RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
NCKIPSD-201ENST00000294129 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
NCKIPSD-201ENST00000294129 A0A1B0GVX0 72 aa9.35□□□□□ -0.91
NCKIPSD-201ENST00000294129 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
NCKIPSD-201ENST00000294129 A8MUN3 132 aa9.33□□□□□ -0.92
NCKIPSD-201ENST00000294129 KRTAP10-1P60331 282 aa9.33□□□□□ -0.92
NCKIPSD-201ENST00000294129 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
NCKIPSD-201ENST00000294129 SPANXA2-OT1Q8N9U9 137 aa9.27□□□□□ -0.93
NCKIPSD-201ENST00000294129 MRPL34Q9BQ48 92 aaKnown RBP9.27□□□□□ -0.93
NCKIPSD-201ENST00000294129 H3BPC8 53 aa9.26□□□□□ -0.93
NCKIPSD-201ENST00000294129 A8MU10 97 aa9.25□□□□□ -0.93
NCKIPSD-201ENST00000294129 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
NCKIPSD-201ENST00000294129 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
NCKIPSD-201ENST00000294129 V9GYY9 64 aa9.24□□□□□ -0.93
NCKIPSD-201ENST00000294129 PKD1P98161 4303 aa9.23□□□□□ -0.93
NCKIPSD-201ENST00000294129 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
NCKIPSD-201ENST00000294129 Q5VV11 94 aa9.23□□□□□ -0.93
NCKIPSD-201ENST00000294129 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
NCKIPSD-201ENST00000294129 VPS13BQ7Z7G8 4022 aa9.21□□□□□ -0.94
NCKIPSD-201ENST00000294129 CD164Q04900 197 aa9.21□□□□□ -0.94
NCKIPSD-201ENST00000294129 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.94
NCKIPSD-201ENST00000294129 SSBP3-AS1Q7Z2R9 100 aa9.2□□□□□ -0.94
NCKIPSD-201ENST00000294129 CHKB-CPT1BH3BT56 60 aa9.19□□□□□ -0.94
NCKIPSD-201ENST00000294129 RETNLBQ9BQ08 111 aa9.19□□□□□ -0.94
NCKIPSD-201ENST00000294129 PRR15LQ9BU68 103 aa9.19□□□□□ -0.94
NCKIPSD-201ENST00000294129 Q6ZSA8 131 aa9.18□□□□□ -0.94
NCKIPSD-201ENST00000294129 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
NCKIPSD-201ENST00000294129 COA5Q86WW8 74 aa9.18□□□□□ -0.94
NCKIPSD-201ENST00000294129 Q5W150 140 aa9.16□□□□□ -0.94
NCKIPSD-201ENST00000294129 LIMD2Q9BT23 127 aa9.15□□□□□ -0.94
NCKIPSD-201ENST00000294129 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.94
NCKIPSD-201ENST00000294129 PMAIP1Q13794 54 aa9.14□□□□□ -0.95
NCKIPSD-201ENST00000294129 PLA2G1BP04054 148 aaKnown RBP9.1□□□□□ -0.95
NCKIPSD-201ENST00000294129 LINC00313P59037 77 aa9.1□□□□□ -0.95
NCKIPSD-201ENST00000294129 KRTAP1-4P0C5Y4 121 aa9.09□□□□□ -0.95
NCKIPSD-201ENST00000294129 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
NCKIPSD-201ENST00000294129 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
NCKIPSD-201ENST00000294129 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
NCKIPSD-201ENST00000294129 A6NED7 52 aa9.06□□□□□ -0.96
NCKIPSD-201ENST00000294129 SEC61GP60059 68 aa9.05□□□□□ -0.96
NCKIPSD-201ENST00000294129 TYMSOSQ8TAI1 123 aa9.05□□□□□ -0.96
NCKIPSD-201ENST00000294129 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
NCKIPSD-201ENST00000294129 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
NCKIPSD-201ENST00000294129 SACSQ9NZJ4 4579 aa9.04□□□□□ -0.96
NCKIPSD-201ENST00000294129 LCA10Q71F78 164 aa9.04□□□□□ -0.96
NCKIPSD-201ENST00000294129 Q75L30 129 aa9.03□□□□□ -0.96
NCKIPSD-201ENST00000294129 LOC101927531A0A1B0GV80 90 aa9.02□□□□□ -0.97
NCKIPSD-201ENST00000294129 HRES1P13985 223 aa9□□□□□ -0.97
NCKIPSD-201ENST00000294129 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
NCKIPSD-201ENST00000294129 PRR26Q8N8Z3 221 aa9□□□□□ -0.97
NCKIPSD-201ENST00000294129 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
NCKIPSD-201ENST00000294129 FAT1Q14517 4588 aa8.95□□□□□ -0.98
NCKIPSD-201ENST00000294129 FAM229AH3BQW9 127 aa8.94□□□□□ -0.98
NCKIPSD-201ENST00000294129 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
NCKIPSD-201ENST00000294129 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
NCKIPSD-201ENST00000294129 IGKV2-30P06310 120 aa8.93□□□□□ -0.98
NCKIPSD-201ENST00000294129 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
NCKIPSD-201ENST00000294129 KRTAP21-3Q3LHN1 58 aa8.92□□□□□ -0.98
NCKIPSD-201ENST00000294129 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
NCKIPSD-201ENST00000294129 SPINK7P58062 85 aa8.9□□□□□ -0.98
NCKIPSD-201ENST00000294129 CDC42SE1Q9NRR8 79 aa8.9□□□□□ -0.98
NCKIPSD-201ENST00000294129 SPINK1P00995 79 aa8.9□□□□□ -0.99
NCKIPSD-201ENST00000294129 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.99
NCKIPSD-201ENST00000294129 KTN1-AS1Q86SY8 53 aa8.85□□□□□ -0.99
NCKIPSD-201ENST00000294129 ACYP2P14621 99 aa8.84□□□□□ -0.99
NCKIPSD-201ENST00000294129 A6NN06 94 aa8.83□□□□□ -1
NCKIPSD-201ENST00000294129 C9orf92A6NGG3 77 aa8.82□□□□□ -1
NCKIPSD-201ENST00000294129 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
NCKIPSD-201ENST00000294129 APOBP04114 4563 aaKnown RBP8.79□□□□□ -1
NCKIPSD-201ENST00000294129 A0A1B0GVY2 172 aa8.79□□□□□ -1
NCKIPSD-201ENST00000294129 DMAC1Q96GE9 116 aa8.79□□□□□ -1
NCKIPSD-201ENST00000294129 C7orf65Q6ZTY9 151 aa8.74□□□□□ -1.01
NCKIPSD-201ENST00000294129 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
NCKIPSD-201ENST00000294129 RYR2Q92736 4967 aa8.74□□□□□ -1.01
NCKIPSD-201ENST00000294129 Q8N1X5 172 aa8.71□□□□□ -1.01
NCKIPSD-201ENST00000294129 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
NCKIPSD-201ENST00000294129 FLG2Q5D862 2391 aaPredicted RBP8.68□□□□□ -1.02
NCKIPSD-201ENST00000294129 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
NCKIPSD-201ENST00000294129 A0A1B0GU69 56 aa8.65□□□□□ -1.02
NCKIPSD-201ENST00000294129 RPS29P62273 56 aaKnown RBP8.65□□□□□ -1.02
NCKIPSD-201ENST00000294129 LRP1Q07954 4544 aaKnown RBP8.62□□□□□ -1.03
NCKIPSD-201ENST00000294129 PKHD1L1Q86WI1 4243 aa8.61□□□□□ -1.03
NCKIPSD-201ENST00000294129 PRAC1Q96KF2 57 aa8.55□□□□□ -1.04
NCKIPSD-201ENST00000294129 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
NCKIPSD-201ENST00000294129 A8MUU9 505 aa8.53□□□□□ -1.04
NCKIPSD-201ENST00000294129 ADM2Q7Z4H4 148 aa8.53□□□□□ -1.04
NCKIPSD-201ENST00000294129 Q5VSD8 79 aa8.51□□□□□ -1.05
NCKIPSD-201ENST00000294129 SPATA8Q6RVD6 105 aa8.51□□□□□ -1.05
NCKIPSD-201ENST00000294129 MIR22HGQ0VDD5 57 aa8.5□□□□□ -1.05
NCKIPSD-201ENST00000294129 UQCR11O14957 56 aa8.5□□□□□ -1.05
NCKIPSD-201ENST00000294129 RYR3Q15413 4870 aa8.49□□□□□ -1.05
NCKIPSD-201ENST00000294129 HSPG2P98160 4391 aa8.48□□□□□ -1.05
NCKIPSD-201ENST00000294129 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
NCKIPSD-201ENST00000294129 TNXBP22105 4242 aa8.44□□□□□ -1.06
NCKIPSD-201ENST00000294129 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
NCKIPSD-201ENST00000294129 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.06
NCKIPSD-201ENST00000294129 KIAA1109Q2LD37 5005 aa8.39□□□□□ -1.07
NCKIPSD-201ENST00000294129 KRTAP17-1Q9BYP8 105 aa8.39□□□□□ -1.07
NCKIPSD-201ENST00000294129 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
NCKIPSD-201ENST00000294129 RYR1P21817 5038 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 267.6 ms