RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	ZNF462	Q96JM2	2506 aa		0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	ANKRD36C	Q5JPF3	1778 aa		0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	SNRPG	P62308	76 aa	Known RBP	0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	KLK9	Q2XQG4	91 aa		0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	DEFB106A	Q8N104	65 aa		0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	SMR3A	Q99954	134 aa		0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	TPR	P12270	2363 aa	Known RBP	0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	TJP1	Q07157	1748 aa		0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	PKDREJ	Q9NTG1	2253 aa		0.43	□□□□□ -2.34
MECP2-222	ENST00000637533	CACNA1H	O95180	2353 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	KIF21B	O75037	1637 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	PLCE1	Q9P212	2302 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	WFDC10B	Q8IUB3	73 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533		S4R3F8	94 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	PIEZO1	Q92508	2521 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	ZNF292	O60281	2723 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	POLQ	O75417	2590 aa		0.42	□□□□□ -2.34
MECP2-222	ENST00000637533	CELSR2	Q9HCU4	2923 aa		0.41	□□□□□ -2.34
MECP2-222	ENST00000637533	CDC42BPA	Q5VT25	1732 aa		0.41	□□□□□ -2.34
MECP2-222	ENST00000637533	BDP1	A6H8Y1	2624 aa		0.41	□□□□□ -2.34
MECP2-222	ENST00000637533	LMO7	Q8WWI1	1683 aa		0.41	□□□□□ -2.34
MECP2-222	ENST00000637533	TNP1	P09430	55 aa		0.41	□□□□□ -2.34
MECP2-222	ENST00000637533	SPTBN1	Q01082	2364 aa	Known RBP	0.41	□□□□□ -2.34
MECP2-222	ENST00000637533	USF3	Q68DE3	2245 aa		0.41	□□□□□ -2.34
MECP2-222	ENST00000637533	KAAG1	Q9UBP8	84 aa		0.4	□□□□□ -2.35
MECP2-222	ENST00000637533	AKAP6	Q13023	2319 aa		0.39	□□□□□ -2.35
MECP2-222	ENST00000637533	APC	P25054	2843 aa		0.39	□□□□□ -2.35
MECP2-222	ENST00000637533	TRANK1	O15050	2925 aa		0.39	□□□□□ -2.35
MECP2-222	ENST00000637533	CLTCL1	P53675	1640 aa		0.39	□□□□□ -2.35
MECP2-222	ENST00000637533	DUOX1	Q9NRD9	1551 aa		0.39	□□□□□ -2.35
MECP2-222	ENST00000637533	NFAT5	O94916	1531 aa		0.38	□□□□□ -2.35
MECP2-222	ENST00000637533	DDX60	Q8IY21	1712 aa	Known RBP	0.38	□□□□□ -2.35
MECP2-222	ENST00000637533	ABCA2	Q9BZC7	2435 aa		0.38	□□□□□ -2.35
MECP2-222	ENST00000637533	UNC79	Q9P2D8	2635 aa		0.38	□□□□□ -2.35
MECP2-222	ENST00000637533	SPTA1	P02549	2419 aa		0.38	□□□□□ -2.35
MECP2-222	ENST00000637533	F8	P00451	2351 aa		0.37	□□□□□ -2.35
MECP2-222	ENST00000637533	SPRR2B	P35325	72 aa		0.37	□□□□□ -2.35
MECP2-222	ENST00000637533	KRTAP19-3	Q7Z4W3	81 aa		0.37	□□□□□ -2.35
MECP2-222	ENST00000637533	TOGARAM1	Q9Y4F4	1720 aa		0.37	□□□□□ -2.35
MECP2-222	ENST00000637533	HIVEP3	Q5T1R4	2406 aa		0.37	□□□□□ -2.35
MECP2-222	ENST00000637533	TENM1	Q9UKZ4	2725 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	EP300	Q09472	2414 aa	Predicted RBP	0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	PDE4DIP	Q5VU43	2346 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.36	□□□□□ -2.35
MECP2-222	ENST00000637533		H3BNG1	76 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	KRTAP2-3	P0C7H8	128 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	LELP1	Q5T871	98 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	LINC01590	Q5TEZ4	76 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	CLPSL2	Q6UWE3	100 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	KRTAP2-4	Q9BYR9	128 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	KRTAP2-1	Q9BYU5	128 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	CREBBP	Q92793	2442 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	FBN3	Q75N90	2809 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	NOTCH1	P46531	2555 aa		0.36	□□□□□ -2.35
MECP2-222	ENST00000637533	IQGAP1	P46940	1657 aa		0.35	□□□□□ -2.35
MECP2-222	ENST00000637533	SPRR2D	P22532	72 aa		0.35	□□□□□ -2.35
MECP2-222	ENST00000637533	POLR2K	P53803	58 aa	Known RBP	0.35	□□□□□ -2.35
MECP2-222	ENST00000637533	CHD8	Q9HCK8	2581 aa		0.35	□□□□□ -2.35
MECP2-222	ENST00000637533	ZFYVE26	Q68DK2	2539 aa		0.34	□□□□□ -2.35
MECP2-222	ENST00000637533	SPART-AS1	P0CW21	52 aa		0.34	□□□□□ -2.36
MECP2-222	ENST00000637533	KRTAP5-7	Q6L8G8	165 aa		0.34	□□□□□ -2.36
MECP2-222	ENST00000637533	HECTD1	Q9ULT8	2610 aa		0.34	□□□□□ -2.36
MECP2-222	ENST00000637533	VWF	P04275	2813 aa		0.34	□□□□□ -2.36
MECP2-222	ENST00000637533	GVINP1	Q7Z2Y8	2422 aa		0.34	□□□□□ -2.36
MECP2-222	ENST00000637533	CSPG4	Q6UVK1	2322 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	PCNX1	Q96RV3	2341 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	MUC19	Q7Z5P9	8384 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	ATR	Q13535	2644 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	SPRR2A	P35326	72 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	TFF3	Q07654	80 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	CRCT1	Q9UGL9	99 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	OTOG	Q6ZRI0	2925 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	AHNAK2	Q8IVF2	5795 aa		0.33	□□□□□ -2.36
MECP2-222	ENST00000637533	MROH2B	Q7Z745	1585 aa		0.32	□□□□□ -2.36
MECP2-222	ENST00000637533	PRRC2C	Q9Y520	2896 aa	Known RBP	0.32	□□□□□ -2.36
MECP2-222	ENST00000637533	FRAS1	Q86XX4	4008 aa		0.32	□□□□□ -2.36
MECP2-222	ENST00000637533	FBN2	P35556	2912 aa		0.32	□□□□□ -2.36
MECP2-222	ENST00000637533	WNK1	Q9H4A3	2382 aa		0.32	□□□□□ -2.36
MECP2-222	ENST00000637533	DEFB110	Q30KQ9	67 aa		0.32	□□□□□ -2.36
MECP2-222	ENST00000637533	GCC2	Q8IWJ2	1684 aa		0.32	□□□□□ -2.36
MECP2-222	ENST00000637533	DSP	P15924	2871 aa	Known RBP	0.31	□□□□□ -2.36
MECP2-222	ENST00000637533	PKD1L1	Q8TDX9	2849 aa		0.31	□□□□□ -2.36
MECP2-222	ENST00000637533	IGSF10	Q6WRI0	2623 aa		0.31	□□□□□ -2.36
MECP2-222	ENST00000637533	TOMM7	Q9P0U1	55 aa		0.31	□□□□□ -2.36
MECP2-222	ENST00000637533	CHD6	Q8TD26	2715 aa		0.31	□□□□□ -2.36
MECP2-222	ENST00000637533	MACF1	Q9UPN3	7388 aa	Known RBP	0.31	□□□□□ -2.36
MECP2-222	ENST00000637533	SETX	Q7Z333	2677 aa	Known RBP	0.31	□□□□□ -2.36
MECP2-222	ENST00000637533	NCOR1	O75376	2440 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	NCOR2	Q9Y618	2525 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	SYNE2	Q8WXH0	6885 aa	Known RBP	0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	ANK2	Q01484	3957 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533		H3BUX3	64 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	PKD1L2	Q7Z442	2459 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	AKAP13	Q12802	2813 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	REV3L	O60673	3130 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	APC2	O95996	2303 aa		0.3	□□□□□ -2.36
MECP2-222	ENST00000637533	KNL1	Q8NG31	2342 aa		0.29	□□□□□ -2.36
MECP2-222	ENST00000637533	MT1A	P04731	61 aa		0.29	□□□□□ -2.36
MECP2-222	ENST00000637533	RHPN1-AS1	Q9BWJ2	59 aa		0.29	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms