RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 A0A087X002 238 aa8.87□□□□□ -0.99
DDX49-201ENST00000247003 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
DDX49-201ENST00000247003 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
DDX49-201ENST00000247003 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
DDX49-201ENST00000247003 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -0.99
DDX49-201ENST00000247003 RYR2Q92736 4967 aa8.83□□□□□ -1
DDX49-201ENST00000247003 LIMD2Q9BT23 127 aa8.82□□□□□ -1
DDX49-201ENST00000247003 C8orf87E5RJ46 101 aa8.81□□□□□ -1
DDX49-201ENST00000247003 Q5XG85 94 aa8.81□□□□□ -1
DDX49-201ENST00000247003 CYP4F30PQ9H0H9 118 aa8.8□□□□□ -1
DDX49-201ENST00000247003 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
DDX49-201ENST00000247003 SPANXA2-OT1Q8N9U9 137 aa8.8□□□□□ -1
DDX49-201ENST00000247003 RYR3Q15413 4870 aa8.79□□□□□ -1
DDX49-201ENST00000247003 LRP1BQ9NZR2 4599 aa8.79□□□□□ -1
DDX49-201ENST00000247003 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1
DDX49-201ENST00000247003 PRR4Q16378 134 aa8.77□□□□□ -1
DDX49-201ENST00000247003 C4orf48Q5BLP8 95 aa8.77□□□□□ -1
DDX49-201ENST00000247003 NOTCH2NLQ7Z3S9 236 aa8.77□□□□□ -1.01
DDX49-201ENST00000247003 TYMSOSQ8TAI1 123 aa8.76□□□□□ -1.01
DDX49-201ENST00000247003 C4orf26Q17RF5 130 aa8.75□□□□□ -1.01
DDX49-201ENST00000247003 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
DDX49-201ENST00000247003 LINC00313P59037 77 aa8.73□□□□□ -1.01
DDX49-201ENST00000247003 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
DDX49-201ENST00000247003 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
DDX49-201ENST00000247003 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
DDX49-201ENST00000247003 SPINK1P00995 79 aa8.7□□□□□ -1.02
DDX49-201ENST00000247003 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
DDX49-201ENST00000247003 PKHD1P08F94 4074 aa8.68□□□□□ -1.02
DDX49-201ENST00000247003 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
DDX49-201ENST00000247003 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
DDX49-201ENST00000247003 IGLV7-46A0A075B6I9 117 aa8.66□□□□□ -1.02
DDX49-201ENST00000247003 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
DDX49-201ENST00000247003 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
DDX49-201ENST00000247003 SPAG11AQ6PDA7 123 aa8.64□□□□□ -1.03
DDX49-201ENST00000247003 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
DDX49-201ENST00000247003 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
DDX49-201ENST00000247003 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
DDX49-201ENST00000247003 Q8N9P0 234 aaPredicted RBP8.61□□□□□ -1.03
DDX49-201ENST00000247003 Q5W150 140 aa8.61□□□□□ -1.03
DDX49-201ENST00000247003 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
DDX49-201ENST00000247003 DYNC1H1Q14204 4646 aaKnown RBP8.58□□□□□ -1.04
DDX49-201ENST00000247003 Q1T7F1 81 aa8.58□□□□□ -1.04
DDX49-201ENST00000247003 V9GYY9 64 aa8.57□□□□□ -1.04
DDX49-201ENST00000247003 COA5Q86WW8 74 aa8.56□□□□□ -1.04
DDX49-201ENST00000247003 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
DDX49-201ENST00000247003 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.04
DDX49-201ENST00000247003 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.05
DDX49-201ENST00000247003 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
DDX49-201ENST00000247003 IGKV2-30P06310 120 aa8.48□□□□□ -1.05
DDX49-201ENST00000247003 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
DDX49-201ENST00000247003 BIRC6Q9NR09 4857 aa8.47□□□□□ -1.05
DDX49-201ENST00000247003 HRES1P13985 223 aa8.45□□□□□ -1.06
DDX49-201ENST00000247003 PSPHP1O15172 72 aa8.44□□□□□ -1.06
DDX49-201ENST00000247003 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
DDX49-201ENST00000247003 ACYP2P14621 99 aa8.43□□□□□ -1.06
DDX49-201ENST00000247003 BRK1Q8WUW1 75 aa8.43□□□□□ -1.06
DDX49-201ENST00000247003 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
DDX49-201ENST00000247003 FAT1Q14517 4588 aa8.41□□□□□ -1.06
DDX49-201ENST00000247003 PRO0628Q9UI54 55 aa8.4□□□□□ -1.06
DDX49-201ENST00000247003 PKHD1L1Q86WI1 4243 aa8.4□□□□□ -1.06
DDX49-201ENST00000247003 DMAC1Q96GE9 116 aa8.39□□□□□ -1.07
DDX49-201ENST00000247003 A8MUN3 132 aa8.38□□□□□ -1.07
DDX49-201ENST00000247003 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
DDX49-201ENST00000247003 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
DDX49-201ENST00000247003 C9orf92A6NGG3 77 aa8.35□□□□□ -1.07
DDX49-201ENST00000247003 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
DDX49-201ENST00000247003 Q5VSD8 79 aa8.34□□□□□ -1.07
DDX49-201ENST00000247003 Q5VV11 94 aa8.33□□□□□ -1.08
DDX49-201ENST00000247003 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
DDX49-201ENST00000247003 HSPG2P98160 4391 aa8.31□□□□□ -1.08
DDX49-201ENST00000247003 C20orf166-AS1Q96NR2 134 aa8.3□□□□□ -1.08
DDX49-201ENST00000247003 A8MUU9 505 aa8.29□□□□□ -1.08
DDX49-201ENST00000247003 RYR1P21817 5038 aa8.29□□□□□ -1.08
DDX49-201ENST00000247003 Q75L30 129 aa8.28□□□□□ -1.08
DDX49-201ENST00000247003 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
DDX49-201ENST00000247003 Q8N1X5 172 aa8.24□□□□□ -1.09
DDX49-201ENST00000247003 A6NED7 52 aa8.22□□□□□ -1.09
DDX49-201ENST00000247003 KRTAP10-8P60410 259 aa8.22□□□□□ -1.09
DDX49-201ENST00000247003 TNXBP22105 4242 aa8.15□□□□□ -1.1
DDX49-201ENST00000247003 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.11
DDX49-201ENST00000247003 A0A1B0GU69 56 aa8.13□□□□□ -1.11
DDX49-201ENST00000247003 SPINK7P58062 85 aa8.11□□□□□ -1.11
DDX49-201ENST00000247003 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
DDX49-201ENST00000247003 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
DDX49-201ENST00000247003 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
DDX49-201ENST00000247003 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
DDX49-201ENST00000247003 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
DDX49-201ENST00000247003 PCLOQ9Y6V0 5065 aa8.05□□□□□ -1.12
DDX49-201ENST00000247003 HERC2O95714 4834 aa8.05□□□□□ -1.12
DDX49-201ENST00000247003 LCA10Q71F78 164 aa8.04□□□□□ -1.12
DDX49-201ENST00000247003 A8MU10 97 aa8.03□□□□□ -1.12
DDX49-201ENST00000247003 RPL37P61927 97 aaKnown RBP8.03□□□□□ -1.12
DDX49-201ENST00000247003 SEC61GP60059 68 aa8□□□□□ -1.13
DDX49-201ENST00000247003 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
DDX49-201ENST00000247003 XP32Q5T750 250 aa7.99□□□□□ -1.13
DDX49-201ENST00000247003 COX6B2Q6YFQ2 88 aa7.98□□□□□ -1.13
DDX49-201ENST00000247003 MYCBP2O75592 4640 aa7.96□□□□□ -1.14
DDX49-201ENST00000247003 PMAIP1Q13794 54 aa7.96□□□□□ -1.14
DDX49-201ENST00000247003 KRTAP4-5Q9BYR2 181 aa7.96□□□□□ -1.14
DDX49-201ENST00000247003 UQCR11O14957 56 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms