RNA–Protein interactions for RNA: ENST00000293618.12

LARP4-201, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 1 (best) BASIC

Gene LARP4, Length 6,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-201ENST00000293618 COL12A1Q99715 3063 aa7.52□□□□□ -1.21
LARP4-201ENST00000293618 HIVEP1P15822 2718 aa7.52□□□□□ -1.21
LARP4-201ENST00000293618 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
LARP4-201ENST00000293618 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
LARP4-201ENST00000293618 CELSR2Q9HCU4 2923 aa7.49□□□□□ -1.21
LARP4-201ENST00000293618 BOD1L1Q8NFC6 3051 aa7.48□□□□□ -1.21
LARP4-201ENST00000293618 ZANQ9Y493 2812 aa7.48□□□□□ -1.21
LARP4-201ENST00000293618 ZZEF1O43149 2961 aa7.46□□□□□ -1.21
LARP4-201ENST00000293618 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
LARP4-201ENST00000293618 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
LARP4-201ENST00000293618 H0YAA0 97 aa7.43□□□□□ -1.22
LARP4-201ENST00000293618 DCHS2Q6V1P9 2916 aa7.38□□□□□ -1.23
LARP4-201ENST00000293618 TNRC18O15417 2968 aaPredicted RBP7.38□□□□□ -1.23
LARP4-201ENST00000293618 DNAH14Q0VDD8 3507 aa7.38□□□□□ -1.23
LARP4-201ENST00000293618 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
LARP4-201ENST00000293618 Q5VSD8 79 aa7.36□□□□□ -1.23
LARP4-201ENST00000293618 HRNRQ86YZ3 2850 aaPredicted RBP7.35□□□□□ -1.23
LARP4-201ENST00000293618 KRTAP13-3Q3SY46 172 aa7.34□□□□□ -1.23
LARP4-201ENST00000293618 CFAP47Q6ZTR5 3102 aa7.32□□□□□ -1.24
LARP4-201ENST00000293618 NF1P21359 2839 aa7.31□□□□□ -1.24
LARP4-201ENST00000293618 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
LARP4-201ENST00000293618 SZT2Q5T011 3432 aa7.28□□□□□ -1.24
LARP4-201ENST00000293618 FBN2P35556 2912 aa7.27□□□□□ -1.25
LARP4-201ENST00000293618 COL6A3P12111 3177 aa7.26□□□□□ -1.25
LARP4-201ENST00000293618 M0R2T5 61 aa7.26□□□□□ -1.25
LARP4-201ENST00000293618 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
LARP4-201ENST00000293618 P0C880 135 aa7.26□□□□□ -1.25
LARP4-201ENST00000293618 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
LARP4-201ENST00000293618 TENM4Q6N022 2769 aa7.17□□□□□ -1.26
LARP4-201ENST00000293618 REV3LO60673 3130 aa7.17□□□□□ -1.26
LARP4-201ENST00000293618 TNP1P09430 55 aa7.17□□□□□ -1.26
LARP4-201ENST00000293618 DMXL1Q9Y485 3027 aa7.17□□□□□ -1.26
LARP4-201ENST00000293618 MXRA5Q9NR99 2828 aa7.16□□□□□ -1.26
LARP4-201ENST00000293618 TGP01266 2768 aa7.16□□□□□ -1.26
LARP4-201ENST00000293618 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
LARP4-201ENST00000293618 EYSQ5T1H1 3165 aa7.1□□□□□ -1.27
LARP4-201ENST00000293618 SPEGQ15772 3267 aa7.02□□□□□ -1.29
LARP4-201ENST00000293618 XP32Q5T750 250 aa7.02□□□□□ -1.29
LARP4-201ENST00000293618 LOC400499M0QZD8 3231 aa7.01□□□□□ -1.29
LARP4-201ENST00000293618 CRYBG3Q68DQ2 2970 aa7.01□□□□□ -1.29
LARP4-201ENST00000293618 PDZD2O15018 2839 aa6.96□□□□□ -1.3
LARP4-201ENST00000293618 CELSR1Q9NYQ6 3014 aa6.93□□□□□ -1.3
LARP4-201ENST00000293618 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
LARP4-201ENST00000293618 TENM1Q9UKZ4 2725 aa6.91□□□□□ -1.3
LARP4-201ENST00000293618 USP34Q70CQ2 3546 aa6.89□□□□□ -1.31
LARP4-201ENST00000293618 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
LARP4-201ENST00000293618 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
LARP4-201ENST00000293618 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
LARP4-201ENST00000293618 TENM2Q9NT68 2774 aa6.8□□□□□ -1.32
LARP4-201ENST00000293618 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
LARP4-201ENST00000293618 SPTBN5Q9NRC6 3674 aaKnown RBP6.78□□□□□ -1.32
LARP4-201ENST00000293618 MYO15AQ9UKN7 3530 aa6.77□□□□□ -1.33
LARP4-201ENST00000293618 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
LARP4-201ENST00000293618 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
LARP4-201ENST00000293618 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
LARP4-201ENST00000293618 VWFP04275 2813 aa6.69□□□□□ -1.34
LARP4-201ENST00000293618 KRTAP21-3Q3LHN1 58 aa6.68□□□□□ -1.34
LARP4-201ENST00000293618 DCHS1Q96JQ0 3298 aa6.63□□□□□ -1.35
LARP4-201ENST00000293618 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
LARP4-201ENST00000293618 WDFY3Q8IZQ1 3526 aa6.56□□□□□ -1.36
LARP4-201ENST00000293618 RELNP78509 3460 aa6.55□□□□□ -1.36
LARP4-201ENST00000293618 SRRM2Q9UQ35 2752 aaKnown RBP6.53□□□□□ -1.36
LARP4-201ENST00000293618 FBN3Q75N90 2809 aa6.53□□□□□ -1.36
LARP4-201ENST00000293618 FBN1P35555 2871 aaKnown RBP6.53□□□□□ -1.36
LARP4-201ENST00000293618 A0A1B0GVY2 172 aa6.48□□□□□ -1.37
LARP4-201ENST00000293618 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
LARP4-201ENST00000293618 MEGF8Q7Z7M0 2845 aa6.45□□□□□ -1.38
LARP4-201ENST00000293618 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
LARP4-201ENST00000293618 CSMD1Q96PZ7 3565 aa6.4□□□□□ -1.39
LARP4-201ENST00000293618 MUC3AQ02505 3323 aa6.39□□□□□ -1.39
LARP4-201ENST00000293618 ZFHX4Q86UP3 3567 aa6.39□□□□□ -1.39
LARP4-201ENST00000293618 KRTAP3-3Q9BYR6 98 aa6.39□□□□□ -1.39
LARP4-201ENST00000293618 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
LARP4-201ENST00000293618 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
LARP4-201ENST00000293618 INE1O15225 51 aa6.35□□□□□ -1.39
LARP4-201ENST00000293618 SMG1Q96Q15 3661 aaKnown RBP6.29□□□□□ -1.4
LARP4-201ENST00000293618 LAMA5O15230 3695 aa6.24□□□□□ -1.41
LARP4-201ENST00000293618 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
LARP4-201ENST00000293618 ASPMQ8IZT6 3477 aa6.21□□□□□ -1.41
LARP4-201ENST00000293618 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
LARP4-201ENST00000293618 DMDP11532 3685 aa6.14□□□□□ -1.43
LARP4-201ENST00000293618 SVEP1Q4LDE5 3571 aa6.12□□□□□ -1.43
LARP4-201ENST00000293618 ANK3Q12955 4377 aaKnown RBP6.07□□□□□ -1.44
LARP4-201ENST00000293618 KRTAP10-4P60372 401 aaPredicted RBP6.05□□□□□ -1.44
LARP4-201ENST00000293618 CUBNO60494 3623 aa6.04□□□□□ -1.44
LARP4-201ENST00000293618 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
LARP4-201ENST00000293618 TRRAPQ9Y4A5 3859 aa5.98□□□□□ -1.45
LARP4-201ENST00000293618 ZFHX3Q15911 3703 aa5.97□□□□□ -1.45
LARP4-201ENST00000293618 NBPF19A0A087WUL8 3843 aa5.92□□□□□ -1.46
LARP4-201ENST00000293618 SPENQ96T58 3664 aaKnown RBP5.88□□□□□ -1.47
LARP4-201ENST00000293618 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
LARP4-201ENST00000293618 CSMD2Q7Z408 3487 aa5.84□□□□□ -1.47
LARP4-201ENST00000293618 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
LARP4-201ENST00000293618 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
LARP4-201ENST00000293618 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
LARP4-201ENST00000293618 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
LARP4-201ENST00000293618 BSNQ9UPA5 3926 aa5.68□□□□□ -1.5
LARP4-201ENST00000293618 VPS13CQ709C8 3753 aa5.62□□□□□ -1.51
LARP4-201ENST00000293618 DNAH11Q96DT5 4516 aa5.61□□□□□ -1.51
LARP4-201ENST00000293618 DNAH10Q8IVF4 4471 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms