RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 COX7BP24311 80 aa4.73□□□□□ -1.65
PNKP-229ENST00000637897 MUC2Q02817 5179 aa4.72□□□□□ -1.65
PNKP-229ENST00000637897 IGLV7-43P04211 117 aa4.72□□□□□ -1.65
PNKP-229ENST00000637897 ACYP1P07311 99 aa4.72□□□□□ -1.65
PNKP-229ENST00000637897 ELOF1P60002 83 aaKnown RBP4.72□□□□□ -1.65
PNKP-229ENST00000637897 C1orf137Q5JT78 98 aa4.72□□□□□ -1.65
PNKP-229ENST00000637897 FAM19A5Q7Z5A7 132 aaPredicted RBP4.72□□□□□ -1.65
PNKP-229ENST00000637897 FAT4Q6V0I7 4981 aa4.71□□□□□ -1.65
PNKP-229ENST00000637897 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.66
PNKP-229ENST00000637897 PRR26Q8N8Z3 221 aa4.71□□□□□ -1.66
PNKP-229ENST00000637897 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.66
PNKP-229ENST00000637897 SIGMAR1Q99720 223 aa4.71□□□□□ -1.66
PNKP-229ENST00000637897 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
PNKP-229ENST00000637897 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
PNKP-229ENST00000637897 PRYO14603 147 aa4.7□□□□□ -1.66
PNKP-229ENST00000637897 REG3GQ6UW15 175 aa4.7□□□□□ -1.66
PNKP-229ENST00000637897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.7□□□□□ -1.66
PNKP-229ENST00000637897 CDIP1Q9H305 208 aa4.7□□□□□ -1.66
PNKP-229ENST00000637897 IGLV1-50A0A075B6I6 118 aa4.69□□□□□ -1.66
PNKP-229ENST00000637897 MRPL55Q7Z7F7 128 aaKnown RBP4.69□□□□□ -1.66
PNKP-229ENST00000637897 H0Y9J4 135 aa4.68□□□□□ -1.66
PNKP-229ENST00000637897 Q6ZQY7 126 aa4.68□□□□□ -1.66
PNKP-229ENST00000637897 SPRR1AP35321 89 aa4.67□□□□□ -1.66
PNKP-229ENST00000637897 DHRS4-AS1Q9P1J3 65 aa4.67□□□□□ -1.66
PNKP-229ENST00000637897 ETDCA0A1B0GVM5 59 aa4.66□□□□□ -1.66
PNKP-229ENST00000637897 RPL37AP8A6NKH3 93 aa4.66□□□□□ -1.66
PNKP-229ENST00000637897 SCGB1A1P11684 91 aa4.66□□□□□ -1.66
PNKP-229ENST00000637897 PDE6GP18545 87 aa4.66□□□□□ -1.66
PNKP-229ENST00000637897 GAGE2AQ6NT46 116 aa4.66□□□□□ -1.66
PNKP-229ENST00000637897 Q6ZRX8 168 aa4.66□□□□□ -1.66
PNKP-229ENST00000637897 C14orf132Q9NPU4 83 aa4.66□□□□□ -1.66
PNKP-229ENST00000637897 B5MCH6 92 aa4.65□□□□□ -1.67
PNKP-229ENST00000637897 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
PNKP-229ENST00000637897 CCKP06307 115 aa4.65□□□□□ -1.67
PNKP-229ENST00000637897 RBM3P98179 157 aaKnown RBP4.65□□□□□ -1.67
PNKP-229ENST00000637897 LAMTOR3Q9UHA4 124 aa4.65□□□□□ -1.67
PNKP-229ENST00000637897 LOC110117498A0A087WWA1 95 aa4.64□□□□□ -1.67
PNKP-229ENST00000637897 A0A087X002 238 aa4.64□□□□□ -1.67
PNKP-229ENST00000637897 MT-ATP8P03928 68 aa4.64□□□□□ -1.67
PNKP-229ENST00000637897 KRTAP13-1Q8IUC0 172 aa4.64□□□□□ -1.67
PNKP-229ENST00000637897 ZNF861PO60384 105 aa4.63□□□□□ -1.67
PNKP-229ENST00000637897 NDUFV3P56181 108 aaKnown RBP4.63□□□□□ -1.67
PNKP-229ENST00000637897 LINC00643Q86TS7 51 aa4.63□□□□□ -1.67
PNKP-229ENST00000637897 DSCR8Q96T75 97 aa4.63□□□□□ -1.67
PNKP-229ENST00000637897 PCP4P48539 62 aa4.62□□□□□ -1.67
PNKP-229ENST00000637897 UBE2BP63146 152 aa4.62□□□□□ -1.67
PNKP-229ENST00000637897 Q6Q795 121 aa4.62□□□□□ -1.67
PNKP-229ENST00000637897 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
PNKP-229ENST00000637897 KRTAP13-2Q52LG2 175 aa4.61□□□□□ -1.67
PNKP-229ENST00000637897 Q6ZQT0 140 aa4.61□□□□□ -1.67
PNKP-229ENST00000637897 Q9BRP9 147 aa4.61□□□□□ -1.67
PNKP-229ENST00000637897 MUC17Q685J3 4493 aa4.61□□□□□ -1.67
PNKP-229ENST00000637897 A0A1B0GV72 72 aa4.6□□□□□ -1.67
PNKP-229ENST00000637897 IMUPQ9GZP8 106 aa4.6□□□□□ -1.67
PNKP-229ENST00000637897 IGLV5-48A0A075B6I7 105 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 TRBV7-4A0A0J9YYF1 115 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 BCE1O60756 84 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 FAM19A1Q7Z5A9 133 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 Q8N377 158 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 SMCR5Q8TEV8 140 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 LINC00846Q9NV44 126 aa4.59□□□□□ -1.67
PNKP-229ENST00000637897 Q6JHZ5 121 aa4.58□□□□□ -1.68
PNKP-229ENST00000637897 DEFB105AQ8NG35 78 aa4.58□□□□□ -1.68
PNKP-229ENST00000637897 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
PNKP-229ENST00000637897 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
PNKP-229ENST00000637897 ATP5EP2Q5VTU8 51 aa4.57□□□□□ -1.68
PNKP-229ENST00000637897 A0A1B0GW54 56 aa4.56□□□□□ -1.68
PNKP-229ENST00000637897 ERC2-IT1O76042 136 aa4.56□□□□□ -1.68
PNKP-229ENST00000637897 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
PNKP-229ENST00000637897 UBE2AP49459 152 aa4.55□□□□□ -1.68
PNKP-229ENST00000637897 PRLHP81277 87 aa4.55□□□□□ -1.68
PNKP-229ENST00000637897 ST20-AS1Q8NBB2 130 aa4.55□□□□□ -1.68
PNKP-229ENST00000637897 HIGD2AQ9BW72 106 aa4.55□□□□□ -1.68
PNKP-229ENST00000637897 F8WEM9 126 aa4.54□□□□□ -1.68
PNKP-229ENST00000637897 SPRR1BP22528 89 aa4.53□□□□□ -1.68
PNKP-229ENST00000637897 PRR4Q16378 134 aa4.53□□□□□ -1.68
PNKP-229ENST00000637897 CRYGAP11844 174 aa4.52□□□□□ -1.69
PNKP-229ENST00000637897 Q6ZVQ6 151 aa4.52□□□□□ -1.69
PNKP-229ENST00000637897 C3orf22Q8N5N4 141 aa4.52□□□□□ -1.69
PNKP-229ENST00000637897 RETNLBQ9BQ08 111 aa4.52□□□□□ -1.69
PNKP-229ENST00000637897 IGLV8-61A0A075B6I0 122 aa4.51□□□□□ -1.69
PNKP-229ENST00000637897 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
PNKP-229ENST00000637897 CXCL6P80162 114 aa4.51□□□□□ -1.69
PNKP-229ENST00000637897 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
PNKP-229ENST00000637897 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
PNKP-229ENST00000637897 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
PNKP-229ENST00000637897 ANAPC13Q9BS18 74 aa4.51□□□□□ -1.69
PNKP-229ENST00000637897 FAM229BQ4G0N7 80 aa4.5□□□□□ -1.69
PNKP-229ENST00000637897 Q8NBF4 154 aa4.5□□□□□ -1.69
PNKP-229ENST00000637897 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
PNKP-229ENST00000637897 FAM236AA0A1B0GUQ0 79 aa4.49□□□□□ -1.69
PNKP-229ENST00000637897 FAM236BA0A1B0GV22 79 aa4.49□□□□□ -1.69
PNKP-229ENST00000637897 NREPQ16612 68 aa4.49□□□□□ -1.69
PNKP-229ENST00000637897 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
PNKP-229ENST00000637897 A0A1W2PNM2 257 aa4.48□□□□□ -1.69
PNKP-229ENST00000637897 HIST1H4AP62805 103 aaKnown RBP4.48□□□□□ -1.69
PNKP-229ENST00000637897 IGFL1Q6UW32 110 aa4.47□□□□□ -1.69
PNKP-229ENST00000637897 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms