RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 K7EQZ3 153 aa6.31□□□□□ -1.4
CDCA3-201ENST00000229265 MOBPQ13875 183 aa6.31□□□□□ -1.4
CDCA3-201ENST00000229265 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
CDCA3-201ENST00000229265 A0A0G2JQZ4 141 aa6.3□□□□□ -1.4
CDCA3-201ENST00000229265 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
CDCA3-201ENST00000229265 TMEM258P61165 79 aa6.3□□□□□ -1.4
CDCA3-201ENST00000229265 Q8N9L7 120 aa6.3□□□□□ -1.4
CDCA3-201ENST00000229265 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
CDCA3-201ENST00000229265 KRTAP29-1A8MX34 341 aaPredicted RBP6.28□□□□□ -1.4
CDCA3-201ENST00000229265 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
CDCA3-201ENST00000229265 H3BPC8 53 aa6.27□□□□□ -1.41
CDCA3-201ENST00000229265 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
CDCA3-201ENST00000229265 Q96NJ1 140 aa6.27□□□□□ -1.41
CDCA3-201ENST00000229265 TP53AIP1Q9HCN2 124 aa6.26□□□□□ -1.41
CDCA3-201ENST00000229265 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
CDCA3-201ENST00000229265 TMEM254Q8TBM7 123 aa6.25□□□□□ -1.41
CDCA3-201ENST00000229265 RPS29P62273 56 aaKnown RBP6.24□□□□□ -1.41
CDCA3-201ENST00000229265 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
CDCA3-201ENST00000229265 LRP2P98164 4655 aa6.23□□□□□ -1.41
CDCA3-201ENST00000229265 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
CDCA3-201ENST00000229265 DEFB116Q30KQ4 102 aa6.23□□□□□ -1.41
CDCA3-201ENST00000229265 LIMD2Q9BT23 127 aa6.23□□□□□ -1.41
CDCA3-201ENST00000229265 ANAPC11Q9NYG5 84 aa6.23□□□□□ -1.41
CDCA3-201ENST00000229265 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
CDCA3-201ENST00000229265 SPINK1P00995 79 aa6.22□□□□□ -1.41
CDCA3-201ENST00000229265 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
CDCA3-201ENST00000229265 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
CDCA3-201ENST00000229265 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
CDCA3-201ENST00000229265 hDV103S1A0JD37 113 aa6.21□□□□□ -1.42
CDCA3-201ENST00000229265 C8orf87E5RJ46 101 aa6.21□□□□□ -1.42
CDCA3-201ENST00000229265 H7BZZ5 65 aa6.21□□□□□ -1.42
CDCA3-201ENST00000229265 C4orf48Q5BLP8 95 aa6.21□□□□□ -1.42
CDCA3-201ENST00000229265 MP68P56378 58 aa6.2□□□□□ -1.42
CDCA3-201ENST00000229265 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
CDCA3-201ENST00000229265 HRCT1Q6UXD1 115 aa6.2□□□□□ -1.42
CDCA3-201ENST00000229265 C8orf17Q9NRJ1 99 aa6.2□□□□□ -1.42
CDCA3-201ENST00000229265 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
CDCA3-201ENST00000229265 J3QL48 77 aa6.19□□□□□ -1.42
CDCA3-201ENST00000229265 LPAP08519 4548 aa6.18□□□□□ -1.42
CDCA3-201ENST00000229265 A0A087X002 238 aa6.18□□□□□ -1.42
CDCA3-201ENST00000229265 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
CDCA3-201ENST00000229265 TYMSOSQ8TAI1 123 aa6.17□□□□□ -1.42
CDCA3-201ENST00000229265 ZCCHC13Q8WW36 166 aaKnown RBP6.17□□□□□ -1.42
CDCA3-201ENST00000229265 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
CDCA3-201ENST00000229265 CYSTM1Q9H1C7 97 aa6.14□□□□□ -1.43
CDCA3-201ENST00000229265 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
CDCA3-201ENST00000229265 IGHV6-1A0A0B4J1U7 121 aa6.13□□□□□ -1.43
CDCA3-201ENST00000229265 C1orf195Q5TG92 126 aa6.13□□□□□ -1.43
CDCA3-201ENST00000229265 FAM236DA0A1B0GTK5 79 aa6.12□□□□□ -1.43
CDCA3-201ENST00000229265 OXTP01178 125 aa6.12□□□□□ -1.43
CDCA3-201ENST00000229265 FAM236CP0DP71 79 aa6.12□□□□□ -1.43
CDCA3-201ENST00000229265 LINC00313P59037 77 aa6.12□□□□□ -1.43
CDCA3-201ENST00000229265 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
CDCA3-201ENST00000229265 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
CDCA3-201ENST00000229265 SPANXA2-OT1Q8N9U9 137 aa6.1□□□□□ -1.43
CDCA3-201ENST00000229265 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
CDCA3-201ENST00000229265 H0Y9P7 68 aa6.09□□□□□ -1.43
CDCA3-201ENST00000229265 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.43
CDCA3-201ENST00000229265 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
CDCA3-201ENST00000229265 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
CDCA3-201ENST00000229265 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
CDCA3-201ENST00000229265 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
CDCA3-201ENST00000229265 CYP4F30PQ9H0H9 118 aa6.07□□□□□ -1.44
CDCA3-201ENST00000229265 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
CDCA3-201ENST00000229265 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
CDCA3-201ENST00000229265 NDUFS5O43920 106 aa6.03□□□□□ -1.44
CDCA3-201ENST00000229265 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.45
CDCA3-201ENST00000229265 IGLV7-46A0A075B6I9 117 aa6.01□□□□□ -1.45
CDCA3-201ENST00000229265 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
CDCA3-201ENST00000229265 KRTAP16-1A8MUX0 517 aa5.98□□□□□ -1.45
CDCA3-201ENST00000229265 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
CDCA3-201ENST00000229265 Q5W150 140 aa5.93□□□□□ -1.46
CDCA3-201ENST00000229265 FP248Q71RG6 208 aaPredicted RBP5.92□□□□□ -1.46
CDCA3-201ENST00000229265 IGKV2-30P06310 120 aa5.89□□□□□ -1.47
CDCA3-201ENST00000229265 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
CDCA3-201ENST00000229265 V9GYY9 64 aa5.89□□□□□ -1.47
CDCA3-201ENST00000229265 A8MUU9 505 aa5.88□□□□□ -1.47
CDCA3-201ENST00000229265 LCE2BO14633 110 aa5.88□□□□□ -1.47
CDCA3-201ENST00000229265 MUC2Q02817 5179 aa5.86□□□□□ -1.47
CDCA3-201ENST00000229265 ACYP2P14621 99 aa5.86□□□□□ -1.47
CDCA3-201ENST00000229265 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
CDCA3-201ENST00000229265 Q1T7F1 81 aa5.85□□□□□ -1.47
CDCA3-201ENST00000229265 PCOTHQ58A44 107 aa5.85□□□□□ -1.47
CDCA3-201ENST00000229265 Q75L30 129 aa5.82□□□□□ -1.48
CDCA3-201ENST00000229265 HRES1P13985 223 aa5.8□□□□□ -1.48
CDCA3-201ENST00000229265 C7orf65Q6ZTY9 151 aa5.8□□□□□ -1.48
CDCA3-201ENST00000229265 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
CDCA3-201ENST00000229265 A8MUN3 132 aa5.79□□□□□ -1.48
CDCA3-201ENST00000229265 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
CDCA3-201ENST00000229265 PRR4Q16378 134 aa5.78□□□□□ -1.48
CDCA3-201ENST00000229265 COA5Q86WW8 74 aa5.78□□□□□ -1.48
CDCA3-201ENST00000229265 RETNLBQ9BQ08 111 aa5.78□□□□□ -1.48
CDCA3-201ENST00000229265 C4orf26Q17RF5 130 aa5.74□□□□□ -1.49
CDCA3-201ENST00000229265 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
CDCA3-201ENST00000229265 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
CDCA3-201ENST00000229265 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
CDCA3-201ENST00000229265 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
CDCA3-201ENST00000229265 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
CDCA3-201ENST00000229265 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
CDCA3-201ENST00000229265 SPINK7P58062 85 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms