RNA–Protein interactions for RNA: ENST00000266058.8

SLIT1-201, Transcript of slit guidance ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLIT1, Length 7,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-201ENST00000266058 COL12A1Q99715 3063 aa7.95□□□□□ -1.14
SLIT1-201ENST00000266058 DMXL2Q8TDJ6 3036 aa7.95□□□□□ -1.14
SLIT1-201ENST00000266058 CFAP47Q6ZTR5 3102 aa7.93□□□□□ -1.14
SLIT1-201ENST00000266058 RPS29P62273 56 aaKnown RBP7.9□□□□□ -1.14
SLIT1-201ENST00000266058 KRTAP7-1Q8IUC3 87 aa7.9□□□□□ -1.15
SLIT1-201ENST00000266058 KRTAP13-2Q52LG2 175 aa7.88□□□□□ -1.15
SLIT1-201ENST00000266058 FRYLO94915 3013 aa7.88□□□□□ -1.15
SLIT1-201ENST00000266058 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
SLIT1-201ENST00000266058 TNRC18O15417 2968 aaPredicted RBP7.87□□□□□ -1.15
SLIT1-201ENST00000266058 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
SLIT1-201ENST00000266058 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
SLIT1-201ENST00000266058 CDH23Q9H251 3354 aa7.82□□□□□ -1.16
SLIT1-201ENST00000266058 COL6A3P12111 3177 aa7.8□□□□□ -1.16
SLIT1-201ENST00000266058 ATMQ13315 3056 aa7.8□□□□□ -1.16
SLIT1-201ENST00000266058 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
SLIT1-201ENST00000266058 ITPR1Q14643 2758 aa7.79□□□□□ -1.16
SLIT1-201ENST00000266058 ZZEF1O43149 2961 aa7.79□□□□□ -1.16
SLIT1-201ENST00000266058 LRBAP50851 2863 aa7.79□□□□□ -1.16
SLIT1-201ENST00000266058 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
SLIT1-201ENST00000266058 FLNCQ14315 2725 aa7.75□□□□□ -1.17
SLIT1-201ENST00000266058 TACC2O95359 2948 aa7.75□□□□□ -1.17
SLIT1-201ENST00000266058 SZT2Q5T011 3432 aa7.74□□□□□ -1.17
SLIT1-201ENST00000266058 HIVEP1P15822 2718 aa7.74□□□□□ -1.17
SLIT1-201ENST00000266058 TENM1Q9UKZ4 2725 aa7.74□□□□□ -1.17
SLIT1-201ENST00000266058 BOD1L1Q8NFC6 3051 aa7.68□□□□□ -1.18
SLIT1-201ENST00000266058 USP34Q70CQ2 3546 aa7.68□□□□□ -1.18
SLIT1-201ENST00000266058 NBEAQ8NFP9 2946 aa7.64□□□□□ -1.19
SLIT1-201ENST00000266058 ZFHX4Q86UP3 3567 aa7.6□□□□□ -1.19
SLIT1-201ENST00000266058 ADGRG4Q8IZF6 3080 aa7.58□□□□□ -1.2
SLIT1-201ENST00000266058 TENM3Q9P273 2699 aa7.57□□□□□ -1.2
SLIT1-201ENST00000266058 CELSR2Q9HCU4 2923 aa7.57□□□□□ -1.2
SLIT1-201ENST00000266058 ASPMQ8IZT6 3477 aa7.55□□□□□ -1.2
SLIT1-201ENST00000266058 NF1P21359 2839 aa7.55□□□□□ -1.2
SLIT1-201ENST00000266058 CELSR1Q9NYQ6 3014 aa7.55□□□□□ -1.2
SLIT1-201ENST00000266058 XP32Q5T750 250 aa7.49□□□□□ -1.21
SLIT1-201ENST00000266058 H0YAA0 97 aa7.47□□□□□ -1.21
SLIT1-201ENST00000266058 NBPF19A0A087WUL8 3843 aa7.45□□□□□ -1.22
SLIT1-201ENST00000266058 SPTBN5Q9NRC6 3674 aaKnown RBP7.44□□□□□ -1.22
SLIT1-201ENST00000266058 PDZD2O15018 2839 aa7.43□□□□□ -1.22
SLIT1-201ENST00000266058 TENM4Q6N022 2769 aa7.42□□□□□ -1.22
SLIT1-201ENST00000266058 DCHS2Q6V1P9 2916 aa7.42□□□□□ -1.22
SLIT1-201ENST00000266058 KRTAP1-4P0C5Y4 121 aa7.41□□□□□ -1.22
SLIT1-201ENST00000266058 MYO15AQ9UKN7 3530 aa7.41□□□□□ -1.22
SLIT1-201ENST00000266058 DMXL1Q9Y485 3027 aa7.4□□□□□ -1.22
SLIT1-201ENST00000266058 LOC400499M0QZD8 3231 aa7.39□□□□□ -1.23
SLIT1-201ENST00000266058 NIPBLQ6KC79 2804 aaeCLIP7.38□□□□□ -1.23
SLIT1-201ENST00000266058 EYSQ5T1H1 3165 aa7.36□□□□□ -1.23
SLIT1-201ENST00000266058 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
SLIT1-201ENST00000266058 WDFY3Q8IZQ1 3526 aa7.31□□□□□ -1.24
SLIT1-201ENST00000266058 PKD1L1Q8TDX9 2849 aa7.27□□□□□ -1.25
SLIT1-201ENST00000266058 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
SLIT1-201ENST00000266058 VWFP04275 2813 aa7.26□□□□□ -1.25
SLIT1-201ENST00000266058 ZANQ9Y493 2812 aa7.25□□□□□ -1.25
SLIT1-201ENST00000266058 TGP01266 2768 aa7.24□□□□□ -1.25
SLIT1-201ENST00000266058 KRTAP21-3Q3LHN1 58 aa7.23□□□□□ -1.25
SLIT1-201ENST00000266058 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
SLIT1-201ENST00000266058 DCHS1Q96JQ0 3298 aa7.21□□□□□ -1.26
SLIT1-201ENST00000266058 FBN2P35556 2912 aa7.21□□□□□ -1.26
SLIT1-201ENST00000266058 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
SLIT1-201ENST00000266058 KRTAP13-3Q3SY46 172 aa7.16□□□□□ -1.26
SLIT1-201ENST00000266058 LAMA5O15230 3695 aa7.14□□□□□ -1.27
SLIT1-201ENST00000266058 SRRM2Q9UQ35 2752 aaKnown RBP7.12□□□□□ -1.27
SLIT1-201ENST00000266058 HRNRQ86YZ3 2850 aaPredicted RBP7.08□□□□□ -1.28
SLIT1-201ENST00000266058 TENM2Q9NT68 2774 aa7.06□□□□□ -1.28
SLIT1-201ENST00000266058 RELNP78509 3460 aa7.02□□□□□ -1.29
SLIT1-201ENST00000266058 ZFHX3Q15911 3703 aa7□□□□□ -1.29
SLIT1-201ENST00000266058 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
SLIT1-201ENST00000266058 MEGF8Q7Z7M0 2845 aa6.92□□□□□ -1.3
SLIT1-201ENST00000266058 COL7A1Q02388 2944 aa6.9□□□□□ -1.31
SLIT1-201ENST00000266058 MXRA5Q9NR99 2828 aa6.89□□□□□ -1.31
SLIT1-201ENST00000266058 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
SLIT1-201ENST00000266058 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
SLIT1-201ENST00000266058 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
SLIT1-201ENST00000266058 SMG1Q96Q15 3661 aaKnown RBP6.83□□□□□ -1.32
SLIT1-201ENST00000266058 INE1O15225 51 aa6.73□□□□□ -1.33
SLIT1-201ENST00000266058 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
SLIT1-201ENST00000266058 CUBNO60494 3623 aa6.69□□□□□ -1.34
SLIT1-201ENST00000266058 DMDP11532 3685 aa6.67□□□□□ -1.34
SLIT1-201ENST00000266058 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.35
SLIT1-201ENST00000266058 MUC3AQ02505 3323 aa6.64□□□□□ -1.35
SLIT1-201ENST00000266058 OTOGQ6ZRI0 2925 aa6.63□□□□□ -1.35
SLIT1-201ENST00000266058 FBN1P35555 2871 aaKnown RBP6.54□□□□□ -1.36
SLIT1-201ENST00000266058 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
SLIT1-201ENST00000266058 FBN3Q75N90 2809 aa6.52□□□□□ -1.37
SLIT1-201ENST00000266058 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
SLIT1-201ENST00000266058 CSMD2Q7Z408 3487 aa6.45□□□□□ -1.38
SLIT1-201ENST00000266058 CSMD3Q7Z407 3707 aa6.4□□□□□ -1.38
SLIT1-201ENST00000266058 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.39
SLIT1-201ENST00000266058 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
SLIT1-201ENST00000266058 TRRAPQ9Y4A5 3859 aa6.28□□□□□ -1.4
SLIT1-201ENST00000266058 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
SLIT1-201ENST00000266058 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
SLIT1-201ENST00000266058 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
SLIT1-201ENST00000266058 VPS13CQ709C8 3753 aa6.22□□□□□ -1.41
SLIT1-201ENST00000266058 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
SLIT1-201ENST00000266058 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
SLIT1-201ENST00000266058 ANK3Q12955 4377 aaKnown RBP6.17□□□□□ -1.42
SLIT1-201ENST00000266058 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
SLIT1-201ENST00000266058 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
SLIT1-201ENST00000266058 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms