RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 XIRP2A4UGR9 3374 aa8.96□□□□□ -0.98
UBE3A-220ENST00000630424 A0A0D9SG42 100 aa8.95□□□□□ -0.98
UBE3A-220ENST00000630424 DNAH14Q0VDD8 3507 aa8.95□□□□□ -0.98
UBE3A-220ENST00000630424 GCN1Q92616 2671 aaKnown RBP8.94□□□□□ -0.98
UBE3A-220ENST00000630424 MIR22HGQ0VDD5 57 aa8.94□□□□□ -0.98
UBE3A-220ENST00000630424 IGSF10Q6WRI0 2623 aa8.93□□□□□ -0.98
UBE3A-220ENST00000630424 TRANK1O15050 2925 aa8.93□□□□□ -0.98
UBE3A-220ENST00000630424 DSPP15924 2871 aaKnown RBP8.92□□□□□ -0.98
UBE3A-220ENST00000630424 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
UBE3A-220ENST00000630424 FAM104AQ969W3 186 aa8.9□□□□□ -0.98
UBE3A-220ENST00000630424 CFAP54Q96N23 3096 aa8.9□□□□□ -0.98
UBE3A-220ENST00000630424 WIPF1O43516 503 aa8.89□□□□□ -0.99
UBE3A-220ENST00000630424 KLKP1Q107X0 134 aa8.88□□□□□ -0.99
UBE3A-220ENST00000630424 UNC80Q8N2C7 3258 aa8.87□□□□□ -0.99
UBE3A-220ENST00000630424 SZT2Q5T011 3432 aa8.85□□□□□ -0.99
UBE3A-220ENST00000630424 CD164Q04900 197 aa8.84□□□□□ -0.99
UBE3A-220ENST00000630424 WDFY4Q6ZS81 3184 aa8.83□□□□□ -1
UBE3A-220ENST00000630424 CAMK2N1Q7Z7J9 78 aa8.81□□□□□ -1
UBE3A-220ENST00000630424 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
UBE3A-220ENST00000630424 EYSQ5T1H1 3165 aa8.79□□□□□ -1
UBE3A-220ENST00000630424 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
UBE3A-220ENST00000630424 FRYQ5TBA9 3013 aa8.78□□□□□ -1
UBE3A-220ENST00000630424 NBEAL2Q6ZNJ1 2754 aa8.78□□□□□ -1
UBE3A-220ENST00000630424 H7BZZ5 65 aa8.78□□□□□ -1
UBE3A-220ENST00000630424 TRIOO75962 3097 aa8.76□□□□□ -1.01
UBE3A-220ENST00000630424 CDC42SE1Q9NRR8 79 aa8.76□□□□□ -1.01
UBE3A-220ENST00000630424 LCE6AA0A183 80 aa8.73□□□□□ -1.01
UBE3A-220ENST00000630424 Q5VSD8 79 aa8.73□□□□□ -1.01
UBE3A-220ENST00000630424 SPANXA2-OT1Q8N9U9 137 aa8.73□□□□□ -1.01
UBE3A-220ENST00000630424 MYO15AQ9UKN7 3530 aa8.71□□□□□ -1.02
UBE3A-220ENST00000630424 KRTAP1-5Q9BYS1 174 aa8.7□□□□□ -1.02
UBE3A-220ENST00000630424 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
UBE3A-220ENST00000630424 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
UBE3A-220ENST00000630424 FLNCQ14315 2725 aa8.68□□□□□ -1.02
UBE3A-220ENST00000630424 KMT2BQ9UMN6 2715 aaPredicted RBP8.68□□□□□ -1.02
UBE3A-220ENST00000630424 HRES1P13985 223 aa8.68□□□□□ -1.02
UBE3A-220ENST00000630424 VCANP13611 3396 aa8.68□□□□□ -1.02
UBE3A-220ENST00000630424 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
UBE3A-220ENST00000630424 SEC61BP60468 96 aaKnown RBP8.65□□□□□ -1.02
UBE3A-220ENST00000630424 KRTAP10-1P60331 282 aa8.64□□□□□ -1.03
UBE3A-220ENST00000630424 OCR1Q9BZK8 76 aa8.64□□□□□ -1.03
UBE3A-220ENST00000630424 A0A1B0GU33 70 aa8.63□□□□□ -1.03
UBE3A-220ENST00000630424 ITPR2Q14571 2701 aa8.63□□□□□ -1.03
UBE3A-220ENST00000630424 ITPR1Q14643 2758 aa8.63□□□□□ -1.03
UBE3A-220ENST00000630424 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
UBE3A-220ENST00000630424 KRTAP10-2P60368 255 aa8.62□□□□□ -1.03
UBE3A-220ENST00000630424 TACC2O95359 2948 aa8.62□□□□□ -1.03
UBE3A-220ENST00000630424 SPRR1AP35321 89 aa8.62□□□□□ -1.03
UBE3A-220ENST00000630424 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
UBE3A-220ENST00000630424 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
UBE3A-220ENST00000630424 Q8NDZ9 215 aa8.61□□□□□ -1.03
UBE3A-220ENST00000630424 SPEGQ15772 3267 aa8.61□□□□□ -1.03
UBE3A-220ENST00000630424 SPINK7P58062 85 aa8.6□□□□□ -1.03
UBE3A-220ENST00000630424 HIVEP1P15822 2718 aa8.59□□□□□ -1.03
UBE3A-220ENST00000630424 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
UBE3A-220ENST00000630424 COL6A3P12111 3177 aa8.58□□□□□ -1.04
UBE3A-220ENST00000630424 LAMA1P25391 3075 aa8.58□□□□□ -1.04
UBE3A-220ENST00000630424 S4R3F8 94 aa8.57□□□□□ -1.04
UBE3A-220ENST00000630424 LUZP6Q538Z0 58 aa8.56□□□□□ -1.04
UBE3A-220ENST00000630424 Q1T7F1 81 aa8.55□□□□□ -1.04
UBE3A-220ENST00000630424 R4GN34 69 aa8.55□□□□□ -1.04
UBE3A-220ENST00000630424 SPRR1BP22528 89 aa8.54□□□□□ -1.04
UBE3A-220ENST00000630424 UTP20O75691 2785 aaKnown RBP8.53□□□□□ -1.04
UBE3A-220ENST00000630424 DMDP11532 3685 aa8.51□□□□□ -1.05
UBE3A-220ENST00000630424 Q5W150 140 aa8.5□□□□□ -1.05
UBE3A-220ENST00000630424 DMXL2Q8TDJ6 3036 aa8.5□□□□□ -1.05
UBE3A-220ENST00000630424 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
UBE3A-220ENST00000630424 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
UBE3A-220ENST00000630424 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
UBE3A-220ENST00000630424 KTN1-AS1Q86SY8 53 aa8.47□□□□□ -1.05
UBE3A-220ENST00000630424 LCA10Q71F78 164 aa8.46□□□□□ -1.05
UBE3A-220ENST00000630424 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
UBE3A-220ENST00000630424 PANO1I0J062 215 aa8.43□□□□□ -1.06
UBE3A-220ENST00000630424 DMAC1Q96GE9 116 aa8.43□□□□□ -1.06
UBE3A-220ENST00000630424 Q6ZR54 194 aa8.42□□□□□ -1.06
UBE3A-220ENST00000630424 FREM2Q5SZK8 3169 aa8.39□□□□□ -1.07
UBE3A-220ENST00000630424 FP248Q71RG6 208 aaPredicted RBP8.38□□□□□ -1.07
UBE3A-220ENST00000630424 OXTP01178 125 aa8.38□□□□□ -1.07
UBE3A-220ENST00000630424 MUC3AQ02505 3323 aa8.37□□□□□ -1.07
UBE3A-220ENST00000630424 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
UBE3A-220ENST00000630424 COL12A1Q99715 3063 aa8.36□□□□□ -1.07
UBE3A-220ENST00000630424 ATMQ13315 3056 aa8.35□□□□□ -1.07
UBE3A-220ENST00000630424 M0QZ58 72 aa8.34□□□□□ -1.07
UBE3A-220ENST00000630424 ASH1LQ9NR48 2969 aaKnown RBP8.34□□□□□ -1.07
UBE3A-220ENST00000630424 A0A087X002 238 aa8.34□□□□□ -1.07
UBE3A-220ENST00000630424 FRYLO94915 3013 aa8.33□□□□□ -1.08
UBE3A-220ENST00000630424 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
UBE3A-220ENST00000630424 SPENQ96T58 3664 aaKnown RBP8.32□□□□□ -1.08
UBE3A-220ENST00000630424 Q75L30 129 aa8.31□□□□□ -1.08
UBE3A-220ENST00000630424 TENM3Q9P273 2699 aa8.3□□□□□ -1.08
UBE3A-220ENST00000630424 PLAC4Q8WY50 150 aa8.29□□□□□ -1.08
UBE3A-220ENST00000630424 NIPBLQ6KC79 2804 aaeCLIP8.28□□□□□ -1.088e-8■■■■■ 41.9
UBE3A-220ENST00000630424 CELSR2Q9HCU4 2923 aa8.25□□□□□ -1.09
UBE3A-220ENST00000630424 BOD1L1Q8NFC6 3051 aa8.25□□□□□ -1.09
UBE3A-220ENST00000630424 RPL37P61927 97 aaKnown RBP8.24□□□□□ -1.09
UBE3A-220ENST00000630424 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
UBE3A-220ENST00000630424 KALRNO60229 2985 aa8.21□□□□□ -1.09
UBE3A-220ENST00000630424 APCP25054 2843 aa8.21□□□□□ -1.1
UBE3A-220ENST00000630424 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
UBE3A-220ENST00000630424 PRAC1Q96KF2 57 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms