RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 KRTAP13-2Q52LG2 175 aa15.24■□□□□ 0.03
RTN4R-201ENST00000043402 C1orf64Q8NEQ6 169 aa15.24■□□□□ 0.03
RTN4R-201ENST00000043402 TRAV22A0A0B4J277 110 aa15.23■□□□□ 0.03
RTN4R-201ENST00000043402 CDK2AP2O75956 126 aa15.22■□□□□ 0.03
RTN4R-201ENST00000043402 NOTCH2NLQ7Z3S9 236 aa15.22■□□□□ 0.03
RTN4R-201ENST00000043402 MPLKIPQ8TAP9 179 aa15.22■□□□□ 0.03
RTN4R-201ENST00000043402 CYP4F30PQ9H0H9 118 aa15.21■□□□□ 0.03
RTN4R-201ENST00000043402 SPINK6Q6UWN8 80 aa15.21■□□□□ 0.02
RTN4R-201ENST00000043402 H3BPC8 53 aa15.2■□□□□ 0.02
RTN4R-201ENST00000043402 LINC00336Q6ZUF6 198 aa15.18■□□□□ 0.02
RTN4R-201ENST00000043402 KRTAP1-4P0C5Y4 121 aa15.17■□□□□ 0.02
RTN4R-201ENST00000043402 PRR4Q16378 134 aa15.17■□□□□ 0.02
RTN4R-201ENST00000043402 MRPL34Q9BQ48 92 aaKnown RBP15.11■□□□□ 0.01
RTN4R-201ENST00000043402 TP53AIP1Q9HCN2 124 aa15.11■□□□□ 0.01
RTN4R-201ENST00000043402 DYNC1H1Q14204 4646 aaKnown RBP15.09■□□□□ 0.01
RTN4R-201ENST00000043402 NDUFS5O43920 106 aa15.07■□□□□ 0
RTN4R-201ENST00000043402 SPANXA2-OT1Q8N9U9 137 aa15.07■□□□□ 0
RTN4R-201ENST00000043402 PRO0628Q9UI54 55 aa15.04■□□□□ -0
RTN4R-201ENST00000043402 Q1T7F1 81 aa15.01□□□□□ -0.01
RTN4R-201ENST00000043402 PLA2G1BP04054 148 aaKnown RBP15□□□□□ -0.01
RTN4R-201ENST00000043402 C1orf195Q5TG92 126 aa15□□□□□ -0.01
RTN4R-201ENST00000043402 A0A1B0GVY2 172 aa14.97□□□□□ -0.01
RTN4R-201ENST00000043402 RYR2Q92736 4967 aa14.95□□□□□ -0.02
RTN4R-201ENST00000043402 BRK1Q8WUW1 75 aa14.94□□□□□ -0.02
RTN4R-201ENST00000043402 C8orf87E5RJ46 101 aa14.92□□□□□ -0.02
RTN4R-201ENST00000043402 APOBP04114 4563 aaKnown RBP14.92□□□□□ -0.02
RTN4R-201ENST00000043402 SMR3BP02814 79 aaPredicted RBP14.91□□□□□ -0.02
RTN4R-201ENST00000043402 TYMSOSQ8TAI1 123 aa14.9□□□□□ -0.02
RTN4R-201ENST00000043402 KMT2CQ8NEZ4 4911 aaKnown RBP14.89□□□□□ -0.03
RTN4R-201ENST00000043402 FAT1Q14517 4588 aa14.89□□□□□ -0.03
RTN4R-201ENST00000043402 PCOTHQ58A44 107 aa14.88□□□□□ -0.03
RTN4R-201ENST00000043402 Q5W150 140 aa14.88□□□□□ -0.03
RTN4R-201ENST00000043402 LINC00313P59037 77 aa14.87□□□□□ -0.03
RTN4R-201ENST00000043402 IGLV7-46A0A075B6I9 117 aa14.86□□□□□ -0.03
RTN4R-201ENST00000043402 LIMD2Q9BT23 127 aa14.86□□□□□ -0.03
RTN4R-201ENST00000043402 KRTAP13-3Q3SY46 172 aa14.85□□□□□ -0.03
RTN4R-201ENST00000043402 V9GYY9 64 aa14.82□□□□□ -0.04
RTN4R-201ENST00000043402 C4orf48Q5BLP8 95 aa14.81□□□□□ -0.04
RTN4R-201ENST00000043402 PRR26Q8N8Z3 221 aa14.81□□□□□ -0.04
RTN4R-201ENST00000043402 PSPHP1O15172 72 aa14.8□□□□□ -0.04
RTN4R-201ENST00000043402 SPINK1P00995 79 aa14.78□□□□□ -0.04
RTN4R-201ENST00000043402 Q8N9P0 234 aaPredicted RBP14.77□□□□□ -0.05
RTN4R-201ENST00000043402 KRTAP10-4P60372 401 aaPredicted RBP14.76□□□□□ -0.05
RTN4R-201ENST00000043402 KRTAP16-1A8MUX0 517 aa14.75□□□□□ -0.05
RTN4R-201ENST00000043402 COA5Q86WW8 74 aa14.73□□□□□ -0.05
RTN4R-201ENST00000043402 LOC101927531A0A1B0GV80 90 aa14.72□□□□□ -0.05
RTN4R-201ENST00000043402 A8MUN3 132 aa14.7□□□□□ -0.06
RTN4R-201ENST00000043402 LINC00304Q8N9R0 145 aa14.7□□□□□ -0.06
RTN4R-201ENST00000043402 PKHD1L1Q86WI1 4243 aa14.65□□□□□ -0.06
RTN4R-201ENST00000043402 RETNLBQ9BQ08 111 aa14.64□□□□□ -0.07
RTN4R-201ENST00000043402 FAM229AH3BQW9 127 aa14.63□□□□□ -0.07
RTN4R-201ENST00000043402 RPS29P62273 56 aaKnown RBP14.62□□□□□ -0.07
RTN4R-201ENST00000043402 Q5VV11 94 aa14.61□□□□□ -0.07
RTN4R-201ENST00000043402 SPAG11AQ6PDA7 123 aa14.6□□□□□ -0.07
RTN4R-201ENST00000043402 PRR15LQ9BU68 103 aa14.54□□□□□ -0.08
RTN4R-201ENST00000043402 HRES1P13985 223 aa14.51□□□□□ -0.09
RTN4R-201ENST00000043402 IGKV2-30P06310 120 aa14.5□□□□□ -0.09
RTN4R-201ENST00000043402 CHKB-CPT1BH3BT56 60 aa14.48□□□□□ -0.09
RTN4R-201ENST00000043402 RYR3Q15413 4870 aa14.46□□□□□ -0.09
RTN4R-201ENST00000043402 Q75L30 129 aa14.41□□□□□ -0.1
RTN4R-201ENST00000043402 LINC01558Q9Y6Z2 57 aa14.4□□□□□ -0.1
RTN4R-201ENST00000043402 HSPG2P98160 4391 aa14.39□□□□□ -0.11
RTN4R-201ENST00000043402 IGKV2D-30A0A075B6S6 120 aa14.36□□□□□ -0.11
RTN4R-201ENST00000043402 A8MU10 97 aa14.33□□□□□ -0.11
RTN4R-201ENST00000043402 DMAC1Q96GE9 116 aa14.33□□□□□ -0.11
RTN4R-201ENST00000043402 LRP1Q07954 4544 aaKnown RBP14.32□□□□□ -0.12
RTN4R-201ENST00000043402 ACYP2P14621 99 aa14.32□□□□□ -0.12
RTN4R-201ENST00000043402 C9orf92A6NGG3 77 aa14.3□□□□□ -0.12
RTN4R-201ENST00000043402 A6NED7 52 aa14.29□□□□□ -0.12
RTN4R-201ENST00000043402 TNXBP22105 4242 aa14.28□□□□□ -0.12
RTN4R-201ENST00000043402 FLG2Q5D862 2391 aaPredicted RBP14.27□□□□□ -0.13
RTN4R-201ENST00000043402 RYR1P21817 5038 aa14.24□□□□□ -0.13
RTN4R-201ENST00000043402 Q5VSD8 79 aa14.23□□□□□ -0.13
RTN4R-201ENST00000043402 LCA10Q71F78 164 aa14.22□□□□□ -0.13
RTN4R-201ENST00000043402 Q8N1X5 172 aa14.21□□□□□ -0.13
RTN4R-201ENST00000043402 C20orf166-AS1Q96NR2 134 aa14.2□□□□□ -0.14
RTN4R-201ENST00000043402 A8MUU9 505 aa14.2□□□□□ -0.14
RTN4R-201ENST00000043402 FAT3Q8TDW7 4589 aa14.18□□□□□ -0.14
RTN4R-201ENST00000043402 KRTAP17-1Q9BYP8 105 aa14.16□□□□□ -0.14
RTN4R-201ENST00000043402 KRTAP10-8P60410 259 aa14.15□□□□□ -0.14
RTN4R-201ENST00000043402 C7orf65Q6ZTY9 151 aa14.15□□□□□ -0.14
RTN4R-201ENST00000043402 CDC42SE1Q9NRR8 79 aa14.13□□□□□ -0.15
RTN4R-201ENST00000043402 PMAIP1Q13794 54 aa14.12□□□□□ -0.15
RTN4R-201ENST00000043402 ATP11AUNQ6ZP68 121 aa14.1□□□□□ -0.15
RTN4R-201ENST00000043402 SPTSSBQ8NFR3 76 aa14.09□□□□□ -0.15
RTN4R-201ENST00000043402 SPINK7P58062 85 aa14.08□□□□□ -0.16
RTN4R-201ENST00000043402 KIAA1109Q2LD37 5005 aa14.08□□□□□ -0.16
RTN4R-201ENST00000043402 DMBT1Q9UGM3 2413 aaPredicted RBP13.96□□□□□ -0.18
RTN4R-201ENST00000043402 MYCBP2O75592 4640 aa13.94□□□□□ -0.18
RTN4R-201ENST00000043402 EPPK1P58107 5090 aaKnown RBP13.93□□□□□ -0.18
RTN4R-201ENST00000043402 A0A1B0GU69 56 aa13.9□□□□□ -0.18
RTN4R-201ENST00000043402 A6NN06 94 aa13.86□□□□□ -0.19
RTN4R-201ENST00000043402 MT1HL1P0DM35 61 aa13.83□□□□□ -0.2
RTN4R-201ENST00000043402 KRTAP3-1Q9BYR8 98 aa13.82□□□□□ -0.2
RTN4R-201ENST00000043402 KTN1-AS1Q86SY8 53 aa13.79□□□□□ -0.2
RTN4R-201ENST00000043402 XP32Q5T750 250 aa13.7□□□□□ -0.22
RTN4R-201ENST00000043402 RPL37P61927 97 aaKnown RBP13.69□□□□□ -0.22
RTN4R-201ENST00000043402 SPATA8Q6RVD6 105 aa13.66□□□□□ -0.22
RTN4R-201ENST00000043402 UQCR11O14957 56 aa13.64□□□□□ -0.23
RTN4R-201ENST00000043402 SEC61GP60059 68 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms