RNA–Protein interactions for RNA: ENST00000251691.4

ARFGEF3-201, Transcript of ARFGEF family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF3, Length 14,877 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3-201ENST00000251691 COL6A3P12111 3177 aa4.15□□□□□ -1.75
ARFGEF3-201ENST00000251691 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
ARFGEF3-201ENST00000251691 DMXL1Q9Y485 3027 aa4.12□□□□□ -1.75
ARFGEF3-201ENST00000251691 HIVEP1P15822 2718 aa4.12□□□□□ -1.75
ARFGEF3-201ENST00000251691 M0R2T5 61 aa4.12□□□□□ -1.75
ARFGEF3-201ENST00000251691 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
ARFGEF3-201ENST00000251691 H0YAA0 97 aa4.1□□□□□ -1.75
ARFGEF3-201ENST00000251691 KRTAP10-2P60368 255 aa4.1□□□□□ -1.75
ARFGEF3-201ENST00000251691 CELSR2Q9HCU4 2923 aa4.1□□□□□ -1.75
ARFGEF3-201ENST00000251691 SZT2Q5T011 3432 aa4.09□□□□□ -1.75
ARFGEF3-201ENST00000251691 ITPR2Q14571 2701 aa4.08□□□□□ -1.76
ARFGEF3-201ENST00000251691 ZZEF1O43149 2961 aa4.08□□□□□ -1.76
ARFGEF3-201ENST00000251691 ATMQ13315 3056 aa4.07□□□□□ -1.76
ARFGEF3-201ENST00000251691 KRTAP13-1Q8IUC0 172 aa4.06□□□□□ -1.76
ARFGEF3-201ENST00000251691 SPEGQ15772 3267 aa4.05□□□□□ -1.76
ARFGEF3-201ENST00000251691 CRYBG3Q68DQ2 2970 aa4.04□□□□□ -1.76
ARFGEF3-201ENST00000251691 P0C880 135 aa4.04□□□□□ -1.76
ARFGEF3-201ENST00000251691 KRTAP13-2Q52LG2 175 aa4.02□□□□□ -1.77
ARFGEF3-201ENST00000251691 NIPBLQ6KC79 2804 aaeCLIP4.01□□□□□ -1.77
ARFGEF3-201ENST00000251691 FLNCQ14315 2725 aa3.99□□□□□ -1.77
ARFGEF3-201ENST00000251691 DCHS2Q6V1P9 2916 aa3.99□□□□□ -1.77
ARFGEF3-201ENST00000251691 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
ARFGEF3-201ENST00000251691 TNRC18O15417 2968 aaPredicted RBP3.97□□□□□ -1.77
ARFGEF3-201ENST00000251691 TNP1P09430 55 aa3.96□□□□□ -1.77
ARFGEF3-201ENST00000251691 USP34Q70CQ2 3546 aa3.96□□□□□ -1.78
ARFGEF3-201ENST00000251691 Q6ZRN7 208 aaPredicted RBP3.96□□□□□ -1.78
ARFGEF3-201ENST00000251691 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
ARFGEF3-201ENST00000251691 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
ARFGEF3-201ENST00000251691 MYO15AQ9UKN7 3530 aa3.96□□□□□ -1.78
ARFGEF3-201ENST00000251691 SPTBN5Q9NRC6 3674 aaKnown RBP3.96□□□□□ -1.78
ARFGEF3-201ENST00000251691 TGP01266 2768 aa3.95□□□□□ -1.78
ARFGEF3-201ENST00000251691 Q5VSD8 79 aa3.95□□□□□ -1.78
ARFGEF3-201ENST00000251691 FBN2P35556 2912 aa3.93□□□□□ -1.78
ARFGEF3-201ENST00000251691 EYSQ5T1H1 3165 aa3.93□□□□□ -1.78
ARFGEF3-201ENST00000251691 ZANQ9Y493 2812 aa3.92□□□□□ -1.78
ARFGEF3-201ENST00000251691 PDZD2O15018 2839 aa3.92□□□□□ -1.78
ARFGEF3-201ENST00000251691 WDFY3Q8IZQ1 3526 aa3.91□□□□□ -1.78
ARFGEF3-201ENST00000251691 LOC400499M0QZD8 3231 aa3.89□□□□□ -1.79
ARFGEF3-201ENST00000251691 NF1P21359 2839 aa3.89□□□□□ -1.79
ARFGEF3-201ENST00000251691 CELSR1Q9NYQ6 3014 aa3.88□□□□□ -1.79
ARFGEF3-201ENST00000251691 TENM3Q9P273 2699 aa3.88□□□□□ -1.79
ARFGEF3-201ENST00000251691 DCHS1Q96JQ0 3298 aa3.86□□□□□ -1.79
ARFGEF3-201ENST00000251691 TPRXLQ17RH7 258 aa3.85□□□□□ -1.79
ARFGEF3-201ENST00000251691 CSMD1Q96PZ7 3565 aa3.83□□□□□ -1.8
ARFGEF3-201ENST00000251691 ASPMQ8IZT6 3477 aa3.83□□□□□ -1.8
ARFGEF3-201ENST00000251691 KRTAP13-3Q3SY46 172 aa3.82□□□□□ -1.8
ARFGEF3-201ENST00000251691 TENM4Q6N022 2769 aa3.8□□□□□ -1.8
ARFGEF3-201ENST00000251691 TENM1Q9UKZ4 2725 aa3.8□□□□□ -1.8
ARFGEF3-201ENST00000251691 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
ARFGEF3-201ENST00000251691 ZFHX4Q86UP3 3567 aa3.78□□□□□ -1.8
ARFGEF3-201ENST00000251691 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
ARFGEF3-201ENST00000251691 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
ARFGEF3-201ENST00000251691 ZFHX3Q15911 3703 aa3.76□□□□□ -1.81
ARFGEF3-201ENST00000251691 LAMA5O15230 3695 aa3.76□□□□□ -1.81
ARFGEF3-201ENST00000251691 DMDP11532 3685 aa3.75□□□□□ -1.81
ARFGEF3-201ENST00000251691 HRNRQ86YZ3 2850 aaPredicted RBP3.73□□□□□ -1.81
ARFGEF3-201ENST00000251691 RELNP78509 3460 aa3.73□□□□□ -1.81
ARFGEF3-201ENST00000251691 XP32Q5T750 250 aa3.73□□□□□ -1.81
ARFGEF3-201ENST00000251691 SMG1Q96Q15 3661 aaKnown RBP3.72□□□□□ -1.81
ARFGEF3-201ENST00000251691 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
ARFGEF3-201ENST00000251691 CUBNO60494 3623 aa3.71□□□□□ -1.81
ARFGEF3-201ENST00000251691 TENM2Q9NT68 2774 aa3.71□□□□□ -1.82
ARFGEF3-201ENST00000251691 MXRA5Q9NR99 2828 aa3.7□□□□□ -1.82
ARFGEF3-201ENST00000251691 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
ARFGEF3-201ENST00000251691 PKD1L1Q8TDX9 2849 aa3.69□□□□□ -1.82
ARFGEF3-201ENST00000251691 SVEP1Q4LDE5 3571 aa3.68□□□□□ -1.82
ARFGEF3-201ENST00000251691 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
ARFGEF3-201ENST00000251691 VWFP04275 2813 aa3.65□□□□□ -1.82
ARFGEF3-201ENST00000251691 KRTAP13-4Q3LI77 160 aa3.65□□□□□ -1.83
ARFGEF3-201ENST00000251691 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
ARFGEF3-201ENST00000251691 SPENQ96T58 3664 aaKnown RBP3.59□□□□□ -1.83
ARFGEF3-201ENST00000251691 KRTAP10-6P60371 365 aaPredicted RBP3.57□□□□□ -1.84
ARFGEF3-201ENST00000251691 MUC3AQ02505 3323 aa3.57□□□□□ -1.84
ARFGEF3-201ENST00000251691 NBPF19A0A087WUL8 3843 aa3.57□□□□□ -1.84
ARFGEF3-201ENST00000251691 MEGF8Q7Z7M0 2845 aa3.55□□□□□ -1.84
ARFGEF3-201ENST00000251691 COL7A1Q02388 2944 aa3.54□□□□□ -1.84
ARFGEF3-201ENST00000251691 INE1O15225 51 aa3.54□□□□□ -1.84
ARFGEF3-201ENST00000251691 FBN3Q75N90 2809 aa3.54□□□□□ -1.84
ARFGEF3-201ENST00000251691 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
ARFGEF3-201ENST00000251691 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
ARFGEF3-201ENST00000251691 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
ARFGEF3-201ENST00000251691 TRRAPQ9Y4A5 3859 aa3.48□□□□□ -1.85
ARFGEF3-201ENST00000251691 FBN1P35555 2871 aaKnown RBP3.48□□□□□ -1.85
ARFGEF3-201ENST00000251691 CSMD3Q7Z407 3707 aa3.47□□□□□ -1.85
ARFGEF3-201ENST00000251691 BSNQ9UPA5 3926 aa3.47□□□□□ -1.85
ARFGEF3-201ENST00000251691 KRTAP3-2Q9BYR7 98 aa3.44□□□□□ -1.86
ARFGEF3-201ENST00000251691 OTOGQ6ZRI0 2925 aa3.42□□□□□ -1.86
ARFGEF3-201ENST00000251691 VPS13CQ709C8 3753 aa3.42□□□□□ -1.86
ARFGEF3-201ENST00000251691 KRTAP3-3Q9BYR6 98 aa3.38□□□□□ -1.87
ARFGEF3-201ENST00000251691 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
ARFGEF3-201ENST00000251691 AKAP9Q99996 3911 aa3.32□□□□□ -1.88
ARFGEF3-201ENST00000251691 ALMS1Q8TCU4 4167 aa3.29□□□□□ -1.88
ARFGEF3-201ENST00000251691 CSMD2Q7Z408 3487 aa3.29□□□□□ -1.88
ARFGEF3-201ENST00000251691 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.9
ARFGEF3-201ENST00000251691 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
ARFGEF3-201ENST00000251691 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
ARFGEF3-201ENST00000251691 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
ARFGEF3-201ENST00000251691 ZNF469Q96JG9 3925 aaPredicted RBP3.15□□□□□ -1.9
ARFGEF3-201ENST00000251691 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
ARFGEF3-201ENST00000251691 HUWE1Q7Z6Z7 4374 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms