RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 KRTAP21-3Q3LHN1 58 aa6.3□□□□□ -1.4
VTA1-205ENST00000620996 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
VTA1-205ENST00000620996 SPTSSBQ8NFR3 76 aa6.3□□□□□ -1.4
VTA1-205ENST00000620996 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
VTA1-205ENST00000620996 PRR4Q16378 134 aa6.3□□□□□ -1.4
VTA1-205ENST00000620996 DHRS4-AS1Q9P1J3 65 aa6.3□□□□□ -1.4
VTA1-205ENST00000620996 Q9BRP9 147 aa6.29□□□□□ -1.4
VTA1-205ENST00000620996 PANO1I0J062 215 aa6.28□□□□□ -1.4
VTA1-205ENST00000620996 H3BQ85 93 aa6.28□□□□□ -1.4
VTA1-205ENST00000620996 RTL8CO15255 209 aa6.28□□□□□ -1.4
VTA1-205ENST00000620996 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
VTA1-205ENST00000620996 ERC2-IT1O76042 136 aa6.28□□□□□ -1.4
VTA1-205ENST00000620996 Q6ZR54 194 aa6.27□□□□□ -1.41
VTA1-205ENST00000620996 VPS13DQ5THJ4 4388 aa6.27□□□□□ -1.41
VTA1-205ENST00000620996 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
VTA1-205ENST00000620996 IGLV5-52A0A0A0MRZ9 124 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 Q8N9L7 120 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 LINC00476Q8WZB0 136 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 SPRR1AP35321 89 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 Q6ZQT0 140 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.26□□□□□ -1.41
VTA1-205ENST00000620996 KMT2AQ03164 3969 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
VTA1-205ENST00000620996 UBE2AP49459 152 aa6.26□□□□□ -1.41
VTA1-205ENST00000620996 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
VTA1-205ENST00000620996 Q8N377 158 aa6.25□□□□□ -1.41
VTA1-205ENST00000620996 NREPQ16612 68 aa6.24□□□□□ -1.41
VTA1-205ENST00000620996 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
VTA1-205ENST00000620996 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
VTA1-205ENST00000620996 TNP2Q05952 138 aa6.24□□□□□ -1.41
VTA1-205ENST00000620996 LOC110117498A0A087WWA1 95 aa6.23□□□□□ -1.41
VTA1-205ENST00000620996 H3BS24 57 aa6.22□□□□□ -1.41
VTA1-205ENST00000620996 PDE6GP18545 87 aa6.22□□□□□ -1.41
VTA1-205ENST00000620996 C3orf84H3BNL1 204 aa6.21□□□□□ -1.41
VTA1-205ENST00000620996 NDUFC1O43677 76 aa6.21□□□□□ -1.41
VTA1-205ENST00000620996 SPACA4Q8TDM5 124 aa6.21□□□□□ -1.41
VTA1-205ENST00000620996 A8MUN3 132 aa6.21□□□□□ -1.42
VTA1-205ENST00000620996 Q6ZVQ6 151 aa6.21□□□□□ -1.42
VTA1-205ENST00000620996 TRBV7-4A0A0J9YYF1 115 aa6.2□□□□□ -1.42
VTA1-205ENST00000620996 BPY2O14599 106 aa6.2□□□□□ -1.42
VTA1-205ENST00000620996 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
VTA1-205ENST00000620996 DNAH2Q9P225 4427 aa6.19□□□□□ -1.42
VTA1-205ENST00000620996 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
VTA1-205ENST00000620996 A0A0G2JQZ4 141 aa6.18□□□□□ -1.42
VTA1-205ENST00000620996 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
VTA1-205ENST00000620996 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
VTA1-205ENST00000620996 IGLV5-48A0A075B6I7 105 aa6.17□□□□□ -1.42
VTA1-205ENST00000620996 BCE1O60756 84 aa6.17□□□□□ -1.42
VTA1-205ENST00000620996 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
VTA1-205ENST00000620996 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
VTA1-205ENST00000620996 CHKB-CPT1BH3BT56 60 aa6.15□□□□□ -1.42
VTA1-205ENST00000620996 FAM30AQ9NZY2 134 aa6.15□□□□□ -1.42
VTA1-205ENST00000620996 HECTD4Q9Y4D8 3996 aa6.15□□□□□ -1.42
VTA1-205ENST00000620996 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.43
VTA1-205ENST00000620996 PSORS1C2Q9UIG4 136 aa6.14□□□□□ -1.43
VTA1-205ENST00000620996 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
VTA1-205ENST00000620996 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
VTA1-205ENST00000620996 hDV103S1A0JD37 113 aa6.12□□□□□ -1.43
VTA1-205ENST00000620996 IGLV9-49A0A0B4J1Y8 123 aa6.11□□□□□ -1.43
VTA1-205ENST00000620996 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
VTA1-205ENST00000620996 H0Y9J4 135 aa6.1□□□□□ -1.43
VTA1-205ENST00000620996 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
VTA1-205ENST00000620996 Q8NBF4 154 aa6.1□□□□□ -1.43
VTA1-205ENST00000620996 HYDINQ4G0P3 5121 aa6.1□□□□□ -1.43
VTA1-205ENST00000620996 DNAH17Q9UFH2 4485 aa6.09□□□□□ -1.43
VTA1-205ENST00000620996 ALMS1Q8TCU4 4167 aa6.09□□□□□ -1.44
VTA1-205ENST00000620996 CIRBP-AS1Q8TBR5 109 aa6.08□□□□□ -1.44
VTA1-205ENST00000620996 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
VTA1-205ENST00000620996 HCG22E2RYF7 251 aa6.08□□□□□ -1.44
VTA1-205ENST00000620996 C8orf87E5RJ46 101 aa6.08□□□□□ -1.44
VTA1-205ENST00000620996 Q1T7F1 81 aa6.08□□□□□ -1.44
VTA1-205ENST00000620996 A0A087WSZ3 146 aa6.07□□□□□ -1.44
VTA1-205ENST00000620996 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
VTA1-205ENST00000620996 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
VTA1-205ENST00000620996 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
VTA1-205ENST00000620996 A6NED7 52 aa6.07□□□□□ -1.44
VTA1-205ENST00000620996 CXCL6P80162 114 aa6.07□□□□□ -1.44
VTA1-205ENST00000620996 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
VTA1-205ENST00000620996 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
VTA1-205ENST00000620996 ZNF861PO60384 105 aa6.05□□□□□ -1.44
VTA1-205ENST00000620996 Q5VV11 94 aa6.05□□□□□ -1.44
VTA1-205ENST00000620996 ZNF706Q9Y5V0 76 aaPredicted RBP6.05□□□□□ -1.44
VTA1-205ENST00000620996 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
VTA1-205ENST00000620996 DNAH6Q9C0G6 4158 aa6.04□□□□□ -1.44
VTA1-205ENST00000620996 SPRR1BP22528 89 aa6.03□□□□□ -1.44
VTA1-205ENST00000620996 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
VTA1-205ENST00000620996 IGLV7-43P04211 117 aa6.03□□□□□ -1.44
VTA1-205ENST00000620996 MOBPQ13875 183 aa6.03□□□□□ -1.44
VTA1-205ENST00000620996 DNAH11Q96DT5 4516 aa6.02□□□□□ -1.45
VTA1-205ENST00000620996 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
VTA1-205ENST00000620996 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
VTA1-205ENST00000620996 IGLV8-61A0A075B6I0 122 aa6.01□□□□□ -1.45
VTA1-205ENST00000620996 LCE6AA0A183 80 aa6.01□□□□□ -1.45
VTA1-205ENST00000620996 IGKV4-1P06312 121 aa6.01□□□□□ -1.45
VTA1-205ENST00000620996 LCA10Q71F78 164 aa6.01□□□□□ -1.45
VTA1-205ENST00000620996 DNAH5Q8TE73 4624 aa6.01□□□□□ -1.45
VTA1-205ENST00000620996 A0A1B0GW54 56 aa6□□□□□ -1.45
VTA1-205ENST00000620996 NDUFS5O43920 106 aa5.98□□□□□ -1.45
VTA1-205ENST00000620996 RPL37AP61513 92 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms