RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 Q8NBF4 154 aa5.6□□□□□ -1.51
VCL-207ENST00000624354 IGLV5-37A0A075B6J1 123 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 FAM168BA1KXE4 195 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 SPRR1AP35321 89 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 UBE2AP49459 152 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 TNP2Q05952 138 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 Q5VV11 94 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 CHKB-CPT1BH3BT56 60 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 ST20-AS1Q8NBB2 130 aa5.59□□□□□ -1.51
VCL-207ENST00000624354 NDUFB1O75438 58 aa5.59□□□□□ -1.52
VCL-207ENST00000624354 LINC00588Q9Y4M8 146 aa5.58□□□□□ -1.52
VCL-207ENST00000624354 RBM12B-AS1Q9P1G2 102 aa5.58□□□□□ -1.52
VCL-207ENST00000624354 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
VCL-207ENST00000624354 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
VCL-207ENST00000624354 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
VCL-207ENST00000624354 DEFB116Q30KQ4 102 aa5.57□□□□□ -1.52
VCL-207ENST00000624354 SPRR4Q96PI1 79 aa5.57□□□□□ -1.52
VCL-207ENST00000624354 B9D2Q9BPU9 175 aa5.56□□□□□ -1.52
VCL-207ENST00000624354 C16orf90A8MZG2 172 aa5.56□□□□□ -1.52
VCL-207ENST00000624354 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
VCL-207ENST00000624354 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
VCL-207ENST00000624354 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
VCL-207ENST00000624354 K7EQZ3 153 aa5.55□□□□□ -1.52
VCL-207ENST00000624354 MP68P56378 58 aa5.55□□□□□ -1.52
VCL-207ENST00000624354 DSCR10P59022 87 aa5.55□□□□□ -1.52
VCL-207ENST00000624354 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
VCL-207ENST00000624354 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
VCL-207ENST00000624354 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
VCL-207ENST00000624354 NDUFS5O43920 106 aa5.54□□□□□ -1.52
VCL-207ENST00000624354 REG3GQ6UW15 175 aa5.54□□□□□ -1.52
VCL-207ENST00000624354 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
VCL-207ENST00000624354 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
VCL-207ENST00000624354 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
VCL-207ENST00000624354 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
VCL-207ENST00000624354 CMYA5Q8N3K9 4069 aa5.52□□□□□ -1.53
VCL-207ENST00000624354 A6NED7 52 aa5.51□□□□□ -1.53
VCL-207ENST00000624354 IGFL1Q6UW32 110 aa5.49□□□□□ -1.53
VCL-207ENST00000624354 LCA10Q71F78 164 aa5.49□□□□□ -1.53
VCL-207ENST00000624354 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
VCL-207ENST00000624354 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
VCL-207ENST00000624354 PHF5AQ7RTV0 110 aaKnown RBP5.49□□□□□ -1.53
VCL-207ENST00000624354 Q75L30 129 aa5.48□□□□□ -1.53
VCL-207ENST00000624354 FBN3Q75N90 2809 aa5.48□□□□□ -1.53
VCL-207ENST00000624354 LYSTQ99698 3801 aa5.48□□□□□ -1.53
VCL-207ENST00000624354 A0A096LNI7 61 aa5.48□□□□□ -1.53
VCL-207ENST00000624354 A6NN06 94 aa5.48□□□□□ -1.53
VCL-207ENST00000624354 PRLHP81277 87 aa5.48□□□□□ -1.53
VCL-207ENST00000624354 A0A087WSZ3 146 aa5.48□□□□□ -1.53
VCL-207ENST00000624354 IGKV2-24A0A0C4DH68 120 aa5.47□□□□□ -1.53
VCL-207ENST00000624354 K7EIL1 84 aa5.47□□□□□ -1.53
VCL-207ENST00000624354 IGLV8-61A0A075B6I0 122 aa5.46□□□□□ -1.54
VCL-207ENST00000624354 H0Y9P7 68 aa5.46□□□□□ -1.54
VCL-207ENST00000624354 C7orf65Q6ZTY9 151 aa5.45□□□□□ -1.54
VCL-207ENST00000624354 PRKDCP78527 4128 aaKnown RBP5.45□□□□□ -1.54
VCL-207ENST00000624354 LOC101927531A0A1B0GV80 90 aa5.45□□□□□ -1.54
VCL-207ENST00000624354 H3BPC8 53 aa5.45□□□□□ -1.54
VCL-207ENST00000624354 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
VCL-207ENST00000624354 CNBPP62633 177 aaKnown RBP5.43□□□□□ -1.54
VCL-207ENST00000624354 COA5Q86WW8 74 aa5.43□□□□□ -1.54
VCL-207ENST00000624354 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
VCL-207ENST00000624354 C4orf48Q5BLP8 95 aa5.41□□□□□ -1.54
VCL-207ENST00000624354 CASC2Q6XLA1 102 aa5.41□□□□□ -1.54
VCL-207ENST00000624354 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
VCL-207ENST00000624354 MOBPQ13875 183 aa5.4□□□□□ -1.54
VCL-207ENST00000624354 DNAH1Q9P2D7 4330 aa5.4□□□□□ -1.54
VCL-207ENST00000624354 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.55
VCL-207ENST00000624354 KRTAP1-5Q9BYS1 174 aa5.4□□□□□ -1.55
VCL-207ENST00000624354 H0Y9J4 135 aa5.39□□□□□ -1.55
VCL-207ENST00000624354 SPRR1BP22528 89 aa5.39□□□□□ -1.55
VCL-207ENST00000624354 HUWE1Q7Z6Z7 4374 aaKnown RBP5.39□□□□□ -1.55
VCL-207ENST00000624354 C14orf177Q52M58 125 aa5.39□□□□□ -1.55
VCL-207ENST00000624354 A8MWP4 228 aa5.38□□□□□ -1.55
VCL-207ENST00000624354 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
VCL-207ENST00000624354 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
VCL-207ENST00000624354 UBE2DNLQ8IWF7 75 aa5.38□□□□□ -1.55
VCL-207ENST00000624354 IGLV7-46A0A075B6I9 117 aa5.37□□□□□ -1.55
VCL-207ENST00000624354 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
VCL-207ENST00000624354 LINC00472Q9H8W2 130 aa5.37□□□□□ -1.55
VCL-207ENST00000624354 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
VCL-207ENST00000624354 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
VCL-207ENST00000624354 DNAH9Q9NYC9 4486 aa5.34□□□□□ -1.55
VCL-207ENST00000624354 SPINK7P58062 85 aa5.34□□□□□ -1.55
VCL-207ENST00000624354 PCOTHQ58A44 107 aa5.34□□□□□ -1.55
VCL-207ENST00000624354 PLAC8Q9NZF1 115 aa5.33□□□□□ -1.56
VCL-207ENST00000624354 DNAH3Q8TD57 4116 aa5.33□□□□□ -1.56
VCL-207ENST00000624354 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
VCL-207ENST00000624354 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
VCL-207ENST00000624354 APLNQ9ULZ1 77 aa5.31□□□□□ -1.56
VCL-207ENST00000624354 LINC00313P59037 77 aa5.3□□□□□ -1.56
VCL-207ENST00000624354 DNAH10Q8IVF4 4471 aa5.3□□□□□ -1.56
VCL-207ENST00000624354 IGLV9-49A0A0B4J1Y8 123 aa5.29□□□□□ -1.56
VCL-207ENST00000624354 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
VCL-207ENST00000624354 KRTAP13-1Q8IUC0 172 aa5.29□□□□□ -1.56
VCL-207ENST00000624354 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
VCL-207ENST00000624354 KRTAP21-3Q3LHN1 58 aa5.28□□□□□ -1.56
VCL-207ENST00000624354 TP53AIP1Q9HCN2 124 aa5.28□□□□□ -1.56
VCL-207ENST00000624354 PANO1I0J062 215 aa5.28□□□□□ -1.56
VCL-207ENST00000624354 STARD9Q9P2P6 4700 aa5.27□□□□□ -1.57
VCL-207ENST00000624354 NBDYA0A0U1RRE5 68 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms