RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PRO0255Q9UI72 69 aa8.06□□□□□ -1.12
MATR3-227ENST00000618441 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
MATR3-227ENST00000618441 DSCR10P59022 87 aa8.05□□□□□ -1.12
MATR3-227ENST00000618441 FBN1P35555 2871 aaKnown RBP8.04□□□□□ -1.12
MATR3-227ENST00000618441 A0A1B0GUV1 79 aa8.04□□□□□ -1.12
MATR3-227ENST00000618441 A0A096LNI7 61 aa8.04□□□□□ -1.12
MATR3-227ENST00000618441 Q8N377 158 aa8.04□□□□□ -1.12
MATR3-227ENST00000618441 CASC2Q6XLA1 102 aa8.03□□□□□ -1.12
MATR3-227ENST00000618441 ZCCHC13Q8WW36 166 aaKnown RBP8.03□□□□□ -1.12
MATR3-227ENST00000618441 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
MATR3-227ENST00000618441 SPINK7P58062 85 aa8.02□□□□□ -1.13
MATR3-227ENST00000618441 A0A087WSZ3 146 aa8.01□□□□□ -1.13
MATR3-227ENST00000618441 C7orf33Q8WU49 177 aa8□□□□□ -1.13
MATR3-227ENST00000618441 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
MATR3-227ENST00000618441 FAM229AH3BQW9 127 aa8□□□□□ -1.13
MATR3-227ENST00000618441 IGHV4-30-4P0DP06 118 aa8□□□□□ -1.13
MATR3-227ENST00000618441 GIG44P09565 113 aaPredicted RBP7.99□□□□□ -1.13
MATR3-227ENST00000618441 Q8NBF4 154 aa7.99□□□□□ -1.13
MATR3-227ENST00000618441 C4orf3Q8WVX3 66 aa7.98□□□□□ -1.13
MATR3-227ENST00000618441 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
MATR3-227ENST00000618441 DEFB135Q30KP9 77 aa7.96□□□□□ -1.14
MATR3-227ENST00000618441 LINC00476Q8WZB0 136 aa7.95□□□□□ -1.14
MATR3-227ENST00000618441 IGLV9-49A0A0B4J1Y8 123 aa7.95□□□□□ -1.14
MATR3-227ENST00000618441 IGKV2D-24A0A075B6R9 120 aa7.95□□□□□ -1.14
MATR3-227ENST00000618441 KRTAP1-1Q07627 177 aa7.94□□□□□ -1.14
MATR3-227ENST00000618441 TRRAPQ9Y4A5 3859 aa7.93□□□□□ -1.14
MATR3-227ENST00000618441 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
MATR3-227ENST00000618441 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
MATR3-227ENST00000618441 LCE6AA0A183 80 aa7.9□□□□□ -1.14
MATR3-227ENST00000618441 Q8NAQ8 132 aa7.9□□□□□ -1.14
MATR3-227ENST00000618441 KCNQ1DNQ9H478 68 aa7.89□□□□□ -1.15
MATR3-227ENST00000618441 IGLV5-48A0A075B6I7 105 aa7.88□□□□□ -1.15
MATR3-227ENST00000618441 PKD1L1Q8TDX9 2849 aa7.88□□□□□ -1.15
MATR3-227ENST00000618441 FAM168BA1KXE4 195 aa7.87□□□□□ -1.15
MATR3-227ENST00000618441 EGFEM1PQ0D2K5 195 aa7.87□□□□□ -1.15
MATR3-227ENST00000618441 CSNK1G2-AS1Q8NCQ2 148 aa7.87□□□□□ -1.15
MATR3-227ENST00000618441 DHRS4-AS1Q9P1J3 65 aa7.87□□□□□ -1.15
MATR3-227ENST00000618441 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
MATR3-227ENST00000618441 Q9BRP9 147 aa7.86□□□□□ -1.15
MATR3-227ENST00000618441 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
MATR3-227ENST00000618441 KRTAP10-3P60369 221 aa7.84□□□□□ -1.15
MATR3-227ENST00000618441 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
MATR3-227ENST00000618441 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
MATR3-227ENST00000618441 Q6ZRX8 168 aa7.83□□□□□ -1.16
MATR3-227ENST00000618441 PRLHP81277 87 aa7.82□□□□□ -1.16
MATR3-227ENST00000618441 LELP1Q5T871 98 aa7.82□□□□□ -1.16
MATR3-227ENST00000618441 IGFL1Q6UW32 110 aa7.81□□□□□ -1.16
MATR3-227ENST00000618441 CHTF8P0CG12 524 aa7.8□□□□□ -1.16
MATR3-227ENST00000618441 GVQW2A0A096LPI5 108 aaPredicted RBP7.8□□□□□ -1.16
MATR3-227ENST00000618441 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
MATR3-227ENST00000618441 AKAP9Q99996 3911 aa7.8□□□□□ -1.16
MATR3-227ENST00000618441 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
MATR3-227ENST00000618441 MIR22HGQ0VDD5 57 aa7.79□□□□□ -1.16
MATR3-227ENST00000618441 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
MATR3-227ENST00000618441 IGLV1-50A0A075B6I6 118 aa7.77□□□□□ -1.17
MATR3-227ENST00000618441 K7ERS5 55 aa7.77□□□□□ -1.17
MATR3-227ENST00000618441 UBE2DNLQ8IWF7 75 aa7.77□□□□□ -1.17
MATR3-227ENST00000618441 SPRR4Q96PI1 79 aa7.77□□□□□ -1.17
MATR3-227ENST00000618441 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
MATR3-227ENST00000618441 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
MATR3-227ENST00000618441 CNBPP62633 177 aaKnown RBP7.75□□□□□ -1.17
MATR3-227ENST00000618441 H3BPC8 53 aa7.75□□□□□ -1.17
MATR3-227ENST00000618441 TENM3Q9P273 2699 aa7.74□□□□□ -1.17
MATR3-227ENST00000618441 HRES1P13985 223 aa7.74□□□□□ -1.17
MATR3-227ENST00000618441 A0A1B0GW54 56 aa7.74□□□□□ -1.17
MATR3-227ENST00000618441 SPART-AS1P0CW21 52 aa7.73□□□□□ -1.17
MATR3-227ENST00000618441 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
MATR3-227ENST00000618441 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
MATR3-227ENST00000618441 PRR34Q9NV39 138 aa7.72□□□□□ -1.17
MATR3-227ENST00000618441 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.17
MATR3-227ENST00000618441 STAB2Q8WWQ8 2551 aa7.71□□□□□ -1.18
MATR3-227ENST00000618441 KRTAP24-1Q3LI83 254 aa7.71□□□□□ -1.18
MATR3-227ENST00000618441 A0A1B0GU69 56 aa7.7□□□□□ -1.18
MATR3-227ENST00000618441 A8MWP4 228 aa7.69□□□□□ -1.18
MATR3-227ENST00000618441 KRTAP29-1A8MX34 341 aaPredicted RBP7.68□□□□□ -1.18
MATR3-227ENST00000618441 ROMO1P60602 79 aa7.68□□□□□ -1.18
MATR3-227ENST00000618441 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
MATR3-227ENST00000618441 SRRM2Q9UQ35 2752 aaKnown RBP7.65□□□□□ -1.18
MATR3-227ENST00000618441 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
MATR3-227ENST00000618441 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
MATR3-227ENST00000618441 IGLV5-37A0A075B6J1 123 aa7.62□□□□□ -1.19
MATR3-227ENST00000618441 Q6ZR54 194 aa7.62□□□□□ -1.19
MATR3-227ENST00000618441 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
MATR3-227ENST00000618441 K7EIL1 84 aa7.61□□□□□ -1.19
MATR3-227ENST00000618441 TENM2Q9NT68 2774 aa7.61□□□□□ -1.19
MATR3-227ENST00000618441 DEFB131BA0A096LNP1 70 aa7.6□□□□□ -1.19
MATR3-227ENST00000618441 MMP24-AS1A0A0U1RRL7 71 aa7.59□□□□□ -1.19
MATR3-227ENST00000618441 CASC10Q5T4H9 136 aa7.59□□□□□ -1.19
MATR3-227ENST00000618441 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
MATR3-227ENST00000618441 SPINK1P00995 79 aa7.56□□□□□ -1.2
MATR3-227ENST00000618441 KRTAP10-11P60412 298 aa7.55□□□□□ -1.2
MATR3-227ENST00000618441 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
MATR3-227ENST00000618441 UQCR11O14957 56 aa7.55□□□□□ -1.2
MATR3-227ENST00000618441 ACYP2P14621 99 aa7.55□□□□□ -1.2
MATR3-227ENST00000618441 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
MATR3-227ENST00000618441 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
MATR3-227ENST00000618441 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
MATR3-227ENST00000618441 LINC00472Q9H8W2 130 aa7.53□□□□□ -1.2
MATR3-227ENST00000618441 SPRR1AP35321 89 aa7.51□□□□□ -1.21
MATR3-227ENST00000618441 KRTAP26-1Q6PEX3 210 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms