RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 UTP20O75691 2785 aaKnown RBP5.75□□□□□ -1.49
CTDSPL2-201ENST00000260327 DCHS1Q96JQ0 3298 aa5.74□□□□□ -1.49
CTDSPL2-201ENST00000260327 LCE6AA0A183 80 aa5.73□□□□□ -1.49
CTDSPL2-201ENST00000260327 HIVEP1P15822 2718 aa5.72□□□□□ -1.49
CTDSPL2-201ENST00000260327 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
CTDSPL2-201ENST00000260327 CELSR2Q9HCU4 2923 aa5.71□□□□□ -1.5
CTDSPL2-201ENST00000260327 KRTAP11-1Q8IUC1 163 aa5.71□□□□□ -1.5
CTDSPL2-201ENST00000260327 TNRC18O15417 2968 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-201ENST00000260327 STAB2Q8WWQ8 2551 aa5.71□□□□□ -1.5
CTDSPL2-201ENST00000260327 NSD1Q96L73 2696 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-201ENST00000260327 R4GN34 69 aa5.7□□□□□ -1.5
CTDSPL2-201ENST00000260327 FLG2Q5D862 2391 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-201ENST00000260327 ITPR2Q14571 2701 aa5.69□□□□□ -1.5
CTDSPL2-201ENST00000260327 KRTAP7-1Q8IUC3 87 aa5.69□□□□□ -1.5
CTDSPL2-201ENST00000260327 ZANQ9Y493 2812 aa5.69□□□□□ -1.5
CTDSPL2-201ENST00000260327 ZFHX4Q86UP3 3567 aa5.69□□□□□ -1.5
CTDSPL2-201ENST00000260327 DMBT1Q9UGM3 2413 aaPredicted RBP5.68□□□□□ -1.5
CTDSPL2-201ENST00000260327 ASPMQ8IZT6 3477 aa5.67□□□□□ -1.5
CTDSPL2-201ENST00000260327 KRTAP10-2P60368 255 aa5.65□□□□□ -1.51
CTDSPL2-201ENST00000260327 M0QZ58 72 aa5.64□□□□□ -1.51
CTDSPL2-201ENST00000260327 HRNRQ86YZ3 2850 aaPredicted RBP5.64□□□□□ -1.51
CTDSPL2-201ENST00000260327 FBN2P35556 2912 aa5.63□□□□□ -1.51
CTDSPL2-201ENST00000260327 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
CTDSPL2-201ENST00000260327 RELNP78509 3460 aa5.61□□□□□ -1.51
CTDSPL2-201ENST00000260327 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
CTDSPL2-201ENST00000260327 DCHS2Q6V1P9 2916 aa5.6□□□□□ -1.51
CTDSPL2-201ENST00000260327 CRYBG3Q68DQ2 2970 aa5.6□□□□□ -1.51
CTDSPL2-201ENST00000260327 A8MUU9 505 aa5.57□□□□□ -1.52
CTDSPL2-201ENST00000260327 LAMA5O15230 3695 aa5.57□□□□□ -1.52
CTDSPL2-201ENST00000260327 NF1P21359 2839 aa5.56□□□□□ -1.52
CTDSPL2-201ENST00000260327 P0C880 135 aa5.56□□□□□ -1.52
CTDSPL2-201ENST00000260327 NIPBLQ6KC79 2804 aaeCLIP5.51□□□□□ -1.53
CTDSPL2-201ENST00000260327 SMG1Q96Q15 3661 aaKnown RBP5.51□□□□□ -1.53
CTDSPL2-201ENST00000260327 DMDP11532 3685 aa5.5□□□□□ -1.53
CTDSPL2-201ENST00000260327 Q6ZRN7 208 aaPredicted RBP5.5□□□□□ -1.53
CTDSPL2-201ENST00000260327 KRTAP13-1Q8IUC0 172 aa5.49□□□□□ -1.53
CTDSPL2-201ENST00000260327 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-201ENST00000260327 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
CTDSPL2-201ENST00000260327 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
CTDSPL2-201ENST00000260327 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
CTDSPL2-201ENST00000260327 KMT2BQ9UMN6 2715 aaPredicted RBP5.45□□□□□ -1.54
CTDSPL2-201ENST00000260327 SVEP1Q4LDE5 3571 aa5.42□□□□□ -1.54
CTDSPL2-201ENST00000260327 MXRA5Q9NR99 2828 aa5.41□□□□□ -1.54
CTDSPL2-201ENST00000260327 CELSR1Q9NYQ6 3014 aa5.39□□□□□ -1.55
CTDSPL2-201ENST00000260327 CUBNO60494 3623 aa5.37□□□□□ -1.55
CTDSPL2-201ENST00000260327 MUC3AQ02505 3323 aa5.37□□□□□ -1.55
CTDSPL2-201ENST00000260327 H0YAA0 97 aa5.35□□□□□ -1.55
CTDSPL2-201ENST00000260327 TENM4Q6N022 2769 aa5.3□□□□□ -1.56
CTDSPL2-201ENST00000260327 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
CTDSPL2-201ENST00000260327 SPENQ96T58 3664 aaKnown RBP5.26□□□□□ -1.57
CTDSPL2-201ENST00000260327 TENM3Q9P273 2699 aa5.24□□□□□ -1.57
CTDSPL2-201ENST00000260327 TGP01266 2768 aa5.21□□□□□ -1.58
CTDSPL2-201ENST00000260327 NBPF19A0A087WUL8 3843 aa5.21□□□□□ -1.58
CTDSPL2-201ENST00000260327 TNP1P09430 55 aa5.21□□□□□ -1.58
CTDSPL2-201ENST00000260327 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
CTDSPL2-201ENST00000260327 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
CTDSPL2-201ENST00000260327 KRTAP1-4P0C5Y4 121 aa5.18□□□□□ -1.58
CTDSPL2-201ENST00000260327 PDZD2O15018 2839 aa5.18□□□□□ -1.58
CTDSPL2-201ENST00000260327 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
CTDSPL2-201ENST00000260327 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
CTDSPL2-201ENST00000260327 CSMD2Q7Z408 3487 aa5.09□□□□□ -1.59
CTDSPL2-201ENST00000260327 FBN1P35555 2871 aaKnown RBP5.09□□□□□ -1.6
CTDSPL2-201ENST00000260327 VWFP04275 2813 aa5.07□□□□□ -1.6
CTDSPL2-201ENST00000260327 KRTAP13-3Q3SY46 172 aa5.06□□□□□ -1.6
CTDSPL2-201ENST00000260327 TENM2Q9NT68 2774 aa5.05□□□□□ -1.6
CTDSPL2-201ENST00000260327 XP32Q5T750 250 aa5.05□□□□□ -1.6
CTDSPL2-201ENST00000260327 ZFHX3Q15911 3703 aa5.03□□□□□ -1.6
CTDSPL2-201ENST00000260327 BSNQ9UPA5 3926 aa5.02□□□□□ -1.61
CTDSPL2-201ENST00000260327 TPRXLQ17RH7 258 aa5□□□□□ -1.61
CTDSPL2-201ENST00000260327 A0A1B0GVY2 172 aa4.99□□□□□ -1.61
CTDSPL2-201ENST00000260327 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
CTDSPL2-201ENST00000260327 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
CTDSPL2-201ENST00000260327 VPS13CQ709C8 3753 aa4.94□□□□□ -1.62
CTDSPL2-201ENST00000260327 OTOGQ6ZRI0 2925 aa4.91□□□□□ -1.62
CTDSPL2-201ENST00000260327 FBN3Q75N90 2809 aa4.9□□□□□ -1.63
CTDSPL2-201ENST00000260327 SRRM2Q9UQ35 2752 aaKnown RBP4.89□□□□□ -1.63
CTDSPL2-201ENST00000260327 ANK3Q12955 4377 aaKnown RBP4.87□□□□□ -1.63
CTDSPL2-201ENST00000260327 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
CTDSPL2-201ENST00000260327 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
CTDSPL2-201ENST00000260327 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
CTDSPL2-201ENST00000260327 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
CTDSPL2-201ENST00000260327 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
CTDSPL2-201ENST00000260327 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
CTDSPL2-201ENST00000260327 CSMD3Q7Z407 3707 aa4.77□□□□□ -1.65
CTDSPL2-201ENST00000260327 COL7A1Q02388 2944 aa4.76□□□□□ -1.65
CTDSPL2-201ENST00000260327 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
CTDSPL2-201ENST00000260327 KRTAP21-3Q3LHN1 58 aa4.73□□□□□ -1.65
CTDSPL2-201ENST00000260327 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL2-201ENST00000260327 ZNF469Q96JG9 3925 aaPredicted RBP4.65□□□□□ -1.66
CTDSPL2-201ENST00000260327 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.67
CTDSPL2-201ENST00000260327 AKAP9Q99996 3911 aa4.62□□□□□ -1.67
CTDSPL2-201ENST00000260327 HUWE1Q7Z6Z7 4374 aaKnown RBP4.61□□□□□ -1.67
CTDSPL2-201ENST00000260327 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
CTDSPL2-201ENST00000260327 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
CTDSPL2-201ENST00000260327 INE1O15225 51 aa4.48□□□□□ -1.69
CTDSPL2-201ENST00000260327 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
CTDSPL2-201ENST00000260327 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
CTDSPL2-201ENST00000260327 KRTAP10-4P60372 401 aaPredicted RBP4.35□□□□□ -1.71
CTDSPL2-201ENST00000260327 DNAH9Q9NYC9 4486 aa4.33□□□□□ -1.72
CTDSPL2-201ENST00000260327 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms