RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CCL3L1P16619 93 aa2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 KCNQ1DNQ9H478 68 aa2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 IGHV3-64A0A075B6Q5 118 aa2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 IGKV3OR2-268A0A0C4DH90 116 aa2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 A0A1B0GU33 70 aa2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 TENM3Q9P273 2699 aa2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 WFDC10AQ9H1F0 79 aa2.49□□□□□ -2.01
UBE2D3-233ENST00000618836 IGKV2-29A2NJV5 120 aaPredicted RBP2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 ERHP84090 104 aaKnown RBP2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 SMIM2Q9BVW6 85 aa2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 MINOS1-NBL1R4GNA1 71 aa2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 SLPIP03973 132 aa2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 KRTAP4-5Q9BYR2 181 aa2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 NDUFA4O00483 81 aa2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 CRIP1P50238 77 aa2.48□□□□□ -2.01
UBE2D3-233ENST00000618836 IGLV4-60A0A075B6I1 120 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 UQCR11O14957 56 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 TNXBP22105 4242 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 A0A087WYN8 130 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 GAS8-AS1O95177 125 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 LINC00472Q9H8W2 130 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 KLK12Q9UKR0 248 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 CSMD3Q7Z407 3707 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 A0A087WTM6 91 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 MRGPRG-AS1Q2M3A8 158 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
UBE2D3-233ENST00000618836 COA5Q86WW8 74 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 LINC00308Q8TCZ7 52 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 H3BSH0 61 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 MGPP08493 103 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 Q6ZTI0 123 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 Q8N377 158 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 LINC00612Q8N6U2 182 aa2.46□□□□□ -2.02
UBE2D3-233ENST00000618836 A0A1W2PPR1 153 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 TACC2O95359 2948 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 TRGV4A0A0C4DH28 118 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 ETDCA0A1B0GVM5 59 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 RNF5Q99942 180 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 TLN2Q9Y4G6 2542 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 COL7A1Q02388 2944 aa2.45□□□□□ -2.02
UBE2D3-233ENST00000618836 NDUFA1O15239 70 aa2.44□□□□□ -2.02
UBE2D3-233ENST00000618836 HAMPP81172 84 aa2.44□□□□□ -2.02
UBE2D3-233ENST00000618836 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
UBE2D3-233ENST00000618836 GAFA1Q96PS6 74 aa2.44□□□□□ -2.02
UBE2D3-233ENST00000618836 TRGV2A0A075B6R0 118 aa2.44□□□□□ -2.02
UBE2D3-233ENST00000618836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.44□□□□□ -2.02
UBE2D3-233ENST00000618836 A0A096LNT2 108 aa2.44□□□□□ -2.02
UBE2D3-233ENST00000618836 ACANP16112 2415 aa2.43□□□□□ -2.02
UBE2D3-233ENST00000618836 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
UBE2D3-233ENST00000618836 CCL22O00626 93 aa2.43□□□□□ -2.02
UBE2D3-233ENST00000618836 PRR14LQ5THK1 2151 aa2.43□□□□□ -2.02
UBE2D3-233ENST00000618836 C16orf74Q96GX8 76 aa2.43□□□□□ -2.02
UBE2D3-233ENST00000618836 DIDO1Q9BTC0 2240 aaKnown RBP2.42□□□□□ -2.02
UBE2D3-233ENST00000618836 TRBV6-4A0A1B0GX49 114 aa2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 IGLV7-43P04211 117 aa2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 RPS27P42677 84 aaKnown RBP2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 DEFB112Q30KQ8 113 aa2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 PATE1Q8WXA2 126 aa2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 TNCP24821 2201 aa2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 RNASE3P12724 160 aaKnown RBP2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 SPTBN1Q01082 2364 aaKnown RBP2.41□□□□□ -2.02
UBE2D3-233ENST00000618836 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.02
UBE2D3-233ENST00000618836 NOTCH1P46531 2555 aa2.4□□□□□ -2.02
UBE2D3-233ENST00000618836 HRNRQ86YZ3 2850 aaPredicted RBP2.4□□□□□ -2.02
UBE2D3-233ENST00000618836 ALPK2Q86TB3 2170 aa2.4□□□□□ -2.03
UBE2D3-233ENST00000618836 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
UBE2D3-233ENST00000618836 ST20-AS1Q8NBB2 130 aa2.4□□□□□ -2.03
UBE2D3-233ENST00000618836 A0A0J9YWU9 116 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 DNAH5Q8TE73 4624 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 IGKV2-28A0A075B6P5 120 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 NBDYA0A0U1RRE5 68 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 M0R2N4 97 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 IGKV2D-28P01615 120 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 POLR2KP53803 58 aaKnown RBP2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 DEFB106AQ8N104 65 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 FAT1Q14517 4588 aa2.39□□□□□ -2.03
UBE2D3-233ENST00000618836 Q96NJ1 140 aa2.38□□□□□ -2.03
UBE2D3-233ENST00000618836 COX7BP24311 80 aa2.38□□□□□ -2.03
UBE2D3-233ENST00000618836 A0A1B0GVY2 172 aa2.38□□□□□ -2.03
UBE2D3-233ENST00000618836 PIGYQ3MUY2 71 aa2.38□□□□□ -2.03
UBE2D3-233ENST00000618836 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
UBE2D3-233ENST00000618836 IGKV2-40A0A087WW87 121 aaPredicted RBP2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 IGKV2D-40P01614 121 aaPredicted RBP2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 LINC00315P59091 139 aa2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 Q8N9L7 120 aa2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 CACNA1CQ13936 2221 aa2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 A0A1B0GUV1 79 aa2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 FAM168BA1KXE4 195 aa2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 PSORS1C2Q9UIG4 136 aa2.36□□□□□ -2.03
UBE2D3-233ENST00000618836 ABCA4P78363 2273 aa2.35□□□□□ -2.03
UBE2D3-233ENST00000618836 TRGV1A0A0A0MS02 117 aa2.35□□□□□ -2.03
UBE2D3-233ENST00000618836 COX17Q14061 63 aa2.35□□□□□ -2.03
UBE2D3-233ENST00000618836 KRTAP9-8Q9BYQ0 159 aa2.35□□□□□ -2.03
UBE2D3-233ENST00000618836 DEFB131BA0A096LNP1 70 aa2.35□□□□□ -2.03
UBE2D3-233ENST00000618836 LINC00158P58513 81 aa2.35□□□□□ -2.03
UBE2D3-233ENST00000618836 SPINK9Q5DT21 86 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms