RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 XP32Q5T750 250 aa4.25□□□□□ -1.73
GGCX-201ENST00000233838 EYSQ5T1H1 3165 aa4.24□□□□□ -1.73
GGCX-201ENST00000233838 KALRNO60229 2985 aa4.23□□□□□ -1.73
GGCX-201ENST00000233838 SETXQ7Z333 2677 aaKnown RBP4.22□□□□□ -1.73
GGCX-201ENST00000233838 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
GGCX-201ENST00000233838 DMXL1Q9Y485 3027 aa4.22□□□□□ -1.73
GGCX-201ENST00000233838 MAP1AP78559 2803 aaPredicted RBP4.21□□□□□ -1.74
GGCX-201ENST00000233838 COL6A5A8TX70 2615 aa4.21□□□□□ -1.74
GGCX-201ENST00000233838 H0YAA0 97 aa4.2□□□□□ -1.74
GGCX-201ENST00000233838 ZZEF1O43149 2961 aa4.19□□□□□ -1.74
GGCX-201ENST00000233838 NBEAQ8NFP9 2946 aa4.19□□□□□ -1.74
GGCX-201ENST00000233838 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
GGCX-201ENST00000233838 BOD1L1Q8NFC6 3051 aa4.18□□□□□ -1.74
GGCX-201ENST00000233838 NBEAL2Q6ZNJ1 2754 aa4.18□□□□□ -1.74
GGCX-201ENST00000233838 ATMQ13315 3056 aa4.18□□□□□ -1.74
GGCX-201ENST00000233838 ADGRG4Q8IZF6 3080 aa4.17□□□□□ -1.74
GGCX-201ENST00000233838 P0C880 135 aa4.17□□□□□ -1.74
GGCX-201ENST00000233838 UTP20O75691 2785 aaKnown RBP4.17□□□□□ -1.74
GGCX-201ENST00000233838 ITPR2Q14571 2701 aa4.16□□□□□ -1.74
GGCX-201ENST00000233838 COL12A1Q99715 3063 aa4.16□□□□□ -1.74
GGCX-201ENST00000233838 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.74
GGCX-201ENST00000233838 HRNRQ86YZ3 2850 aaPredicted RBP4.15□□□□□ -1.75
GGCX-201ENST00000233838 MYO15AQ9UKN7 3530 aa4.14□□□□□ -1.75
GGCX-201ENST00000233838 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
GGCX-201ENST00000233838 SPEGQ15772 3267 aa4.13□□□□□ -1.75
GGCX-201ENST00000233838 ITPR1Q14643 2758 aa4.12□□□□□ -1.75
GGCX-201ENST00000233838 KRTAP21-3Q3LHN1 58 aa4.11□□□□□ -1.75
GGCX-201ENST00000233838 APCP25054 2843 aa4.1□□□□□ -1.75
GGCX-201ENST00000233838 HIVEP1P15822 2718 aa4.1□□□□□ -1.75
GGCX-201ENST00000233838 UBR5O95071 2799 aaPredicted RBP4.1□□□□□ -1.75
GGCX-201ENST00000233838 NOTCH1P46531 2555 aa4.09□□□□□ -1.75
GGCX-201ENST00000233838 TACC2O95359 2948 aa4.09□□□□□ -1.75
GGCX-201ENST00000233838 WDFY3Q8IZQ1 3526 aa4.08□□□□□ -1.76
GGCX-201ENST00000233838 STAB2Q8WWQ8 2551 aa4.07□□□□□ -1.76
GGCX-201ENST00000233838 NSD1Q96L73 2696 aaPredicted RBP4.06□□□□□ -1.76
GGCX-201ENST00000233838 KRTAP13-3Q3SY46 172 aa4.05□□□□□ -1.76
GGCX-201ENST00000233838 LOC400499M0QZD8 3231 aa4.04□□□□□ -1.76
GGCX-201ENST00000233838 DCHS1Q96JQ0 3298 aa4.01□□□□□ -1.77
GGCX-201ENST00000233838 KRTAP12-2P59991 146 aa4□□□□□ -1.77
GGCX-201ENST00000233838 CFAP47Q6ZTR5 3102 aa4□□□□□ -1.77
GGCX-201ENST00000233838 MUC3AQ02505 3323 aa3.99□□□□□ -1.77
GGCX-201ENST00000233838 ZANQ9Y493 2812 aa3.98□□□□□ -1.77
GGCX-201ENST00000233838 CELSR2Q9HCU4 2923 aa3.96□□□□□ -1.78
GGCX-201ENST00000233838 ASPMQ8IZT6 3477 aa3.95□□□□□ -1.78
GGCX-201ENST00000233838 CRYBG3Q68DQ2 2970 aa3.94□□□□□ -1.78
GGCX-201ENST00000233838 TENM4Q6N022 2769 aa3.94□□□□□ -1.78
GGCX-201ENST00000233838 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
GGCX-201ENST00000233838 NIPBLQ6KC79 2804 aaeCLIP3.92□□□□□ -1.78
GGCX-201ENST00000233838 ASH1LQ9NR48 2969 aaKnown RBP3.91□□□□□ -1.78
GGCX-201ENST00000233838 ZFHX4Q86UP3 3567 aa3.9□□□□□ -1.79
GGCX-201ENST00000233838 DMDP11532 3685 aa3.9□□□□□ -1.79
GGCX-201ENST00000233838 CSMD1Q96PZ7 3565 aa3.88□□□□□ -1.79
GGCX-201ENST00000233838 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
GGCX-201ENST00000233838 DCHS2Q6V1P9 2916 aa3.88□□□□□ -1.79
GGCX-201ENST00000233838 FBN2P35556 2912 aa3.87□□□□□ -1.79
GGCX-201ENST00000233838 LAMA5O15230 3695 aa3.87□□□□□ -1.79
GGCX-201ENST00000233838 NF1P21359 2839 aa3.87□□□□□ -1.79
GGCX-201ENST00000233838 RELNP78509 3460 aa3.86□□□□□ -1.79
GGCX-201ENST00000233838 SMG1Q96Q15 3661 aaKnown RBP3.85□□□□□ -1.79
GGCX-201ENST00000233838 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
GGCX-201ENST00000233838 MXRA5Q9NR99 2828 aa3.84□□□□□ -1.79
GGCX-201ENST00000233838 PDZD2O15018 2839 aa3.84□□□□□ -1.8
GGCX-201ENST00000233838 BSNQ9UPA5 3926 aa3.83□□□□□ -1.8
GGCX-201ENST00000233838 ANK3Q12955 4377 aaKnown RBP3.82□□□□□ -1.8
GGCX-201ENST00000233838 CELSR1Q9NYQ6 3014 aa3.79□□□□□ -1.8
GGCX-201ENST00000233838 NBPF19A0A087WUL8 3843 aa3.79□□□□□ -1.8
GGCX-201ENST00000233838 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
GGCX-201ENST00000233838 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
GGCX-201ENST00000233838 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
GGCX-201ENST00000233838 KRTAP3-1Q9BYR8 98 aa3.73□□□□□ -1.81
GGCX-201ENST00000233838 TENM3Q9P273 2699 aa3.71□□□□□ -1.82
GGCX-201ENST00000233838 SVEP1Q4LDE5 3571 aa3.68□□□□□ -1.82
GGCX-201ENST00000233838 TENM1Q9UKZ4 2725 aa3.68□□□□□ -1.82
GGCX-201ENST00000233838 TGP01266 2768 aa3.65□□□□□ -1.82
GGCX-201ENST00000233838 AKAP9Q99996 3911 aa3.65□□□□□ -1.82
GGCX-201ENST00000233838 INE1O15225 51 aa3.64□□□□□ -1.83
GGCX-201ENST00000233838 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
GGCX-201ENST00000233838 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
GGCX-201ENST00000233838 HUWE1Q7Z6Z7 4374 aaKnown RBP3.62□□□□□ -1.83
GGCX-201ENST00000233838 CUBNO60494 3623 aa3.61□□□□□ -1.83
GGCX-201ENST00000233838 VPS13CQ709C8 3753 aa3.6□□□□□ -1.83
GGCX-201ENST00000233838 ZFHX3Q15911 3703 aa3.59□□□□□ -1.83
GGCX-201ENST00000233838 FBN1P35555 2871 aaKnown RBP3.58□□□□□ -1.84
GGCX-201ENST00000233838 VWFP04275 2813 aa3.58□□□□□ -1.84
GGCX-201ENST00000233838 TENM2Q9NT68 2774 aa3.58□□□□□ -1.84
GGCX-201ENST00000233838 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
GGCX-201ENST00000233838 TRRAPQ9Y4A5 3859 aa3.56□□□□□ -1.84
GGCX-201ENST00000233838 PKD1L1Q8TDX9 2849 aa3.54□□□□□ -1.84
GGCX-201ENST00000233838 CSMD2Q7Z408 3487 aa3.53□□□□□ -1.84
GGCX-201ENST00000233838 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
GGCX-201ENST00000233838 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
GGCX-201ENST00000233838 KRTAP3-3Q9BYR6 98 aa3.48□□□□□ -1.85
GGCX-201ENST00000233838 KRTAP3-2Q9BYR7 98 aa3.47□□□□□ -1.85
GGCX-201ENST00000233838 MT1HL1P0DM35 61 aa3.47□□□□□ -1.85
GGCX-201ENST00000233838 KRTAP10-4P60372 401 aaPredicted RBP3.45□□□□□ -1.86
GGCX-201ENST00000233838 ZNF469Q96JG9 3925 aaPredicted RBP3.43□□□□□ -1.86
GGCX-201ENST00000233838 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
GGCX-201ENST00000233838 DNAH3Q8TD57 4116 aa3.41□□□□□ -1.86
GGCX-201ENST00000233838 FBN3Q75N90 2809 aa3.41□□□□□ -1.86
GGCX-201ENST00000233838 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms