RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 DNAH17Q9UFH2 4485 aa10.3□□□□□ -0.76
PHGDH-216ENST00000641375 FAM19A1Q7Z5A9 133 aa10.3□□□□□ -0.76
PHGDH-216ENST00000641375 FUSP35637 526 aaKnown RBP eCLIP10.29□□□□□ -0.76
PHGDH-216ENST00000641375 TRAV7A0A075B6U4 112 aa10.29□□□□□ -0.76
PHGDH-216ENST00000641375 PDE6GP18545 87 aa10.29□□□□□ -0.76
PHGDH-216ENST00000641375 LOC110117498A0A087WWA1 95 aa10.28□□□□□ -0.76
PHGDH-216ENST00000641375 KLKP1Q107X0 134 aa10.28□□□□□ -0.76
PHGDH-216ENST00000641375 FRAS1Q86XX4 4008 aa10.27□□□□□ -0.76
PHGDH-216ENST00000641375 H0Y9J4 135 aa10.27□□□□□ -0.77
PHGDH-216ENST00000641375 DEFB105AQ8NG35 78 aa10.27□□□□□ -0.77
PHGDH-216ENST00000641375 IGLV5-48A0A075B6I7 105 aa10.26□□□□□ -0.77
PHGDH-216ENST00000641375 Q8N377 158 aa10.26□□□□□ -0.77
PHGDH-216ENST00000641375 LINC01547P58512 204 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-216ENST00000641375 PRLHP81277 87 aa10.26□□□□□ -0.77
PHGDH-216ENST00000641375 Q6ZQT0 140 aa10.26□□□□□ -0.77
PHGDH-216ENST00000641375 KRTAP11-1Q8IUC1 163 aa10.26□□□□□ -0.77
PHGDH-216ENST00000641375 ERC2-IT1O76042 136 aa10.25□□□□□ -0.77
PHGDH-216ENST00000641375 FP248Q71RG6 208 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-216ENST00000641375 PLAC8Q9NZF1 115 aa10.24□□□□□ -0.77
PHGDH-216ENST00000641375 ATP5EP56381 51 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-216ENST00000641375 TRBV7-4A0A0J9YYF1 115 aa10.23□□□□□ -0.77
PHGDH-216ENST00000641375 ST20-AS1Q8NBB2 130 aa10.23□□□□□ -0.77
PHGDH-216ENST00000641375 UBL5Q9BZL1 73 aa10.23□□□□□ -0.77
PHGDH-216ENST00000641375 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
PHGDH-216ENST00000641375 NDUFC1O43677 76 aa10.21□□□□□ -0.77
PHGDH-216ENST00000641375 UBE2AP49459 152 aa10.21□□□□□ -0.77
PHGDH-216ENST00000641375 HYDINQ4G0P3 5121 aa10.21□□□□□ -0.77
PHGDH-216ENST00000641375 KRTAP10-2P60368 255 aa10.2□□□□□ -0.78
PHGDH-216ENST00000641375 V9GYY9 64 aa10.2□□□□□ -0.78
PHGDH-216ENST00000641375 SEC61GP60059 68 aa10.19□□□□□ -0.78
PHGDH-216ENST00000641375 C1orf195Q5TG92 126 aa10.18□□□□□ -0.78
PHGDH-216ENST00000641375 LCE6AA0A183 80 aa10.16□□□□□ -0.78
PHGDH-216ENST00000641375 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
PHGDH-216ENST00000641375 F8WEM9 126 aa10.15□□□□□ -0.79
PHGDH-216ENST00000641375 FAT2Q9NYQ8 4349 aa10.14□□□□□ -0.79
PHGDH-216ENST00000641375 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
PHGDH-216ENST00000641375 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
PHGDH-216ENST00000641375 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
PHGDH-216ENST00000641375 BRK1Q8WUW1 75 aa10.12□□□□□ -0.79
PHGDH-216ENST00000641375 PKD1P98161 4303 aa10.11□□□□□ -0.79
PHGDH-216ENST00000641375 SPRR1BP22528 89 aa10.11□□□□□ -0.79
PHGDH-216ENST00000641375 SNURFQ9Y675 71 aa10.11□□□□□ -0.79
PHGDH-216ENST00000641375 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
PHGDH-216ENST00000641375 DNAH5Q8TE73 4624 aa10.1□□□□□ -0.79
PHGDH-216ENST00000641375 SACSQ9NZJ4 4579 aa10.1□□□□□ -0.79
PHGDH-216ENST00000641375 DNAH8Q96JB1 4490 aa10.09□□□□□ -0.79
PHGDH-216ENST00000641375 CXCL6P80162 114 aa10.09□□□□□ -0.79
PHGDH-216ENST00000641375 Q6ZSA8 131 aa10.09□□□□□ -0.79
PHGDH-216ENST00000641375 FAM30AQ9NZY2 134 aa10.09□□□□□ -0.79
PHGDH-216ENST00000641375 A0A1B0GW54 56 aa10.08□□□□□ -0.8
PHGDH-216ENST00000641375 CIRBP-AS1Q8TBR5 109 aa10.08□□□□□ -0.8
PHGDH-216ENST00000641375 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
PHGDH-216ENST00000641375 SRRM2Q9UQ35 2752 aaKnown RBP10.06□□□□□ -0.8
PHGDH-216ENST00000641375 IGLV8-61A0A075B6I0 122 aa10.06□□□□□ -0.8
PHGDH-216ENST00000641375 ZNF861PO60384 105 aa10.05□□□□□ -0.8
PHGDH-216ENST00000641375 SCXQ7RTU7 201 aa10.05□□□□□ -0.8
PHGDH-216ENST00000641375 A0A0U1RQV1 116 aa10.04□□□□□ -0.8
PHGDH-216ENST00000641375 Q6ZVQ6 151 aa10.04□□□□□ -0.8
PHGDH-216ENST00000641375 ZNF706Q9Y5V0 76 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-216ENST00000641375 Q8NBF4 154 aa10.04□□□□□ -0.8
PHGDH-216ENST00000641375 A0A1W2PNM2 257 aa10.02□□□□□ -0.8
PHGDH-216ENST00000641375 HAMPP81172 84 aa10.02□□□□□ -0.81
PHGDH-216ENST00000641375 SPRR4Q96PI1 79 aa10.01□□□□□ -0.81
PHGDH-216ENST00000641375 IGFL1Q6UW32 110 aa10.01□□□□□ -0.81
PHGDH-216ENST00000641375 IGLV7-43P04211 117 aa10□□□□□ -0.81
PHGDH-216ENST00000641375 LINC00483Q53H64 154 aa9.99□□□□□ -0.81
PHGDH-216ENST00000641375 NREPQ16612 68 aa9.98□□□□□ -0.81
PHGDH-216ENST00000641375 TMEM254Q8TBM7 123 aa9.98□□□□□ -0.81
PHGDH-216ENST00000641375 FAM229BQ4G0N7 80 aa9.96□□□□□ -0.82
PHGDH-216ENST00000641375 PRR15Q8IV56 129 aa9.96□□□□□ -0.82
PHGDH-216ENST00000641375 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
PHGDH-216ENST00000641375 A0A0G2JQZ4 141 aa9.92□□□□□ -0.82
PHGDH-216ENST00000641375 A0A1B0GVY2 172 aa9.92□□□□□ -0.82
PHGDH-216ENST00000641375 RPL37AP61513 92 aaKnown RBP9.92□□□□□ -0.82
PHGDH-216ENST00000641375 BPY2O14599 106 aa9.91□□□□□ -0.82
PHGDH-216ENST00000641375 PKHD1P08F94 4074 aa9.91□□□□□ -0.82
PHGDH-216ENST00000641375 PMAIP1Q13794 54 aa9.91□□□□□ -0.82
PHGDH-216ENST00000641375 IGLV9-49A0A0B4J1Y8 123 aa9.9□□□□□ -0.82
PHGDH-216ENST00000641375 RYR2Q92736 4967 aa9.88□□□□□ -0.83
PHGDH-216ENST00000641375 A0A087WSZ3 146 aa9.87□□□□□ -0.83
PHGDH-216ENST00000641375 OCR1Q9BZK8 76 aa9.86□□□□□ -0.83
PHGDH-216ENST00000641375 KMT2CQ8NEZ4 4911 aaKnown RBP9.85□□□□□ -0.83
PHGDH-216ENST00000641375 LRP1BQ9NZR2 4599 aa9.85□□□□□ -0.83
PHGDH-216ENST00000641375 Q1T7F1 81 aa9.84□□□□□ -0.83
PHGDH-216ENST00000641375 ANAPC11Q9NYG5 84 aa9.84□□□□□ -0.83
PHGDH-216ENST00000641375 MOBPQ13875 183 aa9.83□□□□□ -0.84
PHGDH-216ENST00000641375 hDV103S1A0JD37 113 aa9.82□□□□□ -0.84
PHGDH-216ENST00000641375 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
PHGDH-216ENST00000641375 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
PHGDH-216ENST00000641375 CD164Q04900 197 aa9.77□□□□□ -0.85
PHGDH-216ENST00000641375 Q8N9L7 120 aa9.77□□□□□ -0.85
PHGDH-216ENST00000641375 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
PHGDH-216ENST00000641375 DSCR10P59022 87 aa9.75□□□□□ -0.85
PHGDH-216ENST00000641375 DYNC1H1Q14204 4646 aaKnown RBP9.74□□□□□ -0.85
PHGDH-216ENST00000641375 LINC00472Q9H8W2 130 aa9.73□□□□□ -0.85
PHGDH-216ENST00000641375 DEFB116Q30KQ4 102 aa9.71□□□□□ -0.85
PHGDH-216ENST00000641375 SPINK6Q6UWN8 80 aa9.71□□□□□ -0.85
PHGDH-216ENST00000641375 K7EQZ3 153 aa9.7□□□□□ -0.86
PHGDH-216ENST00000641375 C1orf64Q8NEQ6 169 aa9.7□□□□□ -0.86
PHGDH-216ENST00000641375 A0A087X002 238 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms