RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 LINC01547P58512 204 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-221ENST00000641573 C1orf137Q5JT78 98 aa8.05□□□□□ -1.12
PHGDH-221ENST00000641573 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
PHGDH-221ENST00000641573 OBSCN-AS1Q96MR7 158 aa8.05□□□□□ -1.12
PHGDH-221ENST00000641573 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
PHGDH-221ENST00000641573 J3QR89 54 aa8.04□□□□□ -1.12
PHGDH-221ENST00000641573 Q8N377 158 aa8.04□□□□□ -1.12
PHGDH-221ENST00000641573 LAMTOR3Q9UHA4 124 aa8.04□□□□□ -1.12
PHGDH-221ENST00000641573 IGLV5-48A0A075B6I7 105 aa8.03□□□□□ -1.12
PHGDH-221ENST00000641573 A0A1B0GV72 72 aa8.03□□□□□ -1.12
PHGDH-221ENST00000641573 JMJD7-PLA2G4BH0Y9G9 81 aa8.03□□□□□ -1.12
PHGDH-221ENST00000641573 NDUFV3P56181 108 aaKnown RBP8.02□□□□□ -1.13
PHGDH-221ENST00000641573 C14orf132Q9NPU4 83 aa8.01□□□□□ -1.13
PHGDH-221ENST00000641573 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
PHGDH-221ENST00000641573 ZNF861PO60384 105 aa7.99□□□□□ -1.13
PHGDH-221ENST00000641573 IGLV7-43P04211 117 aa7.99□□□□□ -1.13
PHGDH-221ENST00000641573 RBM3P98179 157 aaKnown RBP7.99□□□□□ -1.13
PHGDH-221ENST00000641573 HMCN2Q8NDA2 5059 aa7.98□□□□□ -1.13
PHGDH-221ENST00000641573 C3orf22Q8N5N4 141 aa7.97□□□□□ -1.13
PHGDH-221ENST00000641573 PLA2G1BP04054 148 aaKnown RBP7.96□□□□□ -1.14
PHGDH-221ENST00000641573 SPRR1BP22528 89 aa7.96□□□□□ -1.14
PHGDH-221ENST00000641573 GAGE2AQ6NT46 116 aa7.96□□□□□ -1.14
PHGDH-221ENST00000641573 SMIM29Q86T20 159 aa7.96□□□□□ -1.14
PHGDH-221ENST00000641573 DSCR8Q96T75 97 aa7.95□□□□□ -1.14
PHGDH-221ENST00000641573 LOC110117498A0A087WWA1 95 aa7.94□□□□□ -1.14
PHGDH-221ENST00000641573 SPRR4Q96PI1 79 aa7.94□□□□□ -1.14
PHGDH-221ENST00000641573 ZNF706Q9Y5V0 76 aaPredicted RBP7.94□□□□□ -1.14
PHGDH-221ENST00000641573 CCKP06307 115 aa7.93□□□□□ -1.14
PHGDH-221ENST00000641573 Q6ZQT0 140 aa7.93□□□□□ -1.14
PHGDH-221ENST00000641573 TRBV7-4A0A0J9YYF1 115 aa7.92□□□□□ -1.14
PHGDH-221ENST00000641573 FAM240AA0A1B0GVK7 77 aa7.92□□□□□ -1.14
PHGDH-221ENST00000641573 F8WEM9 126 aa7.92□□□□□ -1.14
PHGDH-221ENST00000641573 PDE6GP18545 87 aa7.92□□□□□ -1.14
PHGDH-221ENST00000641573 LCE2DQ5TA82 110 aaPredicted RBP7.92□□□□□ -1.14
PHGDH-221ENST00000641573 ACYP1P07311 99 aa7.91□□□□□ -1.14
PHGDH-221ENST00000641573 LINC00483Q53H64 154 aa7.9□□□□□ -1.14
PHGDH-221ENST00000641573 RPL37AP61513 92 aaKnown RBP7.89□□□□□ -1.15
PHGDH-221ENST00000641573 VPS25Q9BRG1 176 aa7.89□□□□□ -1.15
PHGDH-221ENST00000641573 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
PHGDH-221ENST00000641573 IGLV8-61A0A075B6I0 122 aa7.87□□□□□ -1.15
PHGDH-221ENST00000641573 C21orf62-AS1Q17RA5 79 aa7.87□□□□□ -1.15
PHGDH-221ENST00000641573 OXTP01178 125 aa7.86□□□□□ -1.15
PHGDH-221ENST00000641573 PKHD1L1Q86WI1 4243 aa7.86□□□□□ -1.15
PHGDH-221ENST00000641573 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
PHGDH-221ENST00000641573 IGFL1Q6UW32 110 aa7.84□□□□□ -1.15
PHGDH-221ENST00000641573 LINC00846Q9NV44 126 aa7.84□□□□□ -1.15
PHGDH-221ENST00000641573 IGLV9-49A0A0B4J1Y8 123 aa7.83□□□□□ -1.16
PHGDH-221ENST00000641573 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
PHGDH-221ENST00000641573 Q6JHZ5 121 aa7.83□□□□□ -1.16
PHGDH-221ENST00000641573 A0A0G2JQZ4 141 aa7.82□□□□□ -1.16
PHGDH-221ENST00000641573 C9orf153Q5TBE3 101 aa7.82□□□□□ -1.16
PHGDH-221ENST00000641573 Q8NBF4 154 aa7.82□□□□□ -1.16
PHGDH-221ENST00000641573 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-221ENST00000641573 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
PHGDH-221ENST00000641573 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
PHGDH-221ENST00000641573 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
PHGDH-221ENST00000641573 MOBPQ13875 183 aa7.78□□□□□ -1.16
PHGDH-221ENST00000641573 A0A1B0GW54 56 aa7.77□□□□□ -1.17
PHGDH-221ENST00000641573 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
PHGDH-221ENST00000641573 LINC00643Q86TS7 51 aa7.77□□□□□ -1.17
PHGDH-221ENST00000641573 SIGMAR1Q99720 223 aa7.77□□□□□ -1.17
PHGDH-221ENST00000641573 UBL5Q9BZL1 73 aa7.77□□□□□ -1.17
PHGDH-221ENST00000641573 MT-ATP8P03928 68 aa7.76□□□□□ -1.17
PHGDH-221ENST00000641573 CRYGAP11844 174 aa7.76□□□□□ -1.17
PHGDH-221ENST00000641573 KRTAP1-4P0C5Y4 121 aa7.75□□□□□ -1.17
PHGDH-221ENST00000641573 Q6ZVQ6 151 aa7.75□□□□□ -1.17
PHGDH-221ENST00000641573 FAT3Q8TDW7 4589 aa7.75□□□□□ -1.17
PHGDH-221ENST00000641573 Q6Q795 121 aa7.74□□□□□ -1.17
PHGDH-221ENST00000641573 A0A087X002 238 aa7.73□□□□□ -1.17
PHGDH-221ENST00000641573 NREPQ16612 68 aa7.72□□□□□ -1.17
PHGDH-221ENST00000641573 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
PHGDH-221ENST00000641573 SSBP3-AS1Q7Z2R9 100 aa7.72□□□□□ -1.17
PHGDH-221ENST00000641573 A0A087WSZ3 146 aa7.71□□□□□ -1.18
PHGDH-221ENST00000641573 IGKV3D-7A0A0C4DH55 119 aa7.7□□□□□ -1.18
PHGDH-221ENST00000641573 TRBV7-7A0A0K0K1E9 115 aa7.7□□□□□ -1.18
PHGDH-221ENST00000641573 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
PHGDH-221ENST00000641573 ATP5EP2Q5VTU8 51 aa7.68□□□□□ -1.18
PHGDH-221ENST00000641573 LRP2P98164 4655 aa7.67□□□□□ -1.18
PHGDH-221ENST00000641573 CD164Q04900 197 aa7.65□□□□□ -1.18
PHGDH-221ENST00000641573 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.18
PHGDH-221ENST00000641573 BPY2O14599 106 aa7.64□□□□□ -1.19
PHGDH-221ENST00000641573 CXCL6P80162 114 aa7.64□□□□□ -1.19
PHGDH-221ENST00000641573 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
PHGDH-221ENST00000641573 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
PHGDH-221ENST00000641573 SS18L2Q9UHA2 77 aa7.62□□□□□ -1.19
PHGDH-221ENST00000641573 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
PHGDH-221ENST00000641573 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
PHGDH-221ENST00000641573 LINC00472Q9H8W2 130 aa7.6□□□□□ -1.19
PHGDH-221ENST00000641573 DEFB116Q30KQ4 102 aa7.59□□□□□ -1.19
PHGDH-221ENST00000641573 TNXBP22105 4242 aa7.58□□□□□ -1.2
PHGDH-221ENST00000641573 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
PHGDH-221ENST00000641573 SCGB1A1P11684 91 aa7.57□□□□□ -1.2
PHGDH-221ENST00000641573 DSCR10P59022 87 aa7.57□□□□□ -1.2
PHGDH-221ENST00000641573 A0A087WVE0 104 aa7.56□□□□□ -1.2
PHGDH-221ENST00000641573 Q8N9L7 120 aa7.56□□□□□ -1.2
PHGDH-221ENST00000641573 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
PHGDH-221ENST00000641573 Q96NJ1 140 aa7.56□□□□□ -1.2
PHGDH-221ENST00000641573 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
PHGDH-221ENST00000641573 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
PHGDH-221ENST00000641573 J3KT08 172 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms