RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Tnfsf15Q5UBV8 252 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Hist1h2bbQ64475 126 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Fam222aQ6PGH4 453 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Hist1h2bkQ8CGP1 126 aaKnown RBP6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Hist1h2bpQ8CGP2 126 aaKnown RBP6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr1228Q8VGM9 323 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Fxyd4Q9D2W0 88 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Acrv1P50289 261 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr1373Q7TQT6 311 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr435Q8VFS3 313 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tmprss5Q9ER04 455 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ceacam15A0A0B4J1L0 234 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Zfp979A2A799 407 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm21983D6RFS9 131 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm9767G3X930 207 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 LfngO09010 378 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Saa4P31532 130 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Znf664Q4VA44 261 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Lyzl1Q9CPX3 148 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 UrahQ9CRB3 118 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Fbxo25Q9D2Y6 357 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Q9D8L0 127 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 1700008P02RikQ9DAJ8 175 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Fbn1Q61554 2873 aaKnown RBP6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Igfn1Q3KNY0 2849 aa6.64□□□□□ -1.35
Trim39-201ENSMUST00000042717 Igkv4-57-1A0A075B5M4 119 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ighv1-15A0A0A6YXA5 117 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Trbv17A0A140T8P8 114 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm6970F7DCP6 221 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Rnase1P00683 149 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Slc35b1P97858 322 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Fbxl7Q5BJ29 491 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Slc17a2Q5SZA1 478 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Slc25a48Q8BW66 306 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ube2e2Q91W82 201 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tomm40Q9QYA2 361 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 CampP51437 172 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Slc35d2Q762D5 326 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr904Q7TRC9 310 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm10190Q8BSD7 107 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Dynlrb2Q9DAJ5 96 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm14214V9GX35 225 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Igkv4-59A0A0B4J1I8 117 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm3618D3Z4P5 127 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm10447Q3UQ92 135 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Fbln7Q501P1 440 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Trp53rkaQ5U452 244 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tmem91Q8C581 172 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tp53rkQ99PW4 244 aa6.63□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ighv12-3A0A075B5T1 117 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Psg18B2RSG7 476 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 KprpB2RUR4 657 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm8439G3UWA7 96 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Twist1P26687 206 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm10334Q792Y8 246 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm5105Q8C6Y9 112 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tnfrsf13cQ9D8D0 175 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tmem239Q9DA47 151 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Npc2Q9Z0J0 149 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Trav16A0A075B653 116 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm26661M0QWV4 156 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ang5Q5GAN1 145 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ifna11Q61716 190 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Cd99Q8VCN6 175 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Higd1bQ99JY6 98 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ufc1Q9CR09 167 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Dpm3Q9D1Q4 92 aa6.62□□□□□ -1.35
Trim39-201ENSMUST00000042717 Scgb1b12A0A087WP21 93 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr1245A0A1L1SQJ6 307 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr1320A2AHM8 319 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tm4sf19E9Q9H8 206 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Saa3P04918 122 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Pde6hP61249 83 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Smim6Q3U0I6 56 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 SnrpcQ62241 159 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 A130051J06RikQ8CAU1 227 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tctex1d4Q8CDY7 219 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Dazap1Q9JII5 406 aaKnown RBP6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ighv3-8A0A075B5T0 131 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Trdv1A0A075B657 112 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Fndc10A2A9Q0 223 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 TymsP07607 307 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ctdsp1P58466 261 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Hist2h2beQ64524 126 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Pygo2Q80V76 405 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr509Q8VF20 321 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Spcs1Q9D958 161 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 NipblQ6KCD5 2798 aaKnown RBP6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ighv1-52A0A0A6YXC3 117 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Igkv4-81A0A0G2JEY5 119 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Mettl23A2AA28 253 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ascl2O35885 263 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Rhox4eQ504P9 205 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ucn2Q99ML8 113 aa6.61□□□□□ -1.35
Trim39-201ENSMUST00000042717 Itpr2Q9Z329 2701 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Igkv20-101-2A0A0G2JDU3 113 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Vmn1r1E9PVR6 306 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr556E9Q549 324 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Edn1P22387 202 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Rpl19P84099 196 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 109.9 ms