RNA–Protein interactions for RNA: ENST00000034275.12

RANBP3-201, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-201ENST00000034275 COX7CP15954 63 aa9.58□□□□□ -0.88
RANBP3-201ENST00000034275 J3KT08 172 aa9.57□□□□□ -0.88
RANBP3-201ENST00000034275 IGKV4-1P06312 121 aa9.56□□□□□ -0.88
RANBP3-201ENST00000034275 CXCL6P80162 114 aa9.54□□□□□ -0.88
RANBP3-201ENST00000034275 A0A087WVE0 104 aa9.53□□□□□ -0.88
RANBP3-201ENST00000034275 SERP2Q8N6R1 65 aa9.51□□□□□ -0.89
RANBP3-201ENST00000034275 RETNLBQ9BQ08 111 aa9.51□□□□□ -0.89
RANBP3-201ENST00000034275 PCLOQ9Y6V0 5065 aa9.5□□□□□ -0.89
RANBP3-201ENST00000034275 NDUFB1O75438 58 aa9.5□□□□□ -0.89
RANBP3-201ENST00000034275 DSCR10P59022 87 aa9.5□□□□□ -0.89
RANBP3-201ENST00000034275 A8MWP4 228 aa9.48□□□□□ -0.89
RANBP3-201ENST00000034275 Q8N9L7 120 aa9.45□□□□□ -0.9
RANBP3-201ENST00000034275 K7EQZ3 153 aa9.44□□□□□ -0.9
RANBP3-201ENST00000034275 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
RANBP3-201ENST00000034275 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
RANBP3-201ENST00000034275 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
RANBP3-201ENST00000034275 A0A1B0GVX0 72 aa9.42□□□□□ -0.9
RANBP3-201ENST00000034275 PRR4Q16378 134 aa9.4□□□□□ -0.91
RANBP3-201ENST00000034275 SMIM20Q8N5G0 67 aa9.4□□□□□ -0.91
RANBP3-201ENST00000034275 IGLV7-46A0A075B6I9 117 aa9.39□□□□□ -0.91
RANBP3-201ENST00000034275 LINC00313P59037 77 aa9.37□□□□□ -0.91
RANBP3-201ENST00000034275 TMEM258P61165 79 aa9.35□□□□□ -0.91
RANBP3-201ENST00000034275 TRAV7A0A075B6U4 112 aa9.35□□□□□ -0.91
RANBP3-201ENST00000034275 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
RANBP3-201ENST00000034275 C8orf17Q9NRJ1 99 aa9.34□□□□□ -0.91
RANBP3-201ENST00000034275 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
RANBP3-201ENST00000034275 HCG22E2RYF7 251 aa9.31□□□□□ -0.92
RANBP3-201ENST00000034275 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
RANBP3-201ENST00000034275 MMP24-AS1A0A0U1RRL7 71 aa9.29□□□□□ -0.92
RANBP3-201ENST00000034275 hDV103S1A0JD37 113 aa9.29□□□□□ -0.92
RANBP3-201ENST00000034275 CASC2Q6XLA1 102 aa9.29□□□□□ -0.92
RANBP3-201ENST00000034275 WFDC13Q8IUB5 93 aa9.29□□□□□ -0.92
RANBP3-201ENST00000034275 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
RANBP3-201ENST00000034275 RPS28P62857 69 aaKnown RBP9.27□□□□□ -0.92
RANBP3-201ENST00000034275 C20orf197Q8N268 126 aa9.27□□□□□ -0.92
RANBP3-201ENST00000034275 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
RANBP3-201ENST00000034275 TPRXLQ17RH7 258 aa9.24□□□□□ -0.93
RANBP3-201ENST00000034275 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
RANBP3-201ENST00000034275 MRPL34Q9BQ48 92 aaKnown RBP9.23□□□□□ -0.93
RANBP3-201ENST00000034275 KRTAP16-1A8MUX0 517 aa9.21□□□□□ -0.94
RANBP3-201ENST00000034275 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
RANBP3-201ENST00000034275 HERC1Q15751 4861 aa9.19□□□□□ -0.94
RANBP3-201ENST00000034275 NDUFS5O43920 106 aa9.17□□□□□ -0.94
RANBP3-201ENST00000034275 NDUFC1O43677 76 aa9.17□□□□□ -0.94
RANBP3-201ENST00000034275 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
RANBP3-201ENST00000034275 FAM236DA0A1B0GTK5 79 aa9.16□□□□□ -0.94
RANBP3-201ENST00000034275 FAM236CP0DP71 79 aa9.16□□□□□ -0.94
RANBP3-201ENST00000034275 XP32Q5T750 250 aa9.15□□□□□ -0.94
RANBP3-201ENST00000034275 H7BZZ5 65 aa9.14□□□□□ -0.95
RANBP3-201ENST00000034275 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
RANBP3-201ENST00000034275 SNURFQ9Y675 71 aa9.13□□□□□ -0.95
RANBP3-201ENST00000034275 A8MUU9 505 aa9.12□□□□□ -0.95
RANBP3-201ENST00000034275 Q75L30 129 aa9.11□□□□□ -0.95
RANBP3-201ENST00000034275 OCR1Q9BZK8 76 aa9.11□□□□□ -0.95
RANBP3-201ENST00000034275 TP53AIP1Q9HCN2 124 aa9.11□□□□□ -0.95
RANBP3-201ENST00000034275 SVIPQ8NHG7 77 aa9.1□□□□□ -0.95
RANBP3-201ENST00000034275 ATP5EP56381 51 aaPredicted RBP9.08□□□□□ -0.96
RANBP3-201ENST00000034275 LPAP08519 4548 aa9.07□□□□□ -0.96
RANBP3-201ENST00000034275 RPL37P61927 97 aaKnown RBP9.07□□□□□ -0.96
RANBP3-201ENST00000034275 SERP1Q9Y6X1 66 aa9.07□□□□□ -0.96
RANBP3-201ENST00000034275 ATP11AUNQ6ZP68 121 aa9.05□□□□□ -0.96
RANBP3-201ENST00000034275 A0A0U1RQV1 116 aa9.04□□□□□ -0.96
RANBP3-201ENST00000034275 ZCCHC13Q8WW36 166 aaKnown RBP9.01□□□□□ -0.97
RANBP3-201ENST00000034275 Q5W150 140 aa8.99□□□□□ -0.97
RANBP3-201ENST00000034275 HMCN2Q8NDA2 5059 aa8.99□□□□□ -0.97
RANBP3-201ENST00000034275 LRP2P98164 4655 aa8.99□□□□□ -0.97
RANBP3-201ENST00000034275 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
RANBP3-201ENST00000034275 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
RANBP3-201ENST00000034275 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.97
RANBP3-201ENST00000034275 PCOTHQ58A44 107 aa8.94□□□□□ -0.98
RANBP3-201ENST00000034275 H0Y9P7 68 aa8.94□□□□□ -0.98
RANBP3-201ENST00000034275 MP68P56378 58 aa8.94□□□□□ -0.98
RANBP3-201ENST00000034275 SMIM26A0A096LP01 95 aa8.91□□□□□ -0.98
RANBP3-201ENST00000034275 LINC00208Q96KT6 92 aa8.88□□□□□ -0.99
RANBP3-201ENST00000034275 H3BPC8 53 aa8.86□□□□□ -0.99
RANBP3-201ENST00000034275 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
RANBP3-201ENST00000034275 C4orf26Q17RF5 130 aa8.85□□□□□ -0.99
RANBP3-201ENST00000034275 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
RANBP3-201ENST00000034275 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -1
RANBP3-201ENST00000034275 IGKV2-30P06310 120 aa8.84□□□□□ -1
RANBP3-201ENST00000034275 SPINK7P58062 85 aa8.83□□□□□ -1
RANBP3-201ENST00000034275 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
RANBP3-201ENST00000034275 CYP4F30PQ9H0H9 118 aa8.8□□□□□ -1
RANBP3-201ENST00000034275 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
RANBP3-201ENST00000034275 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
RANBP3-201ENST00000034275 MUC17Q685J3 4493 aa8.68□□□□□ -1.02
RANBP3-201ENST00000034275 UBR4Q5T4S7 5183 aa8.68□□□□□ -1.02
RANBP3-201ENST00000034275 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
RANBP3-201ENST00000034275 HRES1P13985 223 aa8.64□□□□□ -1.03
RANBP3-201ENST00000034275 MUC2Q02817 5179 aa8.64□□□□□ -1.03
RANBP3-201ENST00000034275 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
RANBP3-201ENST00000034275 Q1T7F1 81 aa8.59□□□□□ -1.03
RANBP3-201ENST00000034275 PRO0628Q9UI54 55 aa8.56□□□□□ -1.04
RANBP3-201ENST00000034275 V9GYY9 64 aa8.56□□□□□ -1.04
RANBP3-201ENST00000034275 COX6B2Q6YFQ2 88 aa8.55□□□□□ -1.04
RANBP3-201ENST00000034275 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
RANBP3-201ENST00000034275 BRK1Q8WUW1 75 aa8.5□□□□□ -1.05
RANBP3-201ENST00000034275 A8MUN3 132 aa8.47□□□□□ -1.05
RANBP3-201ENST00000034275 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
RANBP3-201ENST00000034275 COA5Q86WW8 74 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms