RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 MUSTN1Q8IVN3 82 aa6.44□□□□□ -1.38
UPF3B-204ENST00000619445 Q6JHZ5 121 aa6.42□□□□□ -1.38
UPF3B-204ENST00000619445 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
UPF3B-204ENST00000619445 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
UPF3B-204ENST00000619445 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
UPF3B-204ENST00000619445 PCP2Q8IVA1 136 aa6.41□□□□□ -1.38
UPF3B-204ENST00000619445 ATOH7Q8N100 152 aa6.4□□□□□ -1.39
UPF3B-204ENST00000619445 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
UPF3B-204ENST00000619445 MT1HP80294 61 aa6.39□□□□□ -1.39
UPF3B-204ENST00000619445 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
UPF3B-204ENST00000619445 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
UPF3B-204ENST00000619445 hADV29S1A0JD25 119 aa6.37□□□□□ -1.39
UPF3B-204ENST00000619445 CLEC2BQ92478 149 aa6.37□□□□□ -1.39
UPF3B-204ENST00000619445 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
UPF3B-204ENST00000619445 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
UPF3B-204ENST00000619445 SCGB1D1O95968 90 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 Q6ZQY7 126 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
UPF3B-204ENST00000619445 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
UPF3B-204ENST00000619445 S100A2P29034 98 aa6.34□□□□□ -1.39
UPF3B-204ENST00000619445 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.34□□□□□ -1.39
UPF3B-204ENST00000619445 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 M0R2T5 61 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 SNCGO76070 127 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 OCIAD2Q56VL3 154 aa6.33□□□□□ -1.4
UPF3B-204ENST00000619445 SNHG12Q9BXW3 62 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-204ENST00000619445 IGFL1Q6UW32 110 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 HIST1H2BLQ99880 126 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
UPF3B-204ENST00000619445 Q75L30 129 aa6.3□□□□□ -1.4
UPF3B-204ENST00000619445 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
UPF3B-204ENST00000619445 LST1O00453 97 aa6.29□□□□□ -1.4
UPF3B-204ENST00000619445 HIST1H4GQ99525 98 aa6.29□□□□□ -1.4
UPF3B-204ENST00000619445 C12orf57Q99622 126 aa6.29□□□□□ -1.4
UPF3B-204ENST00000619445 S100A6P06703 90 aa6.27□□□□□ -1.41
UPF3B-204ENST00000619445 OBSCN-AS1Q96MR7 158 aa6.27□□□□□ -1.41
UPF3B-204ENST00000619445 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
UPF3B-204ENST00000619445 Q6Q795 121 aa6.26□□□□□ -1.41
UPF3B-204ENST00000619445 H0YGX0 51 aa6.25□□□□□ -1.41
UPF3B-204ENST00000619445 DLEU1O43261 78 aa6.24□□□□□ -1.41
UPF3B-204ENST00000619445 COX8AP10176 69 aa6.23□□□□□ -1.41
UPF3B-204ENST00000619445 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
UPF3B-204ENST00000619445 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
UPF3B-204ENST00000619445 H3BUT2 72 aa6.21□□□□□ -1.41
UPF3B-204ENST00000619445 Q96NJ1 140 aa6.21□□□□□ -1.41
UPF3B-204ENST00000619445 A0A1B0GX51 115 aa6.2□□□□□ -1.42
UPF3B-204ENST00000619445 A0A0B4J2C4 111 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 S100A1P23297 94 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
UPF3B-204ENST00000619445 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 HIGD1BQ9P298 99 aa6.19□□□□□ -1.42
UPF3B-204ENST00000619445 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
UPF3B-204ENST00000619445 CFC1P0CG37 223 aa6.18□□□□□ -1.42
UPF3B-204ENST00000619445 A8MUU9 505 aa6.17□□□□□ -1.42
UPF3B-204ENST00000619445 A0A087WSZ3 146 aa6.16□□□□□ -1.42
UPF3B-204ENST00000619445 H3BMG7 143 aa6.16□□□□□ -1.42
UPF3B-204ENST00000619445 H3BQ85 93 aa6.16□□□□□ -1.42
UPF3B-204ENST00000619445 FABP2P12104 132 aa6.14□□□□□ -1.43
UPF3B-204ENST00000619445 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
UPF3B-204ENST00000619445 C14orf144Q96I85 54 aa6.13□□□□□ -1.43
UPF3B-204ENST00000619445 SPATA45Q537H7 98 aa6.12□□□□□ -1.43
UPF3B-204ENST00000619445 FAM218AQ96MZ4 157 aa6.12□□□□□ -1.43
UPF3B-204ENST00000619445 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
UPF3B-204ENST00000619445 DNAL4O96015 105 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 CEND1Q8N111 149 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 SIGMAR1Q99720 223 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 PAM16Q9Y3D7 125 aa6.11□□□□□ -1.43
UPF3B-204ENST00000619445 TRBV7-4A0A0J9YYF1 115 aa6.1□□□□□ -1.43
UPF3B-204ENST00000619445 LINC00313P59037 77 aa6.09□□□□□ -1.43
UPF3B-204ENST00000619445 ANKRD29Q8N6D5 301 aa6.09□□□□□ -1.43
UPF3B-204ENST00000619445 C2orf91Q6ZV80 131 aa6.08□□□□□ -1.44
UPF3B-204ENST00000619445 ORMDL1Q9P0S3 153 aa6.08□□□□□ -1.44
UPF3B-204ENST00000619445 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
UPF3B-204ENST00000619445 TMEM256-PLSCR3K7ERE1 68 aa6.07□□□□□ -1.44
UPF3B-204ENST00000619445 DSCR10P59022 87 aa6.07□□□□□ -1.44
UPF3B-204ENST00000619445 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 COX6CP09669 75 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 TRIAP1O43715 76 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
UPF3B-204ENST00000619445 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
UPF3B-204ENST00000619445 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
UPF3B-204ENST00000619445 PSMB2P49721 201 aa6.04□□□□□ -1.44
UPF3B-204ENST00000619445 FXYD2P54710 66 aa6.04□□□□□ -1.44
UPF3B-204ENST00000619445 TRACP01848 142 aa6.03□□□□□ -1.44
UPF3B-204ENST00000619445 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
UPF3B-204ENST00000619445 CCKP06307 115 aa6.02□□□□□ -1.45
UPF3B-204ENST00000619445 HSD52Q0P140 79 aa6.02□□□□□ -1.45
UPF3B-204ENST00000619445 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
UPF3B-204ENST00000619445 UBE2V1Q13404 147 aa6.01□□□□□ -1.45
UPF3B-204ENST00000619445 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
UPF3B-204ENST00000619445 C8orf87E5RJ46 101 aa6□□□□□ -1.45
UPF3B-204ENST00000619445 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
UPF3B-204ENST00000619445 IGHV6-1A0A0B4J1U7 121 aa5.98□□□□□ -1.45
UPF3B-204ENST00000619445 MPLKIPQ8TAP9 179 aa5.98□□□□□ -1.45
UPF3B-204ENST00000619445 C9orf118A6NHY6 69 aa5.96□□□□□ -1.45
UPF3B-204ENST00000619445 J3KT08 172 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms