RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CHTF8P0CG12 524 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 LCE2CQ5TA81 110 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 LINC00846Q9NV44 126 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-230ENST00000634433 A0A096LNI7 61 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 KRTAP4-16G5E9R7 235 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-230ENST00000634433 Q6JHZ5 121 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 C9orf163Q8N9P6 203 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 SACSQ9NZJ4 4579 aa4.55□□□□□ -1.68
BRCA1-230ENST00000634433 IGKV2-24A0A0C4DH68 120 aa4.54□□□□□ -1.68
BRCA1-230ENST00000634433 EPM2AB3EWF7 344 aa4.54□□□□□ -1.68
BRCA1-230ENST00000634433 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
BRCA1-230ENST00000634433 KRTAP7-1Q8IUC3 87 aa4.54□□□□□ -1.68
BRCA1-230ENST00000634433 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
BRCA1-230ENST00000634433 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
BRCA1-230ENST00000634433 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
BRCA1-230ENST00000634433 Q6ZRN7 208 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-230ENST00000634433 CSMD3Q7Z407 3707 aa4.53□□□□□ -1.68
BRCA1-230ENST00000634433 TRBV7-4A0A0J9YYF1 115 aa4.53□□□□□ -1.68
BRCA1-230ENST00000634433 CRYGAP11844 174 aa4.53□□□□□ -1.68
BRCA1-230ENST00000634433 LYSTQ99698 3801 aa4.53□□□□□ -1.68
BRCA1-230ENST00000634433 DNAH10Q8IVF4 4471 aa4.52□□□□□ -1.69
BRCA1-230ENST00000634433 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
BRCA1-230ENST00000634433 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
BRCA1-230ENST00000634433 UBE2BP63146 152 aa4.52□□□□□ -1.69
BRCA1-230ENST00000634433 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-230ENST00000634433 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
BRCA1-230ENST00000634433 M0R2N4 97 aa4.52□□□□□ -1.69
BRCA1-230ENST00000634433 DEFB105AQ8NG35 78 aa4.52□□□□□ -1.69
BRCA1-230ENST00000634433 Q8N377 158 aa4.51□□□□□ -1.69
BRCA1-230ENST00000634433 Q9BRP9 147 aa4.51□□□□□ -1.69
BRCA1-230ENST00000634433 IGLV5-48A0A075B6I7 105 aa4.5□□□□□ -1.69
BRCA1-230ENST00000634433 A0A087WTM6 91 aa4.5□□□□□ -1.69
BRCA1-230ENST00000634433 A0A1B0GW54 56 aa4.5□□□□□ -1.69
BRCA1-230ENST00000634433 Q6ZR54 194 aa4.5□□□□□ -1.69
BRCA1-230ENST00000634433 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
BRCA1-230ENST00000634433 IGKV3D-7A0A0C4DH55 119 aa4.5□□□□□ -1.69
BRCA1-230ENST00000634433 LINC01547P58512 204 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-230ENST00000634433 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
BRCA1-230ENST00000634433 STARD9Q9P2P6 4700 aa4.49□□□□□ -1.69
BRCA1-230ENST00000634433 C1orf134Q5TEV5 83 aa4.49□□□□□ -1.69
BRCA1-230ENST00000634433 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
BRCA1-230ENST00000634433 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
BRCA1-230ENST00000634433 F8WEM9 126 aa4.47□□□□□ -1.69
BRCA1-230ENST00000634433 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.694e-6■□□□□ 8.3
BRCA1-230ENST00000634433 ST20-AS1Q8NBB2 130 aa4.47□□□□□ -1.69
BRCA1-230ENST00000634433 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
BRCA1-230ENST00000634433 ATOX1O00244 68 aa4.47□□□□□ -1.69
BRCA1-230ENST00000634433 ERC2-IT1O76042 136 aa4.47□□□□□ -1.69
BRCA1-230ENST00000634433 CXCL6P80162 114 aa4.47□□□□□ -1.69
BRCA1-230ENST00000634433 HERC2O95714 4834 aa4.46□□□□□ -1.69
BRCA1-230ENST00000634433 LY6G6CO95867 125 aa4.46□□□□□ -1.69
BRCA1-230ENST00000634433 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.69
BRCA1-230ENST00000634433 HAMPP81172 84 aa4.46□□□□□ -1.69
BRCA1-230ENST00000634433 NOTCH2NLQ7Z3S9 236 aa4.46□□□□□ -1.69
BRCA1-230ENST00000634433 SPACA4Q8TDM5 124 aa4.46□□□□□ -1.69
BRCA1-230ENST00000634433 RTL8CO15255 209 aa4.46□□□□□ -1.7
BRCA1-230ENST00000634433 COX7CP15954 63 aa4.46□□□□□ -1.7
BRCA1-230ENST00000634433 UBE2AP49459 152 aa4.46□□□□□ -1.7
BRCA1-230ENST00000634433 C1orf137Q5JT78 98 aa4.46□□□□□ -1.7
BRCA1-230ENST00000634433 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
BRCA1-230ENST00000634433 BCE1O60756 84 aa4.45□□□□□ -1.7
BRCA1-230ENST00000634433 NREPQ16612 68 aa4.45□□□□□ -1.7
BRCA1-230ENST00000634433 HIGD2AQ9BW72 106 aa4.45□□□□□ -1.7
BRCA1-230ENST00000634433 DNAH6Q9C0G6 4158 aa4.45□□□□□ -1.7
BRCA1-230ENST00000634433 PRLHP81277 87 aa4.45□□□□□ -1.7
BRCA1-230ENST00000634433 C7orf65Q6ZTY9 151 aa4.44□□□□□ -1.7
BRCA1-230ENST00000634433 LINC00476Q8WZB0 136 aa4.44□□□□□ -1.7
BRCA1-230ENST00000634433 SMIM29Q86T20 159 aa4.43□□□□□ -1.7
BRCA1-230ENST00000634433 Q8NBF4 154 aa4.43□□□□□ -1.7
BRCA1-230ENST00000634433 IGLV8-61A0A075B6I0 122 aa4.43□□□□□ -1.7
BRCA1-230ENST00000634433 LCE2BO14633 110 aa4.43□□□□□ -1.7
BRCA1-230ENST00000634433 SPRR1BP22528 89 aa4.43□□□□□ -1.7
BRCA1-230ENST00000634433 SPRR4Q96PI1 79 aa4.43□□□□□ -1.7
BRCA1-230ENST00000634433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-230ENST00000634433 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
BRCA1-230ENST00000634433 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
BRCA1-230ENST00000634433 PANO1I0J062 215 aa4.42□□□□□ -1.7
BRCA1-230ENST00000634433 PLAC8Q9NZF1 115 aa4.42□□□□□ -1.7
BRCA1-230ENST00000634433 A0A087WVE0 104 aa4.42□□□□□ -1.7
BRCA1-230ENST00000634433 A0A1W2PNM2 257 aa4.42□□□□□ -1.7
BRCA1-230ENST00000634433 KRTAP11-1Q8IUC1 163 aa4.42□□□□□ -1.7
BRCA1-230ENST00000634433 DNAH17Q9UFH2 4485 aa4.42□□□□□ -1.7
BRCA1-230ENST00000634433 C8orf17Q9NRJ1 99 aa4.41□□□□□ -1.7
BRCA1-230ENST00000634433 KMT2AQ03164 3969 aa4.41□□□□□ -1.7
BRCA1-230ENST00000634433 BPY2O14599 106 aa4.41□□□□□ -1.7
BRCA1-230ENST00000634433 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
BRCA1-230ENST00000634433 KRTAP13-1Q8IUC0 172 aa4.4□□□□□ -1.7
BRCA1-230ENST00000634433 SERP2Q8N6R1 65 aa4.4□□□□□ -1.71
BRCA1-230ENST00000634433 IGFL1Q6UW32 110 aa4.39□□□□□ -1.71
BRCA1-230ENST00000634433 A6NED7 52 aa4.39□□□□□ -1.71
BRCA1-230ENST00000634433 MPLKIPQ8TAP9 179 aa4.39□□□□□ -1.71
BRCA1-230ENST00000634433 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
BRCA1-230ENST00000634433 PSORS1C2Q9UIG4 136 aa4.37□□□□□ -1.71
BRCA1-230ENST00000634433 A6NN06 94 aa4.37□□□□□ -1.71
BRCA1-230ENST00000634433 RPL37AP61513 92 aaKnown RBP4.37□□□□□ -1.71
BRCA1-230ENST00000634433 ZNF861PO60384 105 aa4.36□□□□□ -1.71
BRCA1-230ENST00000634433 TRAV7A0A075B6U4 112 aa4.36□□□□□ -1.71
BRCA1-230ENST00000634433 LINC00483Q53H64 154 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms