RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
HDHD3-201ENST00000238379 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
HDHD3-201ENST00000238379 MMP24-AS1A0A0U1RRL7 71 aa8.66□□□□□ -1.02
HDHD3-201ENST00000238379 WFDC13Q8IUB5 93 aa8.66□□□□□ -1.02
HDHD3-201ENST00000238379 SMIM20Q8N5G0 67 aa8.66□□□□□ -1.02
HDHD3-201ENST00000238379 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.02
HDHD3-201ENST00000238379 COX7CP15954 63 aa8.65□□□□□ -1.02
HDHD3-201ENST00000238379 KRTAP10-8P60410 259 aa8.65□□□□□ -1.02
HDHD3-201ENST00000238379 TRAV7A0A075B6U4 112 aa8.64□□□□□ -1.03
HDHD3-201ENST00000238379 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
HDHD3-201ENST00000238379 OCR1Q9BZK8 76 aa8.64□□□□□ -1.03
HDHD3-201ENST00000238379 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
HDHD3-201ENST00000238379 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
HDHD3-201ENST00000238379 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
HDHD3-201ENST00000238379 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
HDHD3-201ENST00000238379 UQCRQO14949 82 aa8.61□□□□□ -1.03
HDHD3-201ENST00000238379 hDV103S1A0JD37 113 aa8.6□□□□□ -1.03
HDHD3-201ENST00000238379 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
HDHD3-201ENST00000238379 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
HDHD3-201ENST00000238379 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
HDHD3-201ENST00000238379 TMEM254Q8TBM7 123 aa8.54□□□□□ -1.04
HDHD3-201ENST00000238379 MT1HL1P0DM35 61 aa8.53□□□□□ -1.04
HDHD3-201ENST00000238379 LINC00313P59037 77 aa8.53□□□□□ -1.04
HDHD3-201ENST00000238379 MRPL34Q9BQ48 92 aaKnown RBP8.53□□□□□ -1.04
HDHD3-201ENST00000238379 C20orf197Q8N268 126 aa8.51□□□□□ -1.05
HDHD3-201ENST00000238379 TNXBP22105 4242 aa8.51□□□□□ -1.05
HDHD3-201ENST00000238379 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
HDHD3-201ENST00000238379 RETNLBQ9BQ08 111 aa8.49□□□□□ -1.05
HDHD3-201ENST00000238379 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
HDHD3-201ENST00000238379 MYCBP2O75592 4640 aa8.48□□□□□ -1.05
HDHD3-201ENST00000238379 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
HDHD3-201ENST00000238379 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
HDHD3-201ENST00000238379 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
HDHD3-201ENST00000238379 OXTP01178 125 aa8.46□□□□□ -1.06
HDHD3-201ENST00000238379 TP53AIP1Q9HCN2 124 aa8.46□□□□□ -1.06
HDHD3-201ENST00000238379 NDUFS5O43920 106 aa8.45□□□□□ -1.06
HDHD3-201ENST00000238379 KLKP1Q107X0 134 aa8.45□□□□□ -1.06
HDHD3-201ENST00000238379 Q8N9P0 234 aaPredicted RBP8.44□□□□□ -1.06
HDHD3-201ENST00000238379 SNURFQ9Y675 71 aa8.44□□□□□ -1.06
HDHD3-201ENST00000238379 A0A0U1RQV1 116 aa8.43□□□□□ -1.06
HDHD3-201ENST00000238379 BIRC6Q9NR09 4857 aa8.43□□□□□ -1.06
HDHD3-201ENST00000238379 TRAV22A0A0B4J277 110 aa8.4□□□□□ -1.07
HDHD3-201ENST00000238379 H0Y9P7 68 aa8.4□□□□□ -1.07
HDHD3-201ENST00000238379 MP68P56378 58 aa8.39□□□□□ -1.07
HDHD3-201ENST00000238379 ZCCHC13Q8WW36 166 aaKnown RBP8.38□□□□□ -1.07
HDHD3-201ENST00000238379 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
HDHD3-201ENST00000238379 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
HDHD3-201ENST00000238379 HERC2O95714 4834 aa8.36□□□□□ -1.07
HDHD3-201ENST00000238379 H7BZZ5 65 aa8.36□□□□□ -1.07
HDHD3-201ENST00000238379 Q5W150 140 aa8.36□□□□□ -1.07
HDHD3-201ENST00000238379 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
HDHD3-201ENST00000238379 H3BPC8 53 aa8.35□□□□□ -1.07
HDHD3-201ENST00000238379 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
HDHD3-201ENST00000238379 NDUFC1O43677 76 aa8.33□□□□□ -1.08
HDHD3-201ENST00000238379 C1orf64Q8NEQ6 169 aa8.32□□□□□ -1.08
HDHD3-201ENST00000238379 ABCA13Q86UQ4 5058 aa8.32□□□□□ -1.08
HDHD3-201ENST00000238379 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
HDHD3-201ENST00000238379 C20orf166-AS1Q96NR2 134 aa8.29□□□□□ -1.08
HDHD3-201ENST00000238379 A8MUU9 505 aa8.28□□□□□ -1.08
HDHD3-201ENST00000238379 TMEM258P61165 79 aa8.28□□□□□ -1.08
HDHD3-201ENST00000238379 H3BS24 57 aa8.25□□□□□ -1.09
HDHD3-201ENST00000238379 LOC101927531A0A1B0GV80 90 aa8.23□□□□□ -1.09
HDHD3-201ENST00000238379 PRR4Q16378 134 aa8.23□□□□□ -1.09
HDHD3-201ENST00000238379 Q75L30 129 aa8.21□□□□□ -1.1
HDHD3-201ENST00000238379 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
HDHD3-201ENST00000238379 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
HDHD3-201ENST00000238379 CYP4F30PQ9H0H9 118 aa8.19□□□□□ -1.1
HDHD3-201ENST00000238379 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
HDHD3-201ENST00000238379 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
HDHD3-201ENST00000238379 XP32Q5T750 250 aa8.17□□□□□ -1.1
HDHD3-201ENST00000238379 TPRXLQ17RH7 258 aa8.15□□□□□ -1.11
HDHD3-201ENST00000238379 ATP5EP56381 51 aaPredicted RBP8.13□□□□□ -1.11
HDHD3-201ENST00000238379 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
HDHD3-201ENST00000238379 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
HDHD3-201ENST00000238379 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
HDHD3-201ENST00000238379 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
HDHD3-201ENST00000238379 C7orf65Q6ZTY9 151 aa8.08□□□□□ -1.12
HDHD3-201ENST00000238379 HRES1P13985 223 aa8.06□□□□□ -1.12
HDHD3-201ENST00000238379 PCLOQ9Y6V0 5065 aa8.06□□□□□ -1.12
HDHD3-201ENST00000238379 RPS28P62857 69 aaKnown RBP8.04□□□□□ -1.12
HDHD3-201ENST00000238379 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
HDHD3-201ENST00000238379 SPINK7P58062 85 aa8.02□□□□□ -1.13
HDHD3-201ENST00000238379 LPAP08519 4548 aa7.96□□□□□ -1.13
HDHD3-201ENST00000238379 LRP2P98164 4655 aa7.95□□□□□ -1.14
HDHD3-201ENST00000238379 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
HDHD3-201ENST00000238379 C4orf26Q17RF5 130 aa7.93□□□□□ -1.14
HDHD3-201ENST00000238379 COA5Q86WW8 74 aa7.89□□□□□ -1.15
HDHD3-201ENST00000238379 ACYP2P14621 99 aa7.88□□□□□ -1.15
HDHD3-201ENST00000238379 HERC1Q15751 4861 aa7.86□□□□□ -1.15
HDHD3-201ENST00000238379 SEC61BP60468 96 aaKnown RBP7.85□□□□□ -1.15
HDHD3-201ENST00000238379 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
HDHD3-201ENST00000238379 A8MUN3 132 aa7.83□□□□□ -1.16
HDHD3-201ENST00000238379 SMIM26A0A096LP01 95 aa7.82□□□□□ -1.16
HDHD3-201ENST00000238379 COX6B2Q6YFQ2 88 aa7.82□□□□□ -1.16
HDHD3-201ENST00000238379 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
HDHD3-201ENST00000238379 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
HDHD3-201ENST00000238379 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
HDHD3-201ENST00000238379 KRTAP4-1Q9BYQ7 146 aa7.73□□□□□ -1.17
HDHD3-201ENST00000238379 Q1T7F1 81 aa7.67□□□□□ -1.18
HDHD3-201ENST00000238379 RBM12B-AS1Q9P1G2 102 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms