RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 Q8NBF4 154 aa6□□□□□ -1.45
GGA3-222ENST00000621217 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
GGA3-222ENST00000621217 PRLHP81277 87 aa6□□□□□ -1.45
GGA3-222ENST00000621217 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
GGA3-222ENST00000621217 TGP01266 2768 aa5.99□□□□□ -1.45
GGA3-222ENST00000621217 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
GGA3-222ENST00000621217 REG3GQ6UW15 175 aa5.99□□□□□ -1.45
GGA3-222ENST00000621217 PRR34Q9NV39 138 aa5.99□□□□□ -1.45
GGA3-222ENST00000621217 A0A1B0GU69 56 aa5.98□□□□□ -1.45
GGA3-222ENST00000621217 C4orf48Q5BLP8 95 aa5.98□□□□□ -1.45
GGA3-222ENST00000621217 C15orf56Q8N910 161 aa5.98□□□□□ -1.45
GGA3-222ENST00000621217 ST20-AS1Q8NBB2 130 aa5.98□□□□□ -1.45
GGA3-222ENST00000621217 Q9BRP9 147 aa5.98□□□□□ -1.45
GGA3-222ENST00000621217 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
GGA3-222ENST00000621217 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
GGA3-222ENST00000621217 IGHV6-1A0A0B4J1U7 121 aa5.97□□□□□ -1.45
GGA3-222ENST00000621217 OBSCN-AS1Q96MR7 158 aa5.97□□□□□ -1.45
GGA3-222ENST00000621217 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
GGA3-222ENST00000621217 H3BNG1 76 aa5.96□□□□□ -1.45
GGA3-222ENST00000621217 A0A0G2JQZ4 141 aa5.96□□□□□ -1.46
GGA3-222ENST00000621217 A0A1W2PNN7 141 aa5.96□□□□□ -1.46
GGA3-222ENST00000621217 IGLV6-57P01721 117 aa5.96□□□□□ -1.46
GGA3-222ENST00000621217 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
GGA3-222ENST00000621217 IGLV9-49A0A0B4J1Y8 123 aa5.95□□□□□ -1.46
GGA3-222ENST00000621217 TRBV7-4A0A0J9YYF1 115 aa5.95□□□□□ -1.46
GGA3-222ENST00000621217 ZNF706Q9Y5V0 76 aaPredicted RBP5.95□□□□□ -1.46
GGA3-222ENST00000621217 COA5Q86WW8 74 aa5.95□□□□□ -1.46
GGA3-222ENST00000621217 Q1T7F1 81 aa5.94□□□□□ -1.46
GGA3-222ENST00000621217 ACYP2P14621 99 aa5.94□□□□□ -1.46
GGA3-222ENST00000621217 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
GGA3-222ENST00000621217 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
GGA3-222ENST00000621217 RBM12B-AS1Q9P1G2 102 aa5.92□□□□□ -1.46
GGA3-222ENST00000621217 OXTP01178 125 aa5.92□□□□□ -1.46
GGA3-222ENST00000621217 IGLV5-52A0A0A0MRZ9 124 aa5.92□□□□□ -1.46
GGA3-222ENST00000621217 NBDYA0A0U1RRE5 68 aa5.92□□□□□ -1.46
GGA3-222ENST00000621217 K7EQZ3 153 aa5.92□□□□□ -1.46
GGA3-222ENST00000621217 C1orf134Q5TEV5 83 aa5.92□□□□□ -1.46
GGA3-222ENST00000621217 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
GGA3-222ENST00000621217 LINC00476Q8WZB0 136 aa5.9□□□□□ -1.47
GGA3-222ENST00000621217 CDC42SE1Q9NRR8 79 aa5.89□□□□□ -1.47
GGA3-222ENST00000621217 Q6ZRX8 168 aa5.88□□□□□ -1.47
GGA3-222ENST00000621217 LINC00528Q8N1L1 170 aa5.88□□□□□ -1.47
GGA3-222ENST00000621217 OCR1Q9BZK8 76 aa5.88□□□□□ -1.47
GGA3-222ENST00000621217 SPINK1P00995 79 aa5.88□□□□□ -1.47
GGA3-222ENST00000621217 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
GGA3-222ENST00000621217 RPL37AP61513 92 aaKnown RBP5.85□□□□□ -1.47
GGA3-222ENST00000621217 EPM2AB3EWF7 344 aa5.85□□□□□ -1.47
GGA3-222ENST00000621217 Q8N377 158 aa5.85□□□□□ -1.47
GGA3-222ENST00000621217 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
GGA3-222ENST00000621217 UQCR11O14957 56 aa5.85□□□□□ -1.47
GGA3-222ENST00000621217 APLNQ9ULZ1 77 aa5.85□□□□□ -1.47
GGA3-222ENST00000621217 FAM229BQ4G0N7 80 aa5.84□□□□□ -1.47
GGA3-222ENST00000621217 KRTAP1-5Q9BYS1 174 aa5.84□□□□□ -1.48
GGA3-222ENST00000621217 A8MWP4 228 aa5.83□□□□□ -1.48
GGA3-222ENST00000621217 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
GGA3-222ENST00000621217 H3BS24 57 aa5.82□□□□□ -1.48
GGA3-222ENST00000621217 RTL8CO15255 209 aa5.82□□□□□ -1.48
GGA3-222ENST00000621217 KCNQ1DNQ9H478 68 aa5.82□□□□□ -1.48
GGA3-222ENST00000621217 MOBPQ13875 183 aa5.81□□□□□ -1.48
GGA3-222ENST00000621217 CIRBP-AS1Q8TBR5 109 aa5.81□□□□□ -1.48
GGA3-222ENST00000621217 C16orf90A8MZG2 172 aa5.8□□□□□ -1.48
GGA3-222ENST00000621217 WWC2-AS2Q96NR7 200 aa5.8□□□□□ -1.48
GGA3-222ENST00000621217 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
GGA3-222ENST00000621217 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
GGA3-222ENST00000621217 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
GGA3-222ENST00000621217 IGLV8-61A0A075B6I0 122 aa5.78□□□□□ -1.48
GGA3-222ENST00000621217 IGKV2D-30A0A075B6S6 120 aa5.78□□□□□ -1.48
GGA3-222ENST00000621217 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
GGA3-222ENST00000621217 LINC01554Q52M75 96 aa5.77□□□□□ -1.48
GGA3-222ENST00000621217 Q75L30 129 aa5.77□□□□□ -1.48
GGA3-222ENST00000621217 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
GGA3-222ENST00000621217 A0A1W2PNM2 257 aa5.77□□□□□ -1.49
GGA3-222ENST00000621217 A0A087WTM6 91 aa5.77□□□□□ -1.49
GGA3-222ENST00000621217 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
GGA3-222ENST00000621217 IGFL1Q6UW32 110 aa5.75□□□□□ -1.49
GGA3-222ENST00000621217 C9orf163Q8N9P6 203 aa5.75□□□□□ -1.49
GGA3-222ENST00000621217 MRPL34Q9BQ48 92 aaKnown RBP5.75□□□□□ -1.49
GGA3-222ENST00000621217 TNP2Q05952 138 aa5.74□□□□□ -1.49
GGA3-222ENST00000621217 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
GGA3-222ENST00000621217 Q5VV11 94 aa5.74□□□□□ -1.49
GGA3-222ENST00000621217 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
GGA3-222ENST00000621217 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
GGA3-222ENST00000621217 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
GGA3-222ENST00000621217 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
GGA3-222ENST00000621217 AKAP9Q99996 3911 aa5.72□□□□□ -1.49
GGA3-222ENST00000621217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
GGA3-222ENST00000621217 TLX1NBP0CAT3 122 aa5.71□□□□□ -1.49
GGA3-222ENST00000621217 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
GGA3-222ENST00000621217 C8orf17Q9NRJ1 99 aa5.71□□□□□ -1.5
GGA3-222ENST00000621217 DSCR10P59022 87 aa5.7□□□□□ -1.5
GGA3-222ENST00000621217 FAM229AH3BQW9 127 aa5.7□□□□□ -1.5
GGA3-222ENST00000621217 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
GGA3-222ENST00000621217 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
GGA3-222ENST00000621217 IGLV7-46A0A075B6I9 117 aa5.69□□□□□ -1.5
GGA3-222ENST00000621217 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
GGA3-222ENST00000621217 PRR26Q8N8Z3 221 aa5.68□□□□□ -1.5
GGA3-222ENST00000621217 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
GGA3-222ENST00000621217 LINC00313P59037 77 aa5.67□□□□□ -1.5
GGA3-222ENST00000621217 PANO1I0J062 215 aa5.66□□□□□ -1.5
GGA3-222ENST00000621217 SPRR4Q96PI1 79 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms