RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
AFF4-201ENST00000265343 ZZEF1O43149 2961 aa8.47□□□□□ -1.05
AFF4-201ENST00000265343 REV3LO60673 3130 aa8.46□□□□□ -1.05
AFF4-201ENST00000265343 XIRP2A4UGR9 3374 aa8.44□□□□□ -1.06
AFF4-201ENST00000265343 MKI67P46013 3256 aaKnown RBP8.42□□□□□ -1.06
AFF4-201ENST00000265343 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
AFF4-201ENST00000265343 TNRC18O15417 2968 aaPredicted RBP8.39□□□□□ -1.07
AFF4-201ENST00000265343 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
AFF4-201ENST00000265343 DCHS2Q6V1P9 2916 aa8.35□□□□□ -1.07
AFF4-201ENST00000265343 KRTAP10-2P60368 255 aa8.34□□□□□ -1.08
AFF4-201ENST00000265343 CELSR3Q9NYQ7 3312 aa8.32□□□□□ -1.08
AFF4-201ENST00000265343 LAMA1P25391 3075 aa8.32□□□□□ -1.08
AFF4-201ENST00000265343 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
AFF4-201ENST00000265343 UNC80Q8N2C7 3258 aa8.31□□□□□ -1.08
AFF4-201ENST00000265343 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
AFF4-201ENST00000265343 SRRM2Q9UQ35 2752 aaKnown RBP8.3□□□□□ -1.08
AFF4-201ENST00000265343 P0C880 135 aa8.3□□□□□ -1.08
AFF4-201ENST00000265343 DMXL1Q9Y485 3027 aa8.25□□□□□ -1.09
AFF4-201ENST00000265343 BOD1L1Q8NFC6 3051 aa8.24□□□□□ -1.09
AFF4-201ENST00000265343 HTTP42858 3142 aa8.23□□□□□ -1.09
AFF4-201ENST00000265343 FBN2P35556 2912 aa8.23□□□□□ -1.09
AFF4-201ENST00000265343 USP34Q70CQ2 3546 aa8.21□□□□□ -1.09
AFF4-201ENST00000265343 H0YAA0 97 aa8.21□□□□□ -1.1
AFF4-201ENST00000265343 COL6A3P12111 3177 aa8.17□□□□□ -1.1
AFF4-201ENST00000265343 ADGRG4Q8IZF6 3080 aa8.16□□□□□ -1.1
AFF4-201ENST00000265343 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
AFF4-201ENST00000265343 LAMA3Q16787 3333 aa8.14□□□□□ -1.11
AFF4-201ENST00000265343 KRTAP7-1Q8IUC3 87 aa8.13□□□□□ -1.11
AFF4-201ENST00000265343 ATMQ13315 3056 aa8.13□□□□□ -1.11
AFF4-201ENST00000265343 DNAH14Q0VDD8 3507 aa8.13□□□□□ -1.11
AFF4-201ENST00000265343 HRNRQ86YZ3 2850 aaPredicted RBP8.11□□□□□ -1.11
AFF4-201ENST00000265343 MXRA5Q9NR99 2828 aa8.1□□□□□ -1.11
AFF4-201ENST00000265343 CELSR1Q9NYQ6 3014 aa8.07□□□□□ -1.12
AFF4-201ENST00000265343 TENM4Q6N022 2769 aa8.02□□□□□ -1.13
AFF4-201ENST00000265343 BRCA2P51587 3418 aa8.01□□□□□ -1.13
AFF4-201ENST00000265343 VWFP04275 2813 aa8□□□□□ -1.13
AFF4-201ENST00000265343 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
AFF4-201ENST00000265343 PKD1L1Q8TDX9 2849 aa7.91□□□□□ -1.14
AFF4-201ENST00000265343 VCANP13611 3396 aa7.9□□□□□ -1.15
AFF4-201ENST00000265343 KRTAP10-8P60410 259 aa7.9□□□□□ -1.15
AFF4-201ENST00000265343 CFAP47Q6ZTR5 3102 aa7.87□□□□□ -1.15
AFF4-201ENST00000265343 CDH23Q9H251 3354 aa7.85□□□□□ -1.15
AFF4-201ENST00000265343 XP32Q5T750 250 aa7.8□□□□□ -1.16
AFF4-201ENST00000265343 COL7A1Q02388 2944 aa7.77□□□□□ -1.17
AFF4-201ENST00000265343 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
AFF4-201ENST00000265343 TENM2Q9NT68 2774 aa7.74□□□□□ -1.17
AFF4-201ENST00000265343 SPEGQ15772 3267 aa7.69□□□□□ -1.18
AFF4-201ENST00000265343 ZFHX3Q15911 3703 aa7.69□□□□□ -1.18
AFF4-201ENST00000265343 KRTAP1-4P0C5Y4 121 aa7.68□□□□□ -1.18
AFF4-201ENST00000265343 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
AFF4-201ENST00000265343 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
AFF4-201ENST00000265343 INE1O15225 51 aa7.61□□□□□ -1.19
AFF4-201ENST00000265343 MEGF8Q7Z7M0 2845 aa7.61□□□□□ -1.19
AFF4-201ENST00000265343 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
AFF4-201ENST00000265343 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
AFF4-201ENST00000265343 MYO15AQ9UKN7 3530 aa7.54□□□□□ -1.2
AFF4-201ENST00000265343 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
AFF4-201ENST00000265343 WDFY3Q8IZQ1 3526 aa7.52□□□□□ -1.21
AFF4-201ENST00000265343 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
AFF4-201ENST00000265343 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
AFF4-201ENST00000265343 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
AFF4-201ENST00000265343 SZT2Q5T011 3432 aa7.42□□□□□ -1.22
AFF4-201ENST00000265343 ZFHX4Q86UP3 3567 aa7.4□□□□□ -1.23
AFF4-201ENST00000265343 A0A1B0GVY2 172 aa7.38□□□□□ -1.23
AFF4-201ENST00000265343 KRTAP21-3Q3LHN1 58 aa7.38□□□□□ -1.23
AFF4-201ENST00000265343 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
AFF4-201ENST00000265343 NBPF19A0A087WUL8 3843 aa7.35□□□□□ -1.23
AFF4-201ENST00000265343 LOC400499M0QZD8 3231 aa7.34□□□□□ -1.23
AFF4-201ENST00000265343 LAMA5O15230 3695 aa7.28□□□□□ -1.24
AFF4-201ENST00000265343 ASPMQ8IZT6 3477 aa7.28□□□□□ -1.24
AFF4-201ENST00000265343 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
AFF4-201ENST00000265343 SMG1Q96Q15 3661 aaKnown RBP7.26□□□□□ -1.25
AFF4-201ENST00000265343 SPENQ96T58 3664 aaKnown RBP7.22□□□□□ -1.25
AFF4-201ENST00000265343 OTOGQ6ZRI0 2925 aa7.19□□□□□ -1.26
AFF4-201ENST00000265343 RELNP78509 3460 aa7.18□□□□□ -1.26
AFF4-201ENST00000265343 DMDP11532 3685 aa7.16□□□□□ -1.26
AFF4-201ENST00000265343 CSMD1Q96PZ7 3565 aa7.08□□□□□ -1.28
AFF4-201ENST00000265343 DCHS1Q96JQ0 3298 aa7.06□□□□□ -1.28
AFF4-201ENST00000265343 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
AFF4-201ENST00000265343 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
AFF4-201ENST00000265343 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
AFF4-201ENST00000265343 VPS13CQ709C8 3753 aa6.99□□□□□ -1.29
AFF4-201ENST00000265343 TRRAPQ9Y4A5 3859 aa6.95□□□□□ -1.3
AFF4-201ENST00000265343 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
AFF4-201ENST00000265343 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
AFF4-201ENST00000265343 SVEP1Q4LDE5 3571 aa6.72□□□□□ -1.33
AFF4-201ENST00000265343 ALMS1Q8TCU4 4167 aa6.71□□□□□ -1.34
AFF4-201ENST00000265343 CUBNO60494 3623 aa6.71□□□□□ -1.34
AFF4-201ENST00000265343 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
AFF4-201ENST00000265343 MUC3AQ02505 3323 aa6.66□□□□□ -1.34
AFF4-201ENST00000265343 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
AFF4-201ENST00000265343 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
AFF4-201ENST00000265343 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
AFF4-201ENST00000265343 BSNQ9UPA5 3926 aa6.41□□□□□ -1.38
AFF4-201ENST00000265343 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
AFF4-201ENST00000265343 CSMD2Q7Z408 3487 aa6.34□□□□□ -1.39
AFF4-201ENST00000265343 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
AFF4-201ENST00000265343 LYSTQ99698 3801 aa6.28□□□□□ -1.4
AFF4-201ENST00000265343 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
AFF4-201ENST00000265343 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms