RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 P01649 108 aa18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Klk13Q8CGR6 276 aa18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Lypd8Q9D7S0 255 aa18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 P01787 123 aa18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Q80X32 188 aaKnown RBP18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Slc25a48Q8BW66 306 aa18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 A0A286YE02 88 aa18.64■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Foxi1Q922I5 372 aa18.64■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 GlrxQ9QUH0 107 aa18.64■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ccl6P27784 116 aa18.64■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Dph3Q8K0W9 82 aa18.64■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Tnrc6aQ3UHK8 1896 aaKnown RBP18.64■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Ighv1-69A0A0G2JFS5 117 aa18.64■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Slc25a29Q8BL03 306 aa18.64■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 BC035044E0CXF8 138 aa18.63■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Shisa9Q9CZN4 424 aa18.63■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Srsf2Q62093 221 aaKnown RBP18.63■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 MsmbO08540 113 aa18.63■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 CrygbP04344 175 aa18.63■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Rnf166Q3U9F6 237 aa18.62■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Trav6n-6A0A075B6B2 114 aa18.62■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 GhrhP16043 103 aa18.62■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Ighv1-23A0A0A6YVW3 117 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Ralgapa1Q6GYP7 2035 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 OtofQ9ESF1 1997 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Trbv30A0A0B4J1P1 111 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Wisp3D3Z5L9 354 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Gm28038F7BCN9 126 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Ighv1-62-3P01754 117 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Rasl10aQ8K5A4 203 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Fam216aQ9DB54 251 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Ubl5Q9EPV8 73 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Igkv20-101-2A0A0G2JDU3 113 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Pear1Q8VIK5 1034 aa18.61■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Zfp36P22893 319 aaKnown RBP18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Zic4Q61467 341 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Igkv4-63A0A0G2JFU6 117 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 P04219 140 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Gm4763Q8CFJ5 196 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Gm5129F6YHA9 99 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Wfdc9Q3UW41 83 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Fer1l5P0DM40 2038 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Ighv1-19A0A0A6YWX0 117 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 A0A1L1SR50 188 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 BB014433Q8C5R5 389 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Mcm3apQ9WUU9 1971 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Ly6g5bQ8K1T4 194 aa18.6■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Trav2Q5R1I9 109 aa18.59■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Igkv4-62A0A0G2JDW9 117 aa18.59■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Plxna3P70208 1872 aa18.59■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Rnf138Q9CQE0 245 aaKnown RBP18.59■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Rnf144bQ8BKD6 301 aa18.58■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 Gm19684G3UZ45 117 aa18.58■□□□□ 0.57
Sh3rf1-201ENSMUST00000034060 KprpB2RUR4 657 aa18.58■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Map1bP14873 2464 aaKnown RBP18.58■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Lage3Q9CR70 148 aa18.58■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Urb1Q571H0 2274 aaKnown RBP18.58■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Clec4b2Q67DU8 208 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 PpbpQ9EQI5 113 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Igkv12-89A0A0G2JGW8 112 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Zfp36l1P23950 338 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Msrb3Q8BU85 253 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Dpm3Q9D1Q4 92 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Trav6-6A0A075B603 114 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Csrp1P97315 193 aaKnown RBP18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Ociad2Q9D8W7 154 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Gm12830F6XVH0 157 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Igkv1-99F6XWB2 120 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 H2-DMb1P35737 261 aa18.57■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Ighv3-8A0A075B5T0 131 aa18.56■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Stpg1Q9D2F5 341 aa18.56■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Igkv4-57-1A0A075B5M4 119 aa18.56■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Trav9d-1A0A075B699 112 aa18.56■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Gtsf1Q9DAN6 167 aa18.56■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 P01792 123 aa18.56■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Mpv17l2Q8VIK2 200 aa18.56■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Atp6v0e1Q9CQD8 81 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Ifitm1Q9D103 106 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Bcorl1A2AQH4 1781 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Cox11Q6P8I6 275 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Rnf183Q8QZS5 190 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 1700084M14RikB1AT01 78 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Tmem14cQ9CQN6 114 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Wdr81Q5ND34 1934 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Trav14d-1A0A075B6B1 121 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 P01680 129 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 ElaneQ3UP87 265 aa18.55■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 A530064D06RikQ8BNV8 229 aa18.54■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Foxf1Q61080 378 aa18.54■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Ighv1-16A0A075B5U1 98 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Shisal2aA2A9G7 189 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Colca2F8VPY8 239 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 P01741 114 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Gm10384Q3UQ87 92 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Gm26558Q8BLW8 286 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 P01896 185 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Cox7cP17665 63 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Ighv1-55A0A075B5W6 117 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Inafm2A0A1L1STD6 152 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Gm7075D3Z497 112 aa18.53■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 115.3 ms