RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 LAMTOR3Q9UHA4 124 aa9.37□□□□□ -0.91
CLN6-216ENST00000636876 MOBPQ13875 183 aa9.36□□□□□ -0.91
CLN6-216ENST00000636876 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
CLN6-216ENST00000636876 OCIAD2Q56VL3 154 aa9.35□□□□□ -0.91
CLN6-216ENST00000636876 TAX1BP3O14907 124 aa9.34□□□□□ -0.91
CLN6-216ENST00000636876 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
CLN6-216ENST00000636876 PPDPFLQ8WWR9 84 aa9.34□□□□□ -0.91
CLN6-216ENST00000636876 LST1O00453 97 aa9.33□□□□□ -0.92
CLN6-216ENST00000636876 DNAL4O96015 105 aa9.33□□□□□ -0.92
CLN6-216ENST00000636876 SSBP3-AS1Q7Z2R9 100 aa9.33□□□□□ -0.92
CLN6-216ENST00000636876 Q8NBF4 154 aa9.33□□□□□ -0.92
CLN6-216ENST00000636876 C9orf118A6NHY6 69 aa9.32□□□□□ -0.92
CLN6-216ENST00000636876 H3BUT2 72 aa9.32□□□□□ -0.92
CLN6-216ENST00000636876 LINC00304Q8N9R0 145 aa9.32□□□□□ -0.92
CLN6-216ENST00000636876 TRACP01848 142 aa9.31□□□□□ -0.92
CLN6-216ENST00000636876 COL5A1-AS1Q5SY13 56 aa9.31□□□□□ -0.92
CLN6-216ENST00000636876 LYRM7Q5U5X0 104 aa9.31□□□□□ -0.92
CLN6-216ENST00000636876 GHRHP01286 108 aa9.29□□□□□ -0.92
CLN6-216ENST00000636876 F8WEM9 126 aa9.28□□□□□ -0.92
CLN6-216ENST00000636876 TCL1BO95988 128 aa9.28□□□□□ -0.92
CLN6-216ENST00000636876 ORMDL1Q9P0S3 153 aa9.28□□□□□ -0.92
CLN6-216ENST00000636876 H3BQ85 93 aa9.27□□□□□ -0.93
CLN6-216ENST00000636876 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
CLN6-216ENST00000636876 SPAG11AQ6PDA7 123 aa9.27□□□□□ -0.93
CLN6-216ENST00000636876 A0A1W2PPM0 123 aa9.26□□□□□ -0.93
CLN6-216ENST00000636876 FABP2P12104 132 aa9.26□□□□□ -0.93
CLN6-216ENST00000636876 C4orf48Q5BLP8 95 aa9.26□□□□□ -0.93
CLN6-216ENST00000636876 TRBV20-1A0A075B6N2 111 aa9.25□□□□□ -0.93
CLN6-216ENST00000636876 IGLV8-61A0A075B6I0 122 aa9.24□□□□□ -0.93
CLN6-216ENST00000636876 NDUFV3P56181 108 aaKnown RBP9.24□□□□□ -0.93
CLN6-216ENST00000636876 TMEM256-PLSCR3K7ERE1 68 aa9.22□□□□□ -0.93
CLN6-216ENST00000636876 SPINK1P00995 79 aa9.21□□□□□ -0.94
CLN6-216ENST00000636876 Q6JHZ5 121 aa9.21□□□□□ -0.94
CLN6-216ENST00000636876 A0A0G2JQZ4 141 aa9.2□□□□□ -0.94
CLN6-216ENST00000636876 BAALC-AS2P0C853 105 aa9.19□□□□□ -0.94
CLN6-216ENST00000636876 UBE2V1Q13404 147 aa9.19□□□□□ -0.94
CLN6-216ENST00000636876 H3BMG7 143 aa9.18□□□□□ -0.94
CLN6-216ENST00000636876 CD164Q04900 197 aa9.18□□□□□ -0.94
CLN6-216ENST00000636876 IGFL1Q6UW32 110 aa9.18□□□□□ -0.94
CLN6-216ENST00000636876 RPS29P62273 56 aaKnown RBP9.17□□□□□ -0.94
CLN6-216ENST00000636876 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
CLN6-216ENST00000636876 SPCS1Q9Y6A9 102 aa9.17□□□□□ -0.94
CLN6-216ENST00000636876 C9JAW5 83 aa9.16□□□□□ -0.94
CLN6-216ENST00000636876 ANKRD29Q8N6D5 301 aa9.15□□□□□ -0.94
CLN6-216ENST00000636876 LRP2P98164 4655 aa9.13□□□□□ -0.95
CLN6-216ENST00000636876 A0A1B0GV72 72 aa9.13□□□□□ -0.95
CLN6-216ENST00000636876 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
CLN6-216ENST00000636876 K7EP34 96 aa9.1□□□□□ -0.95
CLN6-216ENST00000636876 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
CLN6-216ENST00000636876 H3BT86 120 aa9.09□□□□□ -0.95
CLN6-216ENST00000636876 MTURNQ8N3F0 131 aa9.09□□□□□ -0.95
CLN6-216ENST00000636876 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
CLN6-216ENST00000636876 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
CLN6-216ENST00000636876 PRR4Q16378 134 aa9.08□□□□□ -0.96
CLN6-216ENST00000636876 Q5XG85 94 aa9.08□□□□□ -0.96
CLN6-216ENST00000636876 Q6Q795 121 aa9.08□□□□□ -0.96
CLN6-216ENST00000636876 TEN1Q86WV5 123 aa9.07□□□□□ -0.96
CLN6-216ENST00000636876 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
CLN6-216ENST00000636876 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
CLN6-216ENST00000636876 A0A1W2PNM2 257 aa9.05□□□□□ -0.96
CLN6-216ENST00000636876 JMJD7-PLA2G4BH0Y9G9 81 aa9.05□□□□□ -0.96
CLN6-216ENST00000636876 GTF2H5Q6ZYL4 71 aa9.04□□□□□ -0.96
CLN6-216ENST00000636876 DSCR8Q96T75 97 aa9.04□□□□□ -0.96
CLN6-216ENST00000636876 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
CLN6-216ENST00000636876 OBSCN-AS1Q96MR7 158 aa9.03□□□□□ -0.96
CLN6-216ENST00000636876 CCKP06307 115 aa9.02□□□□□ -0.97
CLN6-216ENST00000636876 PRO0461Q9UI25 63 aa9.02□□□□□ -0.97
CLN6-216ENST00000636876 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
CLN6-216ENST00000636876 IGLV7-46A0A075B6I9 117 aa9□□□□□ -0.97
CLN6-216ENST00000636876 ASB16-AS1Q495Z4 193 aa9□□□□□ -0.97
CLN6-216ENST00000636876 A0A087WSZ3 146 aa8.99□□□□□ -0.97
CLN6-216ENST00000636876 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
CLN6-216ENST00000636876 C1orf195Q5TG92 126 aa8.99□□□□□ -0.97
CLN6-216ENST00000636876 SS18L2Q9UHA2 77 aa8.99□□□□□ -0.97
CLN6-216ENST00000636876 Q6ZQT0 140 aa8.98□□□□□ -0.97
CLN6-216ENST00000636876 C14orf132Q9NPU4 83 aa8.98□□□□□ -0.97
CLN6-216ENST00000636876 PDE6GP18545 87 aa8.97□□□□□ -0.97
CLN6-216ENST00000636876 VPS25Q9BRG1 176 aa8.97□□□□□ -0.97
CLN6-216ENST00000636876 F8W1H4 67 aa8.93□□□□□ -0.98
CLN6-216ENST00000636876 LPAP08519 4548 aa8.93□□□□□ -0.98
CLN6-216ENST00000636876 C21orf62-AS1Q17RA5 79 aa8.92□□□□□ -0.98
CLN6-216ENST00000636876 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
CLN6-216ENST00000636876 A0A1B0GV90 55 aa8.9□□□□□ -0.98
CLN6-216ENST00000636876 A0A1B0GW54 56 aa8.89□□□□□ -0.99
CLN6-216ENST00000636876 KRTAP13-3Q3SY46 172 aa8.89□□□□□ -0.99
CLN6-216ENST00000636876 Q96NJ1 140 aa8.88□□□□□ -0.99
CLN6-216ENST00000636876 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
CLN6-216ENST00000636876 LINC00472Q9H8W2 130 aa8.84□□□□□ -0.99
CLN6-216ENST00000636876 CDIP1Q9H305 208 aa8.83□□□□□ -1
CLN6-216ENST00000636876 C9orf92A6NGG3 77 aa8.8□□□□□ -1
CLN6-216ENST00000636876 IGKV4-1P06312 121 aa8.8□□□□□ -1
CLN6-216ENST00000636876 DEFB116Q30KQ4 102 aa8.8□□□□□ -1
CLN6-216ENST00000636876 SIGMAR1Q99720 223 aa8.8□□□□□ -1
CLN6-216ENST00000636876 NREPQ16612 68 aa8.77□□□□□ -1.01
CLN6-216ENST00000636876 J3KT08 172 aa8.76□□□□□ -1.01
CLN6-216ENST00000636876 XP32Q5T750 250 aa8.75□□□□□ -1.01
CLN6-216ENST00000636876 Q6ZVQ6 151 aa8.7□□□□□ -1.02
CLN6-216ENST00000636876 LINC00846Q9NV44 126 aa8.7□□□□□ -1.02
CLN6-216ENST00000636876 A0A1B0GVX0 72 aa8.69□□□□□ -1.02
CLN6-216ENST00000636876 IGHV6-1A0A0B4J1U7 121 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms