RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
CLN6-212ENST00000636020 M0R143 59 aa9.49□□□□□ -0.89
CLN6-212ENST00000636020 NCR3O14931 201 aa9.49□□□□□ -0.89
CLN6-212ENST00000636020 NPC2P61916 151 aa9.49□□□□□ -0.89
CLN6-212ENST00000636020 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
CLN6-212ENST00000636020 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
CLN6-212ENST00000636020 Q6Q795 121 aa9.48□□□□□ -0.89
CLN6-212ENST00000636020 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
CLN6-212ENST00000636020 COPS9Q8WXC6 57 aa9.47□□□□□ -0.89
CLN6-212ENST00000636020 A4D1N5 150 aa9.45□□□□□ -0.9
CLN6-212ENST00000636020 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
CLN6-212ENST00000636020 TMEM238LA0A1B0GVL6 79 aa9.44□□□□□ -0.9
CLN6-212ENST00000636020 A6NJY4 79 aa9.44□□□□□ -0.9
CLN6-212ENST00000636020 BATFQ16520 125 aa9.44□□□□□ -0.9
CLN6-212ENST00000636020 A0A1B0GWB2 263 aa9.43□□□□□ -0.9
CLN6-212ENST00000636020 Q6ZRX8 168 aa9.43□□□□□ -0.9
CLN6-212ENST00000636020 NDUFC2O95298 119 aa9.41□□□□□ -0.9
CLN6-212ENST00000636020 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
CLN6-212ENST00000636020 A0A0B4J2C4 111 aa9.4□□□□□ -0.9
CLN6-212ENST00000636020 A6NDN8 102 aa9.4□□□□□ -0.9
CLN6-212ENST00000636020 MT2AP02795 61 aa9.39□□□□□ -0.91
CLN6-212ENST00000636020 K7ERJ3 54 aa9.38□□□□□ -0.91
CLN6-212ENST00000636020 KRTAP6-3Q3LI67 103 aa9.38□□□□□ -0.91
CLN6-212ENST00000636020 ST20-AS1Q8NBB2 130 aa9.38□□□□□ -0.91
CLN6-212ENST00000636020 NEBP20929 6669 aa9.36□□□□□ -0.91
CLN6-212ENST00000636020 COL5A1-AS1Q5SY13 56 aa9.35□□□□□ -0.91
CLN6-212ENST00000636020 RAB37Q96AX2 223 aa9.35□□□□□ -0.91
CLN6-212ENST00000636020 KRTAP9-3Q9BYQ3 159 aa9.35□□□□□ -0.91
CLN6-212ENST00000636020 TRBV10-2A0A0K0K1G8 114 aa9.34□□□□□ -0.91
CLN6-212ENST00000636020 C1orf195Q5TG92 126 aa9.34□□□□□ -0.91
CLN6-212ENST00000636020 TAX1BP3O14907 124 aa9.33□□□□□ -0.92
CLN6-212ENST00000636020 PRO1854Q9UHT4 67 aa9.33□□□□□ -0.92
CLN6-212ENST00000636020 TRAV13-2A0A0B4J235 113 aa9.32□□□□□ -0.92
CLN6-212ENST00000636020 LINC00846Q9NV44 126 aa9.32□□□□□ -0.92
CLN6-212ENST00000636020 MT1FP04733 61 aa9.31□□□□□ -0.92
CLN6-212ENST00000636020 CD164Q04900 197 aa9.31□□□□□ -0.92
CLN6-212ENST00000636020 KRTAP19-6Q3LI70 58 aa9.3□□□□□ -0.92
CLN6-212ENST00000636020 Q5XG85 94 aa9.3□□□□□ -0.92
CLN6-212ENST00000636020 SPRR1BP22528 89 aa9.29□□□□□ -0.92
CLN6-212ENST00000636020 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
CLN6-212ENST00000636020 H7C2G1 150 aa9.27□□□□□ -0.93
CLN6-212ENST00000636020 OR13C6PQ8NH95 151 aa9.27□□□□□ -0.93
CLN6-212ENST00000636020 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
CLN6-212ENST00000636020 NAA38Q9BRA0 125 aaKnown RBP9.26□□□□□ -0.93
CLN6-212ENST00000636020 H3BUT2 72 aa9.24□□□□□ -0.93
CLN6-212ENST00000636020 Q1RN00 199 aa9.24□□□□□ -0.93
CLN6-212ENST00000636020 SMIM11BQ8TCY0 68 aa9.24□□□□□ -0.93
CLN6-212ENST00000636020 LAMTOR3Q9UHA4 124 aa9.24□□□□□ -0.93
CLN6-212ENST00000636020 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
CLN6-212ENST00000636020 TRIAP1O43715 76 aa9.22□□□□□ -0.93
CLN6-212ENST00000636020 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
CLN6-212ENST00000636020 TRAV23DV6A0A075B6W5 121 aa9.21□□□□□ -0.94
CLN6-212ENST00000636020 ATP11AUNQ6ZP68 121 aa9.21□□□□□ -0.94
CLN6-212ENST00000636020 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
CLN6-212ENST00000636020 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
CLN6-212ENST00000636020 PSMB2P49721 201 aa9.19□□□□□ -0.94
CLN6-212ENST00000636020 CBY1Q9Y3M2 126 aa9.19□□□□□ -0.94
CLN6-212ENST00000636020 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
CLN6-212ENST00000636020 MUC12Q9UKN1 5478 aa9.16□□□□□ -0.94
CLN6-212ENST00000636020 A0A1B0GV90 55 aa9.16□□□□□ -0.94
CLN6-212ENST00000636020 Q75L30 129 aa9.16□□□□□ -0.94
CLN6-212ENST00000636020 FABP2P12104 132 aa9.15□□□□□ -0.94
CLN6-212ENST00000636020 LYRM7Q5U5X0 104 aa9.15□□□□□ -0.94
CLN6-212ENST00000636020 COX6CP09669 75 aa9.14□□□□□ -0.95
CLN6-212ENST00000636020 TRBV7-6A0A0J9YX20 115 aa9.13□□□□□ -0.95
CLN6-212ENST00000636020 SCGB1C2P0DMR2 95 aa9.13□□□□□ -0.95
CLN6-212ENST00000636020 H0YGX0 51 aa9.12□□□□□ -0.95
CLN6-212ENST00000636020 TCL1BO95988 128 aa9.12□□□□□ -0.95
CLN6-212ENST00000636020 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
CLN6-212ENST00000636020 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
CLN6-212ENST00000636020 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
CLN6-212ENST00000636020 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
CLN6-212ENST00000636020 DHRS4-AS1Q9P1J3 65 aa9.11□□□□□ -0.95
CLN6-212ENST00000636020 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
CLN6-212ENST00000636020 K7EP34 96 aa9.1□□□□□ -0.95
CLN6-212ENST00000636020 LST1O00453 97 aa9.1□□□□□ -0.95
CLN6-212ENST00000636020 COX7BP24311 80 aa9.1□□□□□ -0.95
CLN6-212ENST00000636020 VAMP3Q15836 100 aa9.1□□□□□ -0.95
CLN6-212ENST00000636020 TRBV20-1A0A075B6N2 111 aa9.09□□□□□ -0.95
CLN6-212ENST00000636020 ATXN8Q156A1 80 aa9.07□□□□□ -0.96
CLN6-212ENST00000636020 LINC00575Q6W349 94 aa9.07□□□□□ -0.96
CLN6-212ENST00000636020 A0A1B0GX51 115 aa9.06□□□□□ -0.96
CLN6-212ENST00000636020 KRTAP20-1Q3LI63 56 aa9.06□□□□□ -0.96
CLN6-212ENST00000636020 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
CLN6-212ENST00000636020 OBSCN-AS1Q96MR7 158 aa9.06□□□□□ -0.96
CLN6-212ENST00000636020 TRACP01848 142 aa9.05□□□□□ -0.96
CLN6-212ENST00000636020 GTF2H5Q6ZYL4 71 aa9.05□□□□□ -0.96
CLN6-212ENST00000636020 TEX49A0A1B0GTD5 131 aa9.04□□□□□ -0.96
CLN6-212ENST00000636020 H3BMG7 143 aa9.04□□□□□ -0.96
CLN6-212ENST00000636020 hADV29S1A0JD25 119 aa9.02□□□□□ -0.97
CLN6-212ENST00000636020 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.97
CLN6-212ENST00000636020 UBE2V1Q13404 147 aa9.01□□□□□ -0.97
CLN6-212ENST00000636020 PRO0461Q9UI25 63 aa8.99□□□□□ -0.97
CLN6-212ENST00000636020 C9JAW5 83 aa8.98□□□□□ -0.97
CLN6-212ENST00000636020 SNCGO76070 127 aa8.97□□□□□ -0.97
CLN6-212ENST00000636020 DNAL4O96015 105 aa8.97□□□□□ -0.97
CLN6-212ENST00000636020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
CLN6-212ENST00000636020 Q6ZQY7 126 aa8.97□□□□□ -0.97
CLN6-212ENST00000636020 MTURNQ8N3F0 131 aa8.97□□□□□ -0.97
CLN6-212ENST00000636020 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms