RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 CDIP1Q9H305 208 aa8.71□□□□□ -1.02
GYPC-201ENST00000259254 IGHV6-1A0A0B4J1U7 121 aa8.7□□□□□ -1.02
GYPC-201ENST00000259254 DSCR10P59022 87 aa8.7□□□□□ -1.02
GYPC-201ENST00000259254 ATP5EP2Q5VTU8 51 aa8.7□□□□□ -1.02
GYPC-201ENST00000259254 CXCL6P80162 114 aa8.69□□□□□ -1.02
GYPC-201ENST00000259254 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
GYPC-201ENST00000259254 Q8N9L7 120 aa8.68□□□□□ -1.02
GYPC-201ENST00000259254 K7EQZ3 153 aa8.67□□□□□ -1.02
GYPC-201ENST00000259254 C9orf92A6NGG3 77 aa8.65□□□□□ -1.02
GYPC-201ENST00000259254 PRR15Q8IV56 129 aa8.65□□□□□ -1.02
GYPC-201ENST00000259254 LPAP08519 4548 aa8.63□□□□□ -1.03
GYPC-201ENST00000259254 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
GYPC-201ENST00000259254 C8orf87E5RJ46 101 aa8.62□□□□□ -1.03
GYPC-201ENST00000259254 LINC00313P59037 77 aa8.62□□□□□ -1.03
GYPC-201ENST00000259254 KRTAP13-3Q3SY46 172 aa8.6□□□□□ -1.03
GYPC-201ENST00000259254 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
GYPC-201ENST00000259254 MT-ATP8P03928 68 aa8.58□□□□□ -1.04
GYPC-201ENST00000259254 TPRXLQ17RH7 258 aa8.58□□□□□ -1.04
GYPC-201ENST00000259254 NOTCH2NLQ7Z3S9 236 aa8.58□□□□□ -1.04
GYPC-201ENST00000259254 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
GYPC-201ENST00000259254 WFDC13Q8IUB5 93 aa8.56□□□□□ -1.04
GYPC-201ENST00000259254 RNF213Q63HN8 5207 aa8.55□□□□□ -1.04
GYPC-201ENST00000259254 HCG22E2RYF7 251 aa8.54□□□□□ -1.04
GYPC-201ENST00000259254 CASC2Q6XLA1 102 aa8.54□□□□□ -1.04
GYPC-201ENST00000259254 A0A087WVE0 104 aa8.53□□□□□ -1.04
GYPC-201ENST00000259254 hDV103S1A0JD37 113 aa8.53□□□□□ -1.04
GYPC-201ENST00000259254 XP32Q5T750 250 aa8.5□□□□□ -1.05
GYPC-201ENST00000259254 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
GYPC-201ENST00000259254 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
GYPC-201ENST00000259254 MRPL34Q9BQ48 92 aaKnown RBP8.49□□□□□ -1.05
GYPC-201ENST00000259254 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
GYPC-201ENST00000259254 NDUFS5O43920 106 aa8.46□□□□□ -1.06
GYPC-201ENST00000259254 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
GYPC-201ENST00000259254 A8MUU9 505 aa8.42□□□□□ -1.06
GYPC-201ENST00000259254 RPL37P61927 97 aaKnown RBP8.42□□□□□ -1.06
GYPC-201ENST00000259254 Q75L30 129 aa8.42□□□□□ -1.06
GYPC-201ENST00000259254 Q8N9P0 234 aaPredicted RBP8.41□□□□□ -1.06
GYPC-201ENST00000259254 SCGB1A1P11684 91 aa8.39□□□□□ -1.07
GYPC-201ENST00000259254 FAM236AA0A1B0GUQ0 79 aa8.38□□□□□ -1.07
GYPC-201ENST00000259254 FAM236BA0A1B0GV22 79 aa8.38□□□□□ -1.07
GYPC-201ENST00000259254 ATP11AUNQ6ZP68 121 aa8.37□□□□□ -1.07
GYPC-201ENST00000259254 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
GYPC-201ENST00000259254 TP53AIP1Q9HCN2 124 aa8.33□□□□□ -1.08
GYPC-201ENST00000259254 PCOTHQ58A44 107 aa8.32□□□□□ -1.08
GYPC-201ENST00000259254 ZCCHC13Q8WW36 166 aaKnown RBP8.32□□□□□ -1.08
GYPC-201ENST00000259254 MUC17Q685J3 4493 aa8.29□□□□□ -1.08
GYPC-201ENST00000259254 MUC2Q02817 5179 aa8.28□□□□□ -1.08
GYPC-201ENST00000259254 ATOX1O00244 68 aa8.27□□□□□ -1.09
GYPC-201ENST00000259254 UQCRQO14949 82 aa8.27□□□□□ -1.09
GYPC-201ENST00000259254 A0A0U1RQV1 116 aa8.26□□□□□ -1.09
GYPC-201ENST00000259254 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
GYPC-201ENST00000259254 Q5W150 140 aa8.25□□□□□ -1.09
GYPC-201ENST00000259254 SMIM20Q8N5G0 67 aa8.25□□□□□ -1.09
GYPC-201ENST00000259254 TRAV22A0A0B4J277 110 aa8.22□□□□□ -1.09
GYPC-201ENST00000259254 H0Y9P7 68 aa8.21□□□□□ -1.1
GYPC-201ENST00000259254 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
GYPC-201ENST00000259254 MP68P56378 58 aa8.18□□□□□ -1.1
GYPC-201ENST00000259254 IGKV2D-30A0A075B6S6 120 aa8.17□□□□□ -1.1
GYPC-201ENST00000259254 IGKV2-30P06310 120 aa8.17□□□□□ -1.1
GYPC-201ENST00000259254 C5orf47Q569G3 176 aa8.17□□□□□ -1.1
GYPC-201ENST00000259254 SPINK7P58062 85 aa8.14□□□□□ -1.11
GYPC-201ENST00000259254 SERP2Q8N6R1 65 aa8.14□□□□□ -1.11
GYPC-201ENST00000259254 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
GYPC-201ENST00000259254 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
GYPC-201ENST00000259254 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
GYPC-201ENST00000259254 LINC00208Q96KT6 92 aa8.12□□□□□ -1.11
GYPC-201ENST00000259254 ANAPC13Q9BS18 74 aa8.12□□□□□ -1.11
GYPC-201ENST00000259254 LCE2AQ5TA79 106 aaPredicted RBP8.11□□□□□ -1.11
GYPC-201ENST00000259254 C1orf64Q8NEQ6 169 aa8.11□□□□□ -1.11
GYPC-201ENST00000259254 KRTAP4-1Q9BYQ7 146 aa8.11□□□□□ -1.11
GYPC-201ENST00000259254 H3BPC8 53 aa8.08□□□□□ -1.12
GYPC-201ENST00000259254 COX7CP15954 63 aa8.06□□□□□ -1.12
GYPC-201ENST00000259254 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
GYPC-201ENST00000259254 CYP4F30PQ9H0H9 118 aa8.05□□□□□ -1.12
GYPC-201ENST00000259254 C20orf197Q8N268 126 aa8.04□□□□□ -1.12
GYPC-201ENST00000259254 SNURFQ9Y675 71 aa8.02□□□□□ -1.13
GYPC-201ENST00000259254 HRES1P13985 223 aa8□□□□□ -1.13
GYPC-201ENST00000259254 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
GYPC-201ENST00000259254 KLKP1Q107X0 134 aa7.96□□□□□ -1.14
GYPC-201ENST00000259254 FAM236DA0A1B0GTK5 79 aa7.95□□□□□ -1.14
GYPC-201ENST00000259254 FAM236CP0DP71 79 aa7.95□□□□□ -1.14
GYPC-201ENST00000259254 C4orf26Q17RF5 130 aa7.95□□□□□ -1.14
GYPC-201ENST00000259254 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
GYPC-201ENST00000259254 KRTAP9-2Q9BYQ4 174 aa7.93□□□□□ -1.14
GYPC-201ENST00000259254 CCDC179H3BU77 68 aa7.92□□□□□ -1.14
GYPC-201ENST00000259254 MPLKIPQ8TAP9 179 aa7.91□□□□□ -1.14
GYPC-201ENST00000259254 NDUFC1O43677 76 aa7.84□□□□□ -1.15
GYPC-201ENST00000259254 LCE2CQ5TA81 110 aa7.83□□□□□ -1.16
GYPC-201ENST00000259254 CYSTM1Q9H1C7 97 aa7.83□□□□□ -1.16
GYPC-201ENST00000259254 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
GYPC-201ENST00000259254 PCP4P48539 62 aa7.8□□□□□ -1.16
GYPC-201ENST00000259254 H7BZZ5 65 aa7.78□□□□□ -1.16
GYPC-201ENST00000259254 H1FX-AS1Q4G0G2 97 aa7.78□□□□□ -1.16
GYPC-201ENST00000259254 KRTAP3-1Q9BYR8 98 aa7.78□□□□□ -1.16
GYPC-201ENST00000259254 A8MUN3 132 aa7.76□□□□□ -1.17
GYPC-201ENST00000259254 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
GYPC-201ENST00000259254 MT1HP80294 61 aa7.74□□□□□ -1.17
GYPC-201ENST00000259254 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
GYPC-201ENST00000259254 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
GYPC-201ENST00000259254 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms