RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 MYO5CQ9NQX4 1742 aa-0.1□□□□□ -2.43
ATM-228ENST00000639240 AKAP13Q12802 2813 aa-0.1□□□□□ -2.43
ATM-228ENST00000639240 ZC3H13Q5T200 1668 aaKnown RBP-0.11□□□□□ -2.43
ATM-228ENST00000639240 NHSQ6T4R5 1651 aa-0.11□□□□□ -2.43
ATM-228ENST00000639240 PDE4DIPQ5VU43 2346 aa-0.11□□□□□ -2.43
ATM-228ENST00000639240 SPRR2AP35326 72 aa-0.12□□□□□ -2.43
ATM-228ENST00000639240 LMTK2Q8IWU2 1503 aa-0.13□□□□□ -2.43
ATM-228ENST00000639240 IQGAP3Q86VI3 1631 aa-0.13□□□□□ -2.43
ATM-228ENST00000639240 INO80Q9ULG1 1556 aaPredicted RBP-0.13□□□□□ -2.43
ATM-228ENST00000639240 RALGAPBQ86X10 1494 aa-0.13□□□□□ -2.43
ATM-228ENST00000639240 LYNX1G3V0Z9 82 aa-0.13□□□□□ -2.43
ATM-228ENST00000639240 HFM1A2PYH4 1435 aa-0.13□□□□□ -2.43
ATM-228ENST00000639240 DEFB131BA0A096LNP1 70 aa-0.14□□□□□ -2.43
ATM-228ENST00000639240 H0YAA0 97 aa-0.14□□□□□ -2.43
ATM-228ENST00000639240 LINC00158P58513 81 aa-0.14□□□□□ -2.43
ATM-228ENST00000639240 CREBBPQ92793 2442 aa-0.14□□□□□ -2.43
ATM-228ENST00000639240 NBASA2RRP1 2371 aa-0.14□□□□□ -2.43
ATM-228ENST00000639240 NRAPQ86VF7 1730 aa-0.15□□□□□ -2.43
ATM-228ENST00000639240 STAB2Q8WWQ8 2551 aa-0.15□□□□□ -2.43
ATM-228ENST00000639240 PDZD2O15018 2839 aa-0.15□□□□□ -2.43
ATM-228ENST00000639240 H0YGG7 62 aa-0.15□□□□□ -2.43
ATM-228ENST00000639240 KCNQ1DNQ9H478 68 aa-0.15□□□□□ -2.43
ATM-228ENST00000639240 PRRC2CQ9Y520 2896 aaKnown RBP-0.15□□□□□ -2.43
ATM-228ENST00000639240 BPTFQ12830 3046 aa-0.15□□□□□ -2.43
ATM-228ENST00000639240 TNRC18O15417 2968 aaPredicted RBP-0.15□□□□□ -2.43
ATM-228ENST00000639240 SETD2Q9BYW2 2564 aaPredicted RBP-0.16□□□□□ -2.43
ATM-228ENST00000639240 UGGT2Q9NYU1 1516 aa-0.16□□□□□ -2.43
ATM-228ENST00000639240 MRPL33O75394 65 aaKnown RBP-0.16□□□□□ -2.44
ATM-228ENST00000639240 HECTD1Q9ULT8 2610 aa-0.16□□□□□ -2.44
ATM-228ENST00000639240 CDC42BPGQ6DT37 1551 aa-0.16□□□□□ -2.44
ATM-228ENST00000639240 PCLOQ9Y6V0 5065 aa-0.16□□□□□ -2.44
ATM-228ENST00000639240 LRP1BQ9NZR2 4599 aa-0.16□□□□□ -2.44
ATM-228ENST00000639240 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
ATM-228ENST00000639240 DSPP15924 2871 aaKnown RBP-0.17□□□□□ -2.44
ATM-228ENST00000639240 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
ATM-228ENST00000639240 SVEP1Q4LDE5 3571 aa-0.17□□□□□ -2.44
ATM-228ENST00000639240 PKHD1P08F94 4074 aa-0.18□□□□□ -2.44
ATM-228ENST00000639240 FLGP20930 4061 aaPredicted RBP-0.18□□□□□ -2.44
ATM-228ENST00000639240 KMT2CQ8NEZ4 4911 aaKnown RBP-0.18□□□□□ -2.44
ATM-228ENST00000639240 UBL5Q9BZL1 73 aa-0.18□□□□□ -2.44
ATM-228ENST00000639240 SPTBN4Q9H254 2564 aa-0.18□□□□□ -2.44
ATM-228ENST00000639240 KIAA0586Q9BVV6 1533 aa-0.18□□□□□ -2.44
ATM-228ENST00000639240 NBEAL1Q6ZS30 2694 aa-0.19□□□□□ -2.44
ATM-228ENST00000639240 ABCA9Q8IUA7 1624 aa-0.19□□□□□ -2.44
ATM-228ENST00000639240 ZZEF1O43149 2961 aa-0.19□□□□□ -2.44
ATM-228ENST00000639240 KRTAP6-2Q3LI66 62 aa-0.19□□□□□ -2.44
ATM-228ENST00000639240 C3P01024 1663 aa-0.19□□□□□ -2.44
ATM-228ENST00000639240 DUOX2Q9NRD8 1548 aa-0.2□□□□□ -2.44
ATM-228ENST00000639240 DIP2AQ14689 1571 aa-0.2□□□□□ -2.44
ATM-228ENST00000639240 NF1P21359 2839 aa-0.2□□□□□ -2.44
ATM-228ENST00000639240 ITSN2Q9NZM3 1697 aa-0.21□□□□□ -2.44
ATM-228ENST00000639240 PKD1P98161 4303 aa-0.21□□□□□ -2.44
ATM-228ENST00000639240 SPRR2EP22531 72 aa-0.21□□□□□ -2.44
ATM-228ENST00000639240 TGP01266 2768 aa-0.21□□□□□ -2.44
ATM-228ENST00000639240 HTTP42858 3142 aa-0.22□□□□□ -2.44
ATM-228ENST00000639240 ASXL1Q8IXJ9 1541 aa-0.22□□□□□ -2.44
ATM-228ENST00000639240 IAPPP10997 89 aa-0.22□□□□□ -2.44
ATM-228ENST00000639240 SMCO4Q9NRQ5 59 aa-0.22□□□□□ -2.44
ATM-228ENST00000639240 SONP18583 2426 aaKnown RBP-0.23□□□□□ -2.45
ATM-228ENST00000639240 H3BVH4 76 aa-0.23□□□□□ -2.45
ATM-228ENST00000639240 PDCD5O14737 125 aa-0.23□□□□□ -2.45
ATM-228ENST00000639240 DEFB130BP0DP73 79 aa-0.23□□□□□ -2.45
ATM-228ENST00000639240 DEFB130AP0DP74 79 aa-0.23□□□□□ -2.45
ATM-228ENST00000639240 DEFB114Q30KQ6 69 aa-0.23□□□□□ -2.45
ATM-228ENST00000639240 ENHOQ6UWT2 76 aa-0.23□□□□□ -2.45
ATM-228ENST00000639240 LYSTQ99698 3801 aa-0.24□□□□□ -2.45
ATM-228ENST00000639240 C9orf92A6NGG3 77 aa-0.24□□□□□ -2.45
ATM-228ENST00000639240 PRLHP81277 87 aa-0.24□□□□□ -2.45
ATM-228ENST00000639240 DEFA5Q01523 94 aa-0.24□□□□□ -2.45
ATM-228ENST00000639240 ATXN8Q156A1 80 aa-0.24□□□□□ -2.45
ATM-228ENST00000639240 MROH1Q8NDA8 1641 aa-0.24□□□□□ -2.45
ATM-228ENST00000639240 SPG11Q96JI7 2443 aa-0.25□□□□□ -2.45
ATM-228ENST00000639240 TEP1Q99973 2627 aaKnown RBP-0.26□□□□□ -2.45
ATM-228ENST00000639240 ANKRD36CQ5JPF3 1778 aa-0.26□□□□□ -2.45
ATM-228ENST00000639240 ETDCA0A1B0GVM5 59 aa-0.26□□□□□ -2.45
ATM-228ENST00000639240 CRIP1P50238 77 aa-0.26□□□□□ -2.45
ATM-228ENST00000639240 KRTAP19-7Q3SYF9 63 aa-0.26□□□□□ -2.45
ATM-228ENST00000639240 CUBNO60494 3623 aa-0.26□□□□□ -2.45
ATM-228ENST00000639240 CEP290O15078 2479 aa-0.26□□□□□ -2.45
ATM-228ENST00000639240 RYR1P21817 5038 aa-0.27□□□□□ -2.45
ATM-228ENST00000639240 KIF1AQ12756 1690 aa-0.27□□□□□ -2.45
ATM-228ENST00000639240 MT1AP04731 61 aa-0.27□□□□□ -2.45
ATM-228ENST00000639240 EPG5Q9HCE0 2579 aa-0.27□□□□□ -2.45
ATM-228ENST00000639240 EFCAB5A4FU69 1503 aa-0.28□□□□□ -2.45
ATM-228ENST00000639240 RNF213Q63HN8 5207 aa-0.28□□□□□ -2.45
ATM-228ENST00000639240 MXRA5Q9NR99 2828 aa-0.28□□□□□ -2.45
ATM-228ENST00000639240 ANKRD11Q6UB99 2663 aaPredicted RBP-0.28□□□□□ -2.45
ATM-228ENST00000639240 DMXL1Q9Y485 3027 aa-0.28□□□□□ -2.45
ATM-228ENST00000639240 MADDQ8WXG6 1647 aa-0.28□□□□□ -2.45
ATM-228ENST00000639240 HIVEP1P15822 2718 aa-0.29□□□□□ -2.46
ATM-228ENST00000639240 H3BNG1 76 aa-0.29□□□□□ -2.46
ATM-228ENST00000639240 HILPDAQ9Y5L2 63 aa-0.29□□□□□ -2.46
ATM-228ENST00000639240 RYR3Q15413 4870 aa-0.29□□□□□ -2.46
ATM-228ENST00000639240 GCN1Q92616 2671 aaKnown RBP-0.3□□□□□ -2.46
ATM-228ENST00000639240 CCDC180Q9P1Z9 1646 aa-0.3□□□□□ -2.46
ATM-228ENST00000639240 DNMBPQ6XZF7 1577 aa-0.3□□□□□ -2.46
ATM-228ENST00000639240 SPRR2FQ96RM1 72 aa-0.3□□□□□ -2.46
ATM-228ENST00000639240 S4R3F8 94 aa-0.3□□□□□ -2.46
ATM-228ENST00000639240 VPS13BQ7Z7G8 4022 aa-0.3□□□□□ -2.46
ATM-228ENST00000639240 ABCC6O95255 1503 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms