RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 LOC110117498A0A087WWA1 95 aa10.68□□□□□ -0.7
PHGDH-232ENST00000641947 ZNF861PO60384 105 aa10.68□□□□□ -0.7
PHGDH-232ENST00000641947 IGLV7-43P04211 117 aa10.68□□□□□ -0.7
PHGDH-232ENST00000641947 FAM240AA0A1B0GVK7 77 aa10.67□□□□□ -0.7
PHGDH-232ENST00000641947 CCKP06307 115 aa10.67□□□□□ -0.7
PHGDH-232ENST00000641947 XGP55808 180 aa10.67□□□□□ -0.7
PHGDH-232ENST00000641947 FAT1Q14517 4588 aa10.66□□□□□ -0.7
PHGDH-232ENST00000641947 SPRR1BP22528 89 aa10.66□□□□□ -0.7
PHGDH-232ENST00000641947 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
PHGDH-232ENST00000641947 SPRR4Q96PI1 79 aa10.64□□□□□ -0.71
PHGDH-232ENST00000641947 ACYP1P07311 99 aa10.6□□□□□ -0.71
PHGDH-232ENST00000641947 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
PHGDH-232ENST00000641947 A0A0G2JQZ4 141 aa10.6□□□□□ -0.71
PHGDH-232ENST00000641947 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
PHGDH-232ENST00000641947 EPPK1P58107 5090 aaKnown RBP10.58□□□□□ -0.72
PHGDH-232ENST00000641947 PDE6GP18545 87 aa10.57□□□□□ -0.72
PHGDH-232ENST00000641947 ANAPC11Q9NYG5 84 aa10.57□□□□□ -0.72
PHGDH-232ENST00000641947 HSPG2P98160 4391 aa10.57□□□□□ -0.72
PHGDH-232ENST00000641947 IGLV8-61A0A075B6I0 122 aa10.57□□□□□ -0.72
PHGDH-232ENST00000641947 SCGB1A1P11684 91 aa10.57□□□□□ -0.72
PHGDH-232ENST00000641947 F8WEM9 126 aa10.56□□□□□ -0.72
PHGDH-232ENST00000641947 SMR3BP02814 79 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-232ENST00000641947 RYR1P21817 5038 aa10.55□□□□□ -0.72
PHGDH-232ENST00000641947 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
PHGDH-232ENST00000641947 IGFL1Q6UW32 110 aa10.55□□□□□ -0.72
PHGDH-232ENST00000641947 ZNF706Q9Y5V0 76 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-232ENST00000641947 MT-ATP8P03928 68 aa10.54□□□□□ -0.72
PHGDH-232ENST00000641947 PKHD1L1Q86WI1 4243 aa10.52□□□□□ -0.73
PHGDH-232ENST00000641947 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
PHGDH-232ENST00000641947 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
PHGDH-232ENST00000641947 Q8NBF4 154 aa10.5□□□□□ -0.73
PHGDH-232ENST00000641947 SIGMAR1Q99720 223 aa10.49□□□□□ -0.73
PHGDH-232ENST00000641947 KRTAP10-4P60372 401 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-232ENST00000641947 C9orf153Q5TBE3 101 aa10.46□□□□□ -0.74
PHGDH-232ENST00000641947 LINC00643Q86TS7 51 aa10.45□□□□□ -0.74
PHGDH-232ENST00000641947 KRTAP1-4P0C5Y4 121 aa10.44□□□□□ -0.74
PHGDH-232ENST00000641947 MOBPQ13875 183 aa10.44□□□□□ -0.74
PHGDH-232ENST00000641947 Q6JHZ5 121 aa10.44□□□□□ -0.74
PHGDH-232ENST00000641947 Q6ZVQ6 151 aa10.44□□□□□ -0.74
PHGDH-232ENST00000641947 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
PHGDH-232ENST00000641947 CRYGAP11844 174 aa10.43□□□□□ -0.74
PHGDH-232ENST00000641947 A0A087X002 238 aa10.42□□□□□ -0.74
PHGDH-232ENST00000641947 UBL5Q9BZL1 73 aa10.42□□□□□ -0.74
PHGDH-232ENST00000641947 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
PHGDH-232ENST00000641947 KRTAP13-2Q52LG2 175 aa10.39□□□□□ -0.75
PHGDH-232ENST00000641947 Q6Q795 121 aa10.38□□□□□ -0.75
PHGDH-232ENST00000641947 SPINK6Q6UWN8 80 aa10.38□□□□□ -0.75
PHGDH-232ENST00000641947 A0A1B0GW54 56 aa10.37□□□□□ -0.75
PHGDH-232ENST00000641947 A0A087WSZ3 146 aa10.37□□□□□ -0.75
PHGDH-232ENST00000641947 CDK2AP2O75956 126 aa10.37□□□□□ -0.75
PHGDH-232ENST00000641947 KRTAP17-1Q9BYP8 105 aa10.37□□□□□ -0.75
PHGDH-232ENST00000641947 TRBV7-7A0A0K0K1E9 115 aa10.36□□□□□ -0.75
PHGDH-232ENST00000641947 FAM229BQ4G0N7 80 aa10.35□□□□□ -0.75
PHGDH-232ENST00000641947 NREPQ16612 68 aa10.34□□□□□ -0.75
PHGDH-232ENST00000641947 HRCT1Q6UXD1 115 aa10.34□□□□□ -0.75
PHGDH-232ENST00000641947 PLA2G1BP04054 148 aaKnown RBP10.3□□□□□ -0.76
PHGDH-232ENST00000641947 ATP5EP2Q5VTU8 51 aa10.3□□□□□ -0.76
PHGDH-232ENST00000641947 SSBP3-AS1Q7Z2R9 100 aa10.28□□□□□ -0.76
PHGDH-232ENST00000641947 CXCL6P80162 114 aa10.27□□□□□ -0.77
PHGDH-232ENST00000641947 Q5VSD8 79 aa10.27□□□□□ -0.77
PHGDH-232ENST00000641947 A0A087WVE0 104 aa10.26□□□□□ -0.77
PHGDH-232ENST00000641947 IMUPQ9GZP8 106 aa10.26□□□□□ -0.77
PHGDH-232ENST00000641947 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
PHGDH-232ENST00000641947 FAM229AH3BQW9 127 aa10.25□□□□□ -0.77
PHGDH-232ENST00000641947 DEFB116Q30KQ4 102 aa10.25□□□□□ -0.77
PHGDH-232ENST00000641947 BPY2O14599 106 aa10.24□□□□□ -0.77
PHGDH-232ENST00000641947 Q8N9L7 120 aa10.24□□□□□ -0.77
PHGDH-232ENST00000641947 PRR26Q8N8Z3 221 aa10.24□□□□□ -0.77
PHGDH-232ENST00000641947 FAT3Q8TDW7 4589 aa10.24□□□□□ -0.77
PHGDH-232ENST00000641947 HIST1H4AP62805 103 aaKnown RBP10.23□□□□□ -0.77
PHGDH-232ENST00000641947 LINC00472Q9H8W2 130 aa10.23□□□□□ -0.77
PHGDH-232ENST00000641947 DSCR10P59022 87 aa10.22□□□□□ -0.77
PHGDH-232ENST00000641947 Q96NJ1 140 aa10.21□□□□□ -0.77
PHGDH-232ENST00000641947 TNXBP22105 4242 aa10.21□□□□□ -0.77
PHGDH-232ENST00000641947 CD164Q04900 197 aa10.21□□□□□ -0.78
PHGDH-232ENST00000641947 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
PHGDH-232ENST00000641947 TYMSOSQ8TAI1 123 aa10.19□□□□□ -0.78
PHGDH-232ENST00000641947 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
PHGDH-232ENST00000641947 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
PHGDH-232ENST00000641947 K7EQZ3 153 aa10.16□□□□□ -0.78
PHGDH-232ENST00000641947 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.78
PHGDH-232ENST00000641947 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.78
PHGDH-232ENST00000641947 MYCBP2O75592 4640 aa10.15□□□□□ -0.79
PHGDH-232ENST00000641947 Q8N1X5 172 aa10.14□□□□□ -0.79
PHGDH-232ENST00000641947 LINC00304Q8N9R0 145 aa10.09□□□□□ -0.79
PHGDH-232ENST00000641947 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-232ENST00000641947 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
PHGDH-232ENST00000641947 Q5XG85 94 aa10.08□□□□□ -0.8
PHGDH-232ENST00000641947 A8MWP4 228 aa10.07□□□□□ -0.8
PHGDH-232ENST00000641947 J3KT08 172 aa10.06□□□□□ -0.8
PHGDH-232ENST00000641947 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
PHGDH-232ENST00000641947 SPINK1P00995 79 aa10.04□□□□□ -0.8
PHGDH-232ENST00000641947 C4orf48Q5BLP8 95 aa10.04□□□□□ -0.8
PHGDH-232ENST00000641947 PRR15Q8IV56 129 aa10.04□□□□□ -0.8
PHGDH-232ENST00000641947 HERC2O95714 4834 aa10.04□□□□□ -0.8
PHGDH-232ENST00000641947 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
PHGDH-232ENST00000641947 KRTAP4-5Q9BYR2 181 aa10.03□□□□□ -0.8
PHGDH-232ENST00000641947 ABCA13Q86UQ4 5058 aa10.02□□□□□ -0.8
PHGDH-232ENST00000641947 LIMD2Q9BT23 127 aa10.01□□□□□ -0.81
PHGDH-232ENST00000641947 KRTAP10-8P60410 259 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms