ENST00000300413 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
SNRPD1-201ENST00000300413 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
SNRPD1-201ENST00000300413 COA5Q86WW8 74 aa4.84□□□□□ -1.63
SNRPD1-201ENST00000300413 H7BZZ5 65 aa4.82□□□□□ -1.64
SNRPD1-201ENST00000300413 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
SNRPD1-201ENST00000300413 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
SNRPD1-201ENST00000300413 A0A1B0GVY2 172 aa4.78□□□□□ -1.64
SNRPD1-201ENST00000300413 Q5W150 140 aa4.78□□□□□ -1.64
SNRPD1-201ENST00000300413 FLG2Q5D862 2391 aaPredicted RBP4.77□□□□□ -1.65
SNRPD1-201ENST00000300413 PSPHP1O15172 72 aa4.76□□□□□ -1.65
SNRPD1-201ENST00000300413 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
SNRPD1-201ENST00000300413 HRES1P13985 223 aa4.76□□□□□ -1.65
SNRPD1-201ENST00000300413 SPINK7P58062 85 aa4.75□□□□□ -1.65
SNRPD1-201ENST00000300413 TRRAPQ9Y4A5 3859 aa4.75□□□□□ -1.65
SNRPD1-201ENST00000300413 Q75L30 129 aa4.74□□□□□ -1.65
SNRPD1-201ENST00000300413 VPS13CQ709C8 3753 aa4.74□□□□□ -1.65
SNRPD1-201ENST00000300413 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
SNRPD1-201ENST00000300413 KRTAP1-4P0C5Y4 121 aa4.73□□□□□ -1.65
SNRPD1-201ENST00000300413 UQCR11O14957 56 aa4.72□□□□□ -1.65
SNRPD1-201ENST00000300413 Q8N9P0 234 aaPredicted RBP4.71□□□□□ -1.65
SNRPD1-201ENST00000300413 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
SNRPD1-201ENST00000300413 C4orf26Q17RF5 130 aa4.7□□□□□ -1.66
SNRPD1-201ENST00000300413 S4R3F8 94 aa4.68□□□□□ -1.66
SNRPD1-201ENST00000300413 RPL37P61927 97 aaKnown RBP4.68□□□□□ -1.66
SNRPD1-201ENST00000300413 ZNF469Q96JG9 3925 aaPredicted RBP4.66□□□□□ -1.66
SNRPD1-201ENST00000300413 DMAC1Q96GE9 116 aa4.65□□□□□ -1.67
SNRPD1-201ENST00000300413 M0R2T5 61 aa4.64□□□□□ -1.67
SNRPD1-201ENST00000300413 A8MUU9 505 aa4.64□□□□□ -1.67
SNRPD1-201ENST00000300413 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SNRPD1-201ENST00000300413 C20orf166-AS1Q96NR2 134 aa4.64□□□□□ -1.67
SNRPD1-201ENST00000300413 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
SNRPD1-201ENST00000300413 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
SNRPD1-201ENST00000300413 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
SNRPD1-201ENST00000300413 Q1T7F1 81 aa4.61□□□□□ -1.67
SNRPD1-201ENST00000300413 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
SNRPD1-201ENST00000300413 KRTAP10-8P60410 259 aa4.59□□□□□ -1.68
SNRPD1-201ENST00000300413 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
SNRPD1-201ENST00000300413 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
SNRPD1-201ENST00000300413 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
SNRPD1-201ENST00000300413 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
SNRPD1-201ENST00000300413 A0A1B0GU33 70 aa4.56□□□□□ -1.68
SNRPD1-201ENST00000300413 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
SNRPD1-201ENST00000300413 XP32Q5T750 250 aa4.53□□□□□ -1.68
SNRPD1-201ENST00000300413 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
SNRPD1-201ENST00000300413 KRTAP13-3Q3SY46 172 aa4.49□□□□□ -1.69
SNRPD1-201ENST00000300413 R4GN34 69 aa4.49□□□□□ -1.69
SNRPD1-201ENST00000300413 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
SNRPD1-201ENST00000300413 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
SNRPD1-201ENST00000300413 AKAP9Q99996 3911 aa4.48□□□□□ -1.69
SNRPD1-201ENST00000300413 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.69
SNRPD1-201ENST00000300413 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.69
SNRPD1-201ENST00000300413 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
SNRPD1-201ENST00000300413 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
SNRPD1-201ENST00000300413 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
SNRPD1-201ENST00000300413 A0A0D9SG42 100 aa4.44□□□□□ -1.7
SNRPD1-201ENST00000300413 ALMS1Q8TCU4 4167 aa4.44□□□□□ -1.7
SNRPD1-201ENST00000300413 MEGF8Q7Z7M0 2845 aa4.41□□□□□ -1.7
SNRPD1-201ENST00000300413 ADM2Q7Z4H4 148 aa4.4□□□□□ -1.7
SNRPD1-201ENST00000300413 M0QZ58 72 aa4.39□□□□□ -1.71
SNRPD1-201ENST00000300413 LCE2BO14633 110 aa4.39□□□□□ -1.71
SNRPD1-201ENST00000300413 Q5VV11 94 aa4.38□□□□□ -1.71
SNRPD1-201ENST00000300413 LCA10Q71F78 164 aa4.38□□□□□ -1.71
SNRPD1-201ENST00000300413 DNAH9Q9NYC9 4486 aa4.37□□□□□ -1.71
SNRPD1-201ENST00000300413 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
SNRPD1-201ENST00000300413 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
SNRPD1-201ENST00000300413 KRTAP10-4P60372 401 aaPredicted RBP4.34□□□□□ -1.72
SNRPD1-201ENST00000300413 CSMD3Q7Z407 3707 aa4.33□□□□□ -1.72
SNRPD1-201ENST00000300413 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
SNRPD1-201ENST00000300413 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
SNRPD1-201ENST00000300413 SPATA8Q6RVD6 105 aa4.29□□□□□ -1.72
SNRPD1-201ENST00000300413 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
SNRPD1-201ENST00000300413 DNHD1Q96M86 4753 aa4.28□□□□□ -1.72
SNRPD1-201ENST00000300413 ANK2Q01484 3957 aa4.23□□□□□ -1.73
SNRPD1-201ENST00000300413 ROMO1P60602 79 aa4.22□□□□□ -1.73
SNRPD1-201ENST00000300413 VPS13DQ5THJ4 4388 aa4.19□□□□□ -1.74
SNRPD1-201ENST00000300413 DNAH10Q8IVF4 4471 aa4.18□□□□□ -1.74
SNRPD1-201ENST00000300413 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
SNRPD1-201ENST00000300413 DNAH1Q9P2D7 4330 aa4.18□□□□□ -1.74
SNRPD1-201ENST00000300413 DNAH11Q96DT5 4516 aa4.16□□□□□ -1.74
SNRPD1-201ENST00000300413 H0YAA0 97 aa4.15□□□□□ -1.75
SNRPD1-201ENST00000300413 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
SNRPD1-201ENST00000300413 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
SNRPD1-201ENST00000300413 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
SNRPD1-201ENST00000300413 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
SNRPD1-201ENST00000300413 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
SNRPD1-201ENST00000300413 DNAH17Q9UFH2 4485 aa4.1□□□□□ -1.75
SNRPD1-201ENST00000300413 A8MU10 97 aa4.09□□□□□ -1.75
SNRPD1-201ENST00000300413 DNAH5Q8TE73 4624 aa4.08□□□□□ -1.76
SNRPD1-201ENST00000300413 TNP1P09430 55 aa4.07□□□□□ -1.76
SNRPD1-201ENST00000300413 DNAH6Q9C0G6 4158 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms