RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 WDFY4Q6ZS81 3184 aa4.92□□□□□ -1.62
SMC2-201ENST00000286398 HIVEP1P15822 2718 aa4.92□□□□□ -1.62
SMC2-201ENST00000286398 MYO15AQ9UKN7 3530 aa4.91□□□□□ -1.62
SMC2-201ENST00000286398 TACC2O95359 2948 aa4.89□□□□□ -1.63
SMC2-201ENST00000286398 KALRNO60229 2985 aa4.89□□□□□ -1.63
SMC2-201ENST00000286398 DSPP15924 2871 aaKnown RBP4.88□□□□□ -1.63
SMC2-201ENST00000286398 WDFY3Q8IZQ1 3526 aa4.88□□□□□ -1.63
SMC2-201ENST00000286398 TENM3Q9P273 2699 aa4.88□□□□□ -1.63
SMC2-201ENST00000286398 SPEGQ15772 3267 aa4.86□□□□□ -1.63
SMC2-201ENST00000286398 REV3LO60673 3130 aa4.84□□□□□ -1.64
SMC2-201ENST00000286398 UNC80Q8N2C7 3258 aa4.83□□□□□ -1.64
SMC2-201ENST00000286398 NIPBLQ6KC79 2804 aaeCLIP4.82□□□□□ -1.64
SMC2-201ENST00000286398 CELSR2Q9HCU4 2923 aa4.8□□□□□ -1.64
SMC2-201ENST00000286398 FLNCQ14315 2725 aa4.79□□□□□ -1.64
SMC2-201ENST00000286398 TENM4Q6N022 2769 aa4.79□□□□□ -1.64
SMC2-201ENST00000286398 VPS13AQ96RL7 3174 aa4.78□□□□□ -1.64
SMC2-201ENST00000286398 NBEAQ8NFP9 2946 aa4.77□□□□□ -1.65
SMC2-201ENST00000286398 FRYLO94915 3013 aa4.76□□□□□ -1.65
SMC2-201ENST00000286398 MKI67P46013 3256 aaKnown RBP4.75□□□□□ -1.65
SMC2-201ENST00000286398 COL12A1Q99715 3063 aa4.75□□□□□ -1.65
SMC2-201ENST00000286398 COL6A3P12111 3177 aa4.73□□□□□ -1.65
SMC2-201ENST00000286398 XP32Q5T750 250 aa4.72□□□□□ -1.65
SMC2-201ENST00000286398 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
SMC2-201ENST00000286398 TGP01266 2768 aa4.71□□□□□ -1.65
SMC2-201ENST00000286398 NF1P21359 2839 aa4.71□□□□□ -1.66
SMC2-201ENST00000286398 KRTAP1-4P0C5Y4 121 aa4.7□□□□□ -1.66
SMC2-201ENST00000286398 DCHS2Q6V1P9 2916 aa4.69□□□□□ -1.66
SMC2-201ENST00000286398 TENM1Q9UKZ4 2725 aa4.67□□□□□ -1.66
SMC2-201ENST00000286398 LAMA1P25391 3075 aa4.67□□□□□ -1.66
SMC2-201ENST00000286398 PDZD2O15018 2839 aa4.66□□□□□ -1.66
SMC2-201ENST00000286398 CRYBG3Q68DQ2 2970 aa4.65□□□□□ -1.66
SMC2-201ENST00000286398 SPTBN5Q9NRC6 3674 aaKnown RBP4.65□□□□□ -1.66
SMC2-201ENST00000286398 ATMQ13315 3056 aa4.65□□□□□ -1.66
SMC2-201ENST00000286398 EYSQ5T1H1 3165 aa4.61□□□□□ -1.67
SMC2-201ENST00000286398 BOD1L1Q8NFC6 3051 aa4.61□□□□□ -1.67
SMC2-201ENST00000286398 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
SMC2-201ENST00000286398 ADGRG4Q8IZF6 3080 aa4.61□□□□□ -1.67
SMC2-201ENST00000286398 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
SMC2-201ENST00000286398 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
SMC2-201ENST00000286398 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
SMC2-201ENST00000286398 CELSR3Q9NYQ7 3312 aa4.6□□□□□ -1.67
SMC2-201ENST00000286398 ZZEF1O43149 2961 aa4.59□□□□□ -1.68
SMC2-201ENST00000286398 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
SMC2-201ENST00000286398 HTTP42858 3142 aa4.57□□□□□ -1.68
SMC2-201ENST00000286398 DMDP11532 3685 aa4.57□□□□□ -1.68
SMC2-201ENST00000286398 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
SMC2-201ENST00000286398 ZANQ9Y493 2812 aa4.53□□□□□ -1.68
SMC2-201ENST00000286398 CFAP47Q6ZTR5 3102 aa4.51□□□□□ -1.69
SMC2-201ENST00000286398 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
SMC2-201ENST00000286398 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
SMC2-201ENST00000286398 INE1O15225 51 aa4.48□□□□□ -1.69
SMC2-201ENST00000286398 ASPMQ8IZT6 3477 aa4.47□□□□□ -1.69
SMC2-201ENST00000286398 PKD1L1Q8TDX9 2849 aa4.46□□□□□ -1.69
SMC2-201ENST00000286398 FBN2P35556 2912 aa4.45□□□□□ -1.7
SMC2-201ENST00000286398 DCHS1Q96JQ0 3298 aa4.45□□□□□ -1.7
SMC2-201ENST00000286398 TNRC18O15417 2968 aaPredicted RBP4.44□□□□□ -1.7
SMC2-201ENST00000286398 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
SMC2-201ENST00000286398 ZFHX4Q86UP3 3567 aa4.43□□□□□ -1.7
SMC2-201ENST00000286398 SPENQ96T58 3664 aaKnown RBP4.42□□□□□ -1.7
SMC2-201ENST00000286398 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
SMC2-201ENST00000286398 VWFP04275 2813 aa4.41□□□□□ -1.7
SMC2-201ENST00000286398 CELSR1Q9NYQ6 3014 aa4.4□□□□□ -1.71
SMC2-201ENST00000286398 DMXL1Q9Y485 3027 aa4.39□□□□□ -1.71
SMC2-201ENST00000286398 RELNP78509 3460 aa4.39□□□□□ -1.71
SMC2-201ENST00000286398 KRTAP3-1Q9BYR8 98 aa4.36□□□□□ -1.71
SMC2-201ENST00000286398 LOC400499M0QZD8 3231 aa4.33□□□□□ -1.72
SMC2-201ENST00000286398 CSMD1Q96PZ7 3565 aa4.33□□□□□ -1.72
SMC2-201ENST00000286398 SMG1Q96Q15 3661 aaKnown RBP4.33□□□□□ -1.72
SMC2-201ENST00000286398 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
SMC2-201ENST00000286398 KRTAP21-3Q3LHN1 58 aa4.28□□□□□ -1.72
SMC2-201ENST00000286398 LAMA5O15230 3695 aa4.25□□□□□ -1.73
SMC2-201ENST00000286398 ZFHX3Q15911 3703 aa4.23□□□□□ -1.73
SMC2-201ENST00000286398 HRNRQ86YZ3 2850 aaPredicted RBP4.22□□□□□ -1.73
SMC2-201ENST00000286398 SVEP1Q4LDE5 3571 aa4.22□□□□□ -1.73
SMC2-201ENST00000286398 MXRA5Q9NR99 2828 aa4.22□□□□□ -1.73
SMC2-201ENST00000286398 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
SMC2-201ENST00000286398 MUC3AQ02505 3323 aa4.2□□□□□ -1.74
SMC2-201ENST00000286398 MEGF8Q7Z7M0 2845 aa4.17□□□□□ -1.74
SMC2-201ENST00000286398 FBN3Q75N90 2809 aa4.16□□□□□ -1.74
SMC2-201ENST00000286398 COL7A1Q02388 2944 aa4.14□□□□□ -1.75
SMC2-201ENST00000286398 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
SMC2-201ENST00000286398 CUBNO60494 3623 aa4.1□□□□□ -1.75
SMC2-201ENST00000286398 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
SMC2-201ENST00000286398 FBN1P35555 2871 aaKnown RBP4.05□□□□□ -1.76
SMC2-201ENST00000286398 KRTAP3-3Q9BYR6 98 aa4.04□□□□□ -1.76
SMC2-201ENST00000286398 CSMD2Q7Z408 3487 aa4.02□□□□□ -1.77
SMC2-201ENST00000286398 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
SMC2-201ENST00000286398 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
SMC2-201ENST00000286398 VPS13CQ709C8 3753 aa3.97□□□□□ -1.77
SMC2-201ENST00000286398 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
SMC2-201ENST00000286398 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
SMC2-201ENST00000286398 AKAP9Q99996 3911 aa3.87□□□□□ -1.79
SMC2-201ENST00000286398 BSNQ9UPA5 3926 aa3.85□□□□□ -1.79
SMC2-201ENST00000286398 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
SMC2-201ENST00000286398 OTOGQ6ZRI0 2925 aa3.84□□□□□ -1.8
SMC2-201ENST00000286398 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
SMC2-201ENST00000286398 NBPF19A0A087WUL8 3843 aa3.74□□□□□ -1.81
SMC2-201ENST00000286398 KRTAP10-4P60372 401 aaPredicted RBP3.67□□□□□ -1.82
SMC2-201ENST00000286398 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
SMC2-201ENST00000286398 CSMD3Q7Z407 3707 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms