RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 A0A0G2JQZ4 141 aa8.38□□□□□ -1.07
SYNGAP1-208ENST00000629380 A0A1W2PNN7 141 aa8.38□□□□□ -1.07
SYNGAP1-208ENST00000629380 KRTAP1-1Q07627 177 aa8.38□□□□□ -1.07
SYNGAP1-208ENST00000629380 A0A1W2PNM2 257 aa8.37□□□□□ -1.07
SYNGAP1-208ENST00000629380 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
SYNGAP1-208ENST00000629380 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
SYNGAP1-208ENST00000629380 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
SYNGAP1-208ENST00000629380 NBEAL2Q6ZNJ1 2754 aa8.31□□□□□ -1.08
SYNGAP1-208ENST00000629380 H3BS24 57 aa8.3□□□□□ -1.08
SYNGAP1-208ENST00000629380 R4GN34 69 aa8.29□□□□□ -1.08
SYNGAP1-208ENST00000629380 SPINK7P58062 85 aa8.28□□□□□ -1.08
SYNGAP1-208ENST00000629380 TNP2Q05952 138 aa8.27□□□□□ -1.09
SYNGAP1-208ENST00000629380 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
SYNGAP1-208ENST00000629380 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
SYNGAP1-208ENST00000629380 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
SYNGAP1-208ENST00000629380 CEP350Q5VT06 3117 aa8.23□□□□□ -1.09
SYNGAP1-208ENST00000629380 SEC61BP60468 96 aaKnown RBP8.23□□□□□ -1.09
SYNGAP1-208ENST00000629380 ITPR1Q14643 2758 aa8.22□□□□□ -1.09
SYNGAP1-208ENST00000629380 ROMO1P60602 79 aa8.21□□□□□ -1.1
SYNGAP1-208ENST00000629380 Q8N9P0 234 aaPredicted RBP8.18□□□□□ -1.1
SYNGAP1-208ENST00000629380 UBR5O95071 2799 aaPredicted RBP8.18□□□□□ -1.1
SYNGAP1-208ENST00000629380 Q5W150 140 aa8.17□□□□□ -1.1
SYNGAP1-208ENST00000629380 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.1
SYNGAP1-208ENST00000629380 PLAC4Q8WY50 150 aa8.14□□□□□ -1.11
SYNGAP1-208ENST00000629380 PLAC8Q9NZF1 115 aa8.14□□□□□ -1.11
SYNGAP1-208ENST00000629380 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
SYNGAP1-208ENST00000629380 Q5VV11 94 aa8.12□□□□□ -1.11
SYNGAP1-208ENST00000629380 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
SYNGAP1-208ENST00000629380 TRANK1O15050 2925 aa8.1□□□□□ -1.11
SYNGAP1-208ENST00000629380 M0QZ58 72 aa8.09□□□□□ -1.11
SYNGAP1-208ENST00000629380 PRAC1Q96KF2 57 aa8.08□□□□□ -1.12
SYNGAP1-208ENST00000629380 DNAH12Q6ZR08 3092 aa8.07□□□□□ -1.12
SYNGAP1-208ENST00000629380 FLNCQ14315 2725 aa8.05□□□□□ -1.12
SYNGAP1-208ENST00000629380 LCE6AA0A183 80 aa8.05□□□□□ -1.12
SYNGAP1-208ENST00000629380 A0A0C4DFX4 3053 aa8.04□□□□□ -1.12
SYNGAP1-208ENST00000629380 Q5XG85 94 aa8.04□□□□□ -1.12
SYNGAP1-208ENST00000629380 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.12
SYNGAP1-208ENST00000629380 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
SYNGAP1-208ENST00000629380 SRCAPQ6ZRS2 3230 aa8□□□□□ -1.13
SYNGAP1-208ENST00000629380 TENM1Q9UKZ4 2725 aa8□□□□□ -1.13
SYNGAP1-208ENST00000629380 A0A087X002 238 aa8□□□□□ -1.13
SYNGAP1-208ENST00000629380 DSPP15924 2871 aaKnown RBP7.99□□□□□ -1.13
SYNGAP1-208ENST00000629380 SPRR1AP35321 89 aa7.99□□□□□ -1.13
SYNGAP1-208ENST00000629380 Q5VSD8 79 aa7.99□□□□□ -1.13
SYNGAP1-208ENST00000629380 SPRR1BP22528 89 aa7.98□□□□□ -1.13
SYNGAP1-208ENST00000629380 HIVEP1P15822 2718 aa7.95□□□□□ -1.14
SYNGAP1-208ENST00000629380 PANO1I0J062 215 aa7.95□□□□□ -1.14
SYNGAP1-208ENST00000629380 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
SYNGAP1-208ENST00000629380 KRTAP21-3Q3LHN1 58 aa7.93□□□□□ -1.14
SYNGAP1-208ENST00000629380 OXTP01178 125 aa7.93□□□□□ -1.14
SYNGAP1-208ENST00000629380 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
SYNGAP1-208ENST00000629380 LRBAP50851 2863 aa7.92□□□□□ -1.14
SYNGAP1-208ENST00000629380 Q6ZR54 194 aa7.92□□□□□ -1.14
SYNGAP1-208ENST00000629380 GOLGB1Q14789 3259 aaKnown RBP7.91□□□□□ -1.14
SYNGAP1-208ENST00000629380 TENM3Q9P273 2699 aa7.91□□□□□ -1.14
SYNGAP1-208ENST00000629380 NF1P21359 2839 aa7.91□□□□□ -1.14
SYNGAP1-208ENST00000629380 CHD9Q3L8U1 2897 aa7.89□□□□□ -1.15
SYNGAP1-208ENST00000629380 KALRNO60229 2985 aa7.87□□□□□ -1.15
SYNGAP1-208ENST00000629380 CFAP54Q96N23 3096 aa7.86□□□□□ -1.15
SYNGAP1-208ENST00000629380 MGAQ8IWI9 3026 aa7.84□□□□□ -1.15
SYNGAP1-208ENST00000629380 KRTAP26-1Q6PEX3 210 aa7.83□□□□□ -1.16
SYNGAP1-208ENST00000629380 Q8NDZ9 215 aa7.79□□□□□ -1.16
SYNGAP1-208ENST00000629380 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
SYNGAP1-208ENST00000629380 NIPBLQ6KC79 2804 aaeCLIP7.78□□□□□ -1.16
SYNGAP1-208ENST00000629380 C5orf42Q9H799 3197 aa7.77□□□□□ -1.16
SYNGAP1-208ENST00000629380 LAMA2P24043 3122 aaKnown RBP7.77□□□□□ -1.17
SYNGAP1-208ENST00000629380 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.17
SYNGAP1-208ENST00000629380 CHD7Q9P2D1 2997 aa7.76□□□□□ -1.17
SYNGAP1-208ENST00000629380 C20orf166-AS1Q96NR2 134 aa7.76□□□□□ -1.17
SYNGAP1-208ENST00000629380 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
SYNGAP1-208ENST00000629380 PCNTO95613 3336 aa7.76□□□□□ -1.17
SYNGAP1-208ENST00000629380 FRYLO94915 3013 aa7.71□□□□□ -1.18
SYNGAP1-208ENST00000629380 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
SYNGAP1-208ENST00000629380 KRTAP10-1P60331 282 aa7.69□□□□□ -1.18
SYNGAP1-208ENST00000629380 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
SYNGAP1-208ENST00000629380 A8MUU9 505 aa7.67□□□□□ -1.18
SYNGAP1-208ENST00000629380 KRTAP10-2P60368 255 aa7.64□□□□□ -1.19
SYNGAP1-208ENST00000629380 CELSR2Q9HCU4 2923 aa7.62□□□□□ -1.19
SYNGAP1-208ENST00000629380 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
SYNGAP1-208ENST00000629380 FRYQ5TBA9 3013 aa7.6□□□□□ -1.19
SYNGAP1-208ENST00000629380 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
SYNGAP1-208ENST00000629380 TGP01266 2768 aa7.59□□□□□ -1.19
SYNGAP1-208ENST00000629380 A6NN06 94 aa7.57□□□□□ -1.2
SYNGAP1-208ENST00000629380 TNRC18O15417 2968 aaPredicted RBP7.57□□□□□ -1.2
SYNGAP1-208ENST00000629380 UTRNP46939 3433 aa7.57□□□□□ -1.2
SYNGAP1-208ENST00000629380 ASH1LQ9NR48 2969 aaKnown RBP7.56□□□□□ -1.2
SYNGAP1-208ENST00000629380 TNP1P09430 55 aa7.56□□□□□ -1.2
SYNGAP1-208ENST00000629380 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
SYNGAP1-208ENST00000629380 CRYBG3Q68DQ2 2970 aa7.54□□□□□ -1.2
SYNGAP1-208ENST00000629380 NDUFAF8A1L188 74 aa7.54□□□□□ -1.2
SYNGAP1-208ENST00000629380 PDZD2O15018 2839 aa7.53□□□□□ -1.2
SYNGAP1-208ENST00000629380 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
SYNGAP1-208ENST00000629380 TRIOO75962 3097 aa7.46□□□□□ -1.22
SYNGAP1-208ENST00000629380 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
SYNGAP1-208ENST00000629380 TENM4Q6N022 2769 aa7.43□□□□□ -1.22
SYNGAP1-208ENST00000629380 TACC2O95359 2948 aa7.43□□□□□ -1.22
SYNGAP1-208ENST00000629380 A8MU10 97 aa7.42□□□□□ -1.22
SYNGAP1-208ENST00000629380 ZZEF1O43149 2961 aa7.4□□□□□ -1.22
SYNGAP1-208ENST00000629380 VPS13AQ96RL7 3174 aa7.4□□□□□ -1.23
SYNGAP1-208ENST00000629380 Q6ZRN7 208 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms