RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SNURFQ9Y675 71 aa16.01■□□□□ 0.15
CCM2-201ENST00000258781 TMEM258P61165 79 aa16.01■□□□□ 0.15
CCM2-201ENST00000258781 TYMSOSQ8TAI1 123 aa16.01■□□□□ 0.15
CCM2-201ENST00000258781 C8orf17Q9NRJ1 99 aa16.01■□□□□ 0.15
CCM2-201ENST00000258781 hDV103S1A0JD37 113 aa15.99■□□□□ 0.15
CCM2-201ENST00000258781 IGHV6-1A0A0B4J1U7 121 aa15.98■□□□□ 0.15
CCM2-201ENST00000258781 A0A0U1RQV1 116 aa15.98■□□□□ 0.15
CCM2-201ENST00000258781 LIMD2Q9BT23 127 aa15.97■□□□□ 0.15
CCM2-201ENST00000258781 C5orf47Q569G3 176 aa15.95■□□□□ 0.14
CCM2-201ENST00000258781 BIRC6Q9NR09 4857 aa15.95■□□□□ 0.14
CCM2-201ENST00000258781 NDUFC1O43677 76 aa15.95■□□□□ 0.14
CCM2-201ENST00000258781 H7BZZ5 65 aa15.93■□□□□ 0.14
CCM2-201ENST00000258781 Q8N1X5 172 aa15.93■□□□□ 0.14
CCM2-201ENST00000258781 C4orf48Q5BLP8 95 aa15.93■□□□□ 0.14
CCM2-201ENST00000258781 PRR26Q8N8Z3 221 aa15.9■□□□□ 0.14
CCM2-201ENST00000258781 SPINK1P00995 79 aa15.89■□□□□ 0.13
CCM2-201ENST00000258781 C1orf195Q5TG92 126 aa15.89■□□□□ 0.13
CCM2-201ENST00000258781 LRP1Q07954 4544 aaKnown RBP15.87■□□□□ 0.13
CCM2-201ENST00000258781 C8orf87E5RJ46 101 aa15.82■□□□□ 0.12
CCM2-201ENST00000258781 NOTCH2NLQ7Z3S9 236 aa15.82■□□□□ 0.12
CCM2-201ENST00000258781 LINC00304Q8N9R0 145 aa15.82■□□□□ 0.12
CCM2-201ENST00000258781 MP68P56378 58 aa15.82■□□□□ 0.12
CCM2-201ENST00000258781 RPS29P62273 56 aaKnown RBP15.82■□□□□ 0.12
CCM2-201ENST00000258781 SPAG11AQ6PDA7 123 aa15.82■□□□□ 0.12
CCM2-201ENST00000258781 ZCCHC13Q8WW36 166 aaKnown RBP15.82■□□□□ 0.12
CCM2-201ENST00000258781 MRPL34Q9BQ48 92 aaKnown RBP15.82■□□□□ 0.12
CCM2-201ENST00000258781 TP53AIP1Q9HCN2 124 aa15.81■□□□□ 0.12
CCM2-201ENST00000258781 FAT3Q8TDW7 4589 aa15.78■□□□□ 0.12
CCM2-201ENST00000258781 FLG2Q5D862 2391 aaPredicted RBP15.77■□□□□ 0.12
CCM2-201ENST00000258781 MYCBP2O75592 4640 aa15.77■□□□□ 0.11
CCM2-201ENST00000258781 FAM236DA0A1B0GTK5 79 aa15.76■□□□□ 0.11
CCM2-201ENST00000258781 H3BPC8 53 aa15.76■□□□□ 0.11
CCM2-201ENST00000258781 FAM236CP0DP71 79 aa15.76■□□□□ 0.11
CCM2-201ENST00000258781 H0Y9P7 68 aa15.76■□□□□ 0.11
CCM2-201ENST00000258781 TNXBP22105 4242 aa15.74■□□□□ 0.11
CCM2-201ENST00000258781 KRTAP4-5Q9BYR2 181 aa15.73■□□□□ 0.11
CCM2-201ENST00000258781 HERC2O95714 4834 aa15.72■□□□□ 0.11
CCM2-201ENST00000258781 TRAV22A0A0B4J277 110 aa15.71■□□□□ 0.11
CCM2-201ENST00000258781 NDUFS5O43920 106 aa15.69■□□□□ 0.1
CCM2-201ENST00000258781 LINC00313P59037 77 aa15.69■□□□□ 0.1
CCM2-201ENST00000258781 LINC00208Q96KT6 92 aa15.69■□□□□ 0.1
CCM2-201ENST00000258781 ATP5EP56381 51 aaPredicted RBP15.68■□□□□ 0.1
CCM2-201ENST00000258781 RPS28P62857 69 aaKnown RBP15.63■□□□□ 0.09
CCM2-201ENST00000258781 ABCA13Q86UQ4 5058 aa15.63■□□□□ 0.09
CCM2-201ENST00000258781 C1orf64Q8NEQ6 169 aa15.61■□□□□ 0.09
CCM2-201ENST00000258781 Q8N9P0 234 aaPredicted RBP15.54■□□□□ 0.08
CCM2-201ENST00000258781 KRTAP16-1A8MUX0 517 aa15.54■□□□□ 0.08
CCM2-201ENST00000258781 KRTAP10-8P60410 259 aa15.53■□□□□ 0.08
CCM2-201ENST00000258781 SERP1Q9Y6X1 66 aa15.51■□□□□ 0.07
CCM2-201ENST00000258781 KRTAP13-3Q3SY46 172 aa15.47■□□□□ 0.07
CCM2-201ENST00000258781 MT1HL1P0DM35 61 aa15.44■□□□□ 0.06
CCM2-201ENST00000258781 Q5W150 140 aa15.44■□□□□ 0.06
CCM2-201ENST00000258781 OXTP01178 125 aa15.41■□□□□ 0.06
CCM2-201ENST00000258781 SPANXA2-OT1Q8N9U9 137 aa15.41■□□□□ 0.06
CCM2-201ENST00000258781 LOC101927531A0A1B0GV80 90 aa15.39■□□□□ 0.05
CCM2-201ENST00000258781 CYP4F30PQ9H0H9 118 aa15.37■□□□□ 0.05
CCM2-201ENST00000258781 DMBT1Q9UGM3 2413 aaPredicted RBP15.37■□□□□ 0.05
CCM2-201ENST00000258781 PCOTHQ58A44 107 aa15.29■□□□□ 0.04
CCM2-201ENST00000258781 PRR4Q16378 134 aa15.27■□□□□ 0.04
CCM2-201ENST00000258781 RETNLBQ9BQ08 111 aa15.25■□□□□ 0.03
CCM2-201ENST00000258781 IGLV7-46A0A075B6I9 117 aa15.25■□□□□ 0.03
CCM2-201ENST00000258781 PCLOQ9Y6V0 5065 aa15.23■□□□□ 0.03
CCM2-201ENST00000258781 IGKV2-30P06310 120 aa15.18■□□□□ 0.02
CCM2-201ENST00000258781 C9orf92A6NGG3 77 aa15.16■□□□□ 0.02
CCM2-201ENST00000258781 SMIM26A0A096LP01 95 aa15.15■□□□□ 0.02
CCM2-201ENST00000258781 C20orf166-AS1Q96NR2 134 aa15.14■□□□□ 0.01
CCM2-201ENST00000258781 A8MUU9 505 aa15.12■□□□□ 0.01
CCM2-201ENST00000258781 FP248Q71RG6 208 aaPredicted RBP15.1■□□□□ 0.01
CCM2-201ENST00000258781 J3QL48 77 aa15.04■□□□□ -0
CCM2-201ENST00000258781 HRES1P13985 223 aa15.01□□□□□ -0.01
CCM2-201ENST00000258781 IGKV2D-30A0A075B6S6 120 aa15□□□□□ -0.01
CCM2-201ENST00000258781 Q75L30 129 aa14.95□□□□□ -0.02
CCM2-201ENST00000258781 COA5Q86WW8 74 aa14.95□□□□□ -0.02
CCM2-201ENST00000258781 C7orf65Q6ZTY9 151 aa14.93□□□□□ -0.02
CCM2-201ENST00000258781 DMAC1Q96GE9 116 aa14.87□□□□□ -0.03
CCM2-201ENST00000258781 ACYP2P14621 99 aa14.82□□□□□ -0.04
CCM2-201ENST00000258781 HERC1Q15751 4861 aa14.81□□□□□ -0.04
CCM2-201ENST00000258781 C4orf26Q17RF5 130 aa14.81□□□□□ -0.04
CCM2-201ENST00000258781 MPLKIPQ8TAP9 179 aa14.8□□□□□ -0.04
CCM2-201ENST00000258781 Q1T7F1 81 aa14.78□□□□□ -0.04
CCM2-201ENST00000258781 LPAP08519 4548 aa14.76□□□□□ -0.05
CCM2-201ENST00000258781 XP32Q5T750 250 aa14.73□□□□□ -0.05
CCM2-201ENST00000258781 RPL37P61927 97 aaKnown RBP14.72□□□□□ -0.05
CCM2-201ENST00000258781 V9GYY9 64 aa14.69□□□□□ -0.06
CCM2-201ENST00000258781 ATP11AUNQ6ZP68 121 aa14.69□□□□□ -0.06
CCM2-201ENST00000258781 SPINK7P58062 85 aa14.67□□□□□ -0.06
CCM2-201ENST00000258781 TPRXLQ17RH7 258 aa14.63□□□□□ -0.07
CCM2-201ENST00000258781 A8MUN3 132 aa14.61□□□□□ -0.07
CCM2-201ENST00000258781 LRP2P98164 4655 aa14.6□□□□□ -0.07
CCM2-201ENST00000258781 CHKB-CPT1BH3BT56 60 aa14.59□□□□□ -0.07
CCM2-201ENST00000258781 HMCN2Q8NDA2 5059 aa14.54□□□□□ -0.08
CCM2-201ENST00000258781 LINC01558Q9Y6Z2 57 aa14.47□□□□□ -0.09
CCM2-201ENST00000258781 PSPHP1O15172 72 aa14.46□□□□□ -0.1
CCM2-201ENST00000258781 PRR15LQ9BU68 103 aa14.4□□□□□ -0.1
CCM2-201ENST00000258781 KRTAP3-1Q9BYR8 98 aa14.4□□□□□ -0.1
CCM2-201ENST00000258781 COX6B2Q6YFQ2 88 aa14.38□□□□□ -0.11
CCM2-201ENST00000258781 Q5VV11 94 aa14.35□□□□□ -0.11
CCM2-201ENST00000258781 SPTSSBQ8NFR3 76 aa14.23□□□□□ -0.13
CCM2-201ENST00000258781 MUC17Q685J3 4493 aa14.17□□□□□ -0.14
CCM2-201ENST00000258781 BRK1Q8WUW1 75 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms