RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 A0A087X002 238 aa6□□□□□ -1.45
PHF3-201ENST00000262043 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
PHF3-201ENST00000262043 DMXL1Q9Y485 3027 aa5.99□□□□□ -1.45
PHF3-201ENST00000262043 TNRC18O15417 2968 aaPredicted RBP5.99□□□□□ -1.45
PHF3-201ENST00000262043 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
PHF3-201ENST00000262043 H3BS24 57 aa5.97□□□□□ -1.45
PHF3-201ENST00000262043 DCHS1Q96JQ0 3298 aa5.96□□□□□ -1.45
PHF3-201ENST00000262043 LAMA5O15230 3695 aa5.95□□□□□ -1.46
PHF3-201ENST00000262043 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
PHF3-201ENST00000262043 HIVEP1P15822 2718 aa5.94□□□□□ -1.46
PHF3-201ENST00000262043 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
PHF3-201ENST00000262043 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
PHF3-201ENST00000262043 CELSR2Q9HCU4 2923 aa5.92□□□□□ -1.46
PHF3-201ENST00000262043 KRTAP11-1Q8IUC1 163 aa5.91□□□□□ -1.46
PHF3-201ENST00000262043 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
PHF3-201ENST00000262043 FLNCQ14315 2725 aa5.9□□□□□ -1.46
PHF3-201ENST00000262043 NBPF19A0A087WUL8 3843 aa5.88□□□□□ -1.47
PHF3-201ENST00000262043 CSMD1Q96PZ7 3565 aa5.84□□□□□ -1.47
PHF3-201ENST00000262043 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
PHF3-201ENST00000262043 ZFHX4Q86UP3 3567 aa5.84□□□□□ -1.47
PHF3-201ENST00000262043 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
PHF3-201ENST00000262043 KRTAP7-1Q8IUC3 87 aa5.81□□□□□ -1.48
PHF3-201ENST00000262043 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
PHF3-201ENST00000262043 A8MUU9 505 aa5.79□□□□□ -1.48
PHF3-201ENST00000262043 A8MU10 97 aa5.79□□□□□ -1.48
PHF3-201ENST00000262043 DCHS2Q6V1P9 2916 aa5.78□□□□□ -1.48
PHF3-201ENST00000262043 FBN2P35556 2912 aa5.78□□□□□ -1.48
PHF3-201ENST00000262043 HRNRQ86YZ3 2850 aaPredicted RBP5.77□□□□□ -1.49
PHF3-201ENST00000262043 RELNP78509 3460 aa5.77□□□□□ -1.49
PHF3-201ENST00000262043 DMDP11532 3685 aa5.77□□□□□ -1.49
PHF3-201ENST00000262043 ZANQ9Y493 2812 aa5.77□□□□□ -1.49
PHF3-201ENST00000262043 CELSR1Q9NYQ6 3014 aa5.76□□□□□ -1.49
PHF3-201ENST00000262043 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
PHF3-201ENST00000262043 KRTAP13-1Q8IUC0 172 aa5.73□□□□□ -1.49
PHF3-201ENST00000262043 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
PHF3-201ENST00000262043 SPENQ96T58 3664 aaKnown RBP5.71□□□□□ -1.5
PHF3-201ENST00000262043 A6NN06 94 aa5.71□□□□□ -1.5
PHF3-201ENST00000262043 SMG1Q96Q15 3661 aaKnown RBP5.69□□□□□ -1.5
PHF3-201ENST00000262043 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
PHF3-201ENST00000262043 NF1P21359 2839 aa5.67□□□□□ -1.5
PHF3-201ENST00000262043 TENM1Q9UKZ4 2725 aa5.65□□□□□ -1.5
PHF3-201ENST00000262043 NIPBLQ6KC79 2804 aaeCLIP5.63□□□□□ -1.515e-6■■□□□ 12.2
PHF3-201ENST00000262043 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
PHF3-201ENST00000262043 SVEP1Q4LDE5 3571 aa5.58□□□□□ -1.52
PHF3-201ENST00000262043 TNP1P09430 55 aa5.57□□□□□ -1.52
PHF3-201ENST00000262043 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
PHF3-201ENST00000262043 MXRA5Q9NR99 2828 aa5.55□□□□□ -1.52
PHF3-201ENST00000262043 TENM4Q6N022 2769 aa5.54□□□□□ -1.52
PHF3-201ENST00000262043 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
PHF3-201ENST00000262043 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
PHF3-201ENST00000262043 CUBNO60494 3623 aa5.5□□□□□ -1.53
PHF3-201ENST00000262043 TGP01266 2768 aa5.47□□□□□ -1.53
PHF3-201ENST00000262043 XP32Q5T750 250 aa5.46□□□□□ -1.53
PHF3-201ENST00000262043 A0A1B0GVY2 172 aa5.45□□□□□ -1.54
PHF3-201ENST00000262043 KRTAP21-3Q3LHN1 58 aa5.45□□□□□ -1.54
PHF3-201ENST00000262043 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
PHF3-201ENST00000262043 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
PHF3-201ENST00000262043 MUC3AQ02505 3323 aa5.43□□□□□ -1.54
PHF3-201ENST00000262043 BSNQ9UPA5 3926 aa5.42□□□□□ -1.54
PHF3-201ENST00000262043 PDZD2O15018 2839 aa5.41□□□□□ -1.54
PHF3-201ENST00000262043 H0YAA0 97 aa5.41□□□□□ -1.54
PHF3-201ENST00000262043 PKD1L1Q8TDX9 2849 aa5.4□□□□□ -1.54
PHF3-201ENST00000262043 VWFP04275 2813 aa5.39□□□□□ -1.55
PHF3-201ENST00000262043 TENM3Q9P273 2699 aa5.39□□□□□ -1.55
PHF3-201ENST00000262043 VPS13CQ709C8 3753 aa5.38□□□□□ -1.55
PHF3-201ENST00000262043 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
PHF3-201ENST00000262043 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
PHF3-201ENST00000262043 TENM2Q9NT68 2774 aa5.31□□□□□ -1.56
PHF3-201ENST00000262043 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
PHF3-201ENST00000262043 TRRAPQ9Y4A5 3859 aa5.29□□□□□ -1.56
PHF3-201ENST00000262043 CSMD2Q7Z408 3487 aa5.27□□□□□ -1.57
PHF3-201ENST00000262043 P0C880 135 aa5.26□□□□□ -1.57
PHF3-201ENST00000262043 KRTAP13-3Q3SY46 172 aa5.25□□□□□ -1.57
PHF3-201ENST00000262043 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
PHF3-201ENST00000262043 FBN1P35555 2871 aaKnown RBP5.19□□□□□ -1.58
PHF3-201ENST00000262043 AKAP9Q99996 3911 aa5.13□□□□□ -1.59
PHF3-201ENST00000262043 COL7A1Q02388 2944 aa5.12□□□□□ -1.59
PHF3-201ENST00000262043 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
PHF3-201ENST00000262043 CSMD3Q7Z407 3707 aa5.1□□□□□ -1.59
PHF3-201ENST00000262043 MEGF8Q7Z7M0 2845 aa5.08□□□□□ -1.6
PHF3-201ENST00000262043 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
PHF3-201ENST00000262043 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
PHF3-201ENST00000262043 ZNF469Q96JG9 3925 aaPredicted RBP5.01□□□□□ -1.61
PHF3-201ENST00000262043 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
PHF3-201ENST00000262043 OTOGQ6ZRI0 2925 aa5□□□□□ -1.61
PHF3-201ENST00000262043 KRTAP13-4Q3LI77 160 aa4.97□□□□□ -1.61
PHF3-201ENST00000262043 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
PHF3-201ENST00000262043 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
PHF3-201ENST00000262043 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
PHF3-201ENST00000262043 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
PHF3-201ENST00000262043 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
PHF3-201ENST00000262043 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
PHF3-201ENST00000262043 MT1HL1P0DM35 61 aa4.62□□□□□ -1.67
PHF3-201ENST00000262043 KRTAP3-3Q9BYR6 98 aa4.61□□□□□ -1.67
PHF3-201ENST00000262043 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
PHF3-201ENST00000262043 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
PHF3-201ENST00000262043 KRTAP10-12P60413 245 aa4.59□□□□□ -1.67
PHF3-201ENST00000262043 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
PHF3-201ENST00000262043 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
PHF3-201ENST00000262043 KMT2AQ03164 3969 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 607.4 ms