RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 BAHCC1Q9P281 2608 aa7.75□□□□□ -1.17
TCF4-248ENST00000616053 A0A0C4DFX4 3053 aa7.75□□□□□ -1.17
TCF4-248ENST00000616053 PRO0461Q9UI25 63 aa7.72□□□□□ -1.17
TCF4-248ENST00000616053 CFAP46Q8IYW2 2715 aa7.72□□□□□ -1.17
TCF4-248ENST00000616053 LAMA2P24043 3122 aaKnown RBP7.72□□□□□ -1.17
TCF4-248ENST00000616053 STAB2Q8WWQ8 2551 aa7.71□□□□□ -1.18
TCF4-248ENST00000616053 CEP350Q5VT06 3117 aa7.7□□□□□ -1.18
TCF4-248ENST00000616053 Q5W150 140 aa7.7□□□□□ -1.18
TCF4-248ENST00000616053 C5orf42Q9H799 3197 aa7.7□□□□□ -1.18
TCF4-248ENST00000616053 P0C880 135 aa7.68□□□□□ -1.18
TCF4-248ENST00000616053 KLK9Q2XQG4 91 aa7.68□□□□□ -1.18
TCF4-248ENST00000616053 Q8NDZ9 215 aa7.67□□□□□ -1.18
TCF4-248ENST00000616053 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
TCF4-248ENST00000616053 H3BS24 57 aa7.65□□□□□ -1.18
TCF4-248ENST00000616053 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
TCF4-248ENST00000616053 SPRR1BP22528 89 aa7.65□□□□□ -1.19
TCF4-248ENST00000616053 KRTAP10-1P60331 282 aa7.64□□□□□ -1.19
TCF4-248ENST00000616053 Q75L30 129 aa7.64□□□□□ -1.19
TCF4-248ENST00000616053 CFAP54Q96N23 3096 aa7.64□□□□□ -1.19
TCF4-248ENST00000616053 EIF4EBP3O60516 100 aaPredicted RBP7.61□□□□□ -1.19
TCF4-248ENST00000616053 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
TCF4-248ENST00000616053 SETXQ7Z333 2677 aaKnown RBP7.59□□□□□ -1.19
TCF4-248ENST00000616053 A8MUU9 505 aa7.59□□□□□ -1.19
TCF4-248ENST00000616053 CHD6Q8TD26 2715 aa7.58□□□□□ -1.2
TCF4-248ENST00000616053 KMT2BQ9UMN6 2715 aaPredicted RBP7.58□□□□□ -1.2
TCF4-248ENST00000616053 NBEAL1Q6ZS30 2694 aa7.58□□□□□ -1.2
TCF4-248ENST00000616053 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
TCF4-248ENST00000616053 KRTAP10-2P60368 255 aa7.56□□□□□ -1.2
TCF4-248ENST00000616053 ITPR3Q14573 2671 aa7.55□□□□□ -1.2
TCF4-248ENST00000616053 A0A096LNT2 108 aa7.55□□□□□ -1.2
TCF4-248ENST00000616053 PANO1I0J062 215 aa7.55□□□□□ -1.2
TCF4-248ENST00000616053 TNP1P09430 55 aa7.54□□□□□ -1.2
TCF4-248ENST00000616053 OCR1Q9BZK8 76 aa7.53□□□□□ -1.2
TCF4-248ENST00000616053 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
TCF4-248ENST00000616053 MAP1AP78559 2803 aaPredicted RBP7.48□□□□□ -1.21
TCF4-248ENST00000616053 NOTCH1P46531 2555 aa7.48□□□□□ -1.21
TCF4-248ENST00000616053 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
TCF4-248ENST00000616053 KRTAP1-3Q8IUG1 177 aa7.48□□□□□ -1.21
TCF4-248ENST00000616053 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
TCF4-248ENST00000616053 MGAQ8IWI9 3026 aa7.46□□□□□ -1.21
TCF4-248ENST00000616053 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
TCF4-248ENST00000616053 HELZ2Q9BYK8 2649 aaKnown RBP7.45□□□□□ -1.22
TCF4-248ENST00000616053 DSPP15924 2871 aaKnown RBP7.44□□□□□ -1.22
TCF4-248ENST00000616053 Q6ZR54 194 aa7.43□□□□□ -1.22
TCF4-248ENST00000616053 XIRP2A4UGR9 3374 aa7.41□□□□□ -1.22
TCF4-248ENST00000616053 HTTP42858 3142 aa7.38□□□□□ -1.23
TCF4-248ENST00000616053 GCN1Q92616 2671 aaKnown RBP7.38□□□□□ -1.23
TCF4-248ENST00000616053 COL6A5A8TX70 2615 aa7.37□□□□□ -1.23
TCF4-248ENST00000616053 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
TCF4-248ENST00000616053 UTP20O75691 2785 aaKnown RBP7.37□□□□□ -1.23
TCF4-248ENST00000616053 APCP25054 2843 aa7.36□□□□□ -1.23
TCF4-248ENST00000616053 CHD7Q9P2D1 2997 aa7.33□□□□□ -1.24
TCF4-248ENST00000616053 UNC79Q9P2D8 2635 aa7.33□□□□□ -1.24
TCF4-248ENST00000616053 FLNAP21333 2647 aaKnown RBP7.33□□□□□ -1.24
TCF4-248ENST00000616053 ITPR1Q14643 2758 aa7.32□□□□□ -1.24
TCF4-248ENST00000616053 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
TCF4-248ENST00000616053 VPS13AQ96RL7 3174 aa7.32□□□□□ -1.24
TCF4-248ENST00000616053 RANBP2P49792 3224 aaKnown RBP7.32□□□□□ -1.24
TCF4-248ENST00000616053 KRTAP1-5Q9BYS1 174 aa7.3□□□□□ -1.24
TCF4-248ENST00000616053 TRANK1O15050 2925 aa7.3□□□□□ -1.24
TCF4-248ENST00000616053 FRYLO94915 3013 aa7.3□□□□□ -1.24
TCF4-248ENST00000616053 BRCA2P51587 3418 aa7.29□□□□□ -1.24
TCF4-248ENST00000616053 Q5VV11 94 aa7.29□□□□□ -1.24
TCF4-248ENST00000616053 KRTAP26-1Q6PEX3 210 aa7.28□□□□□ -1.24
TCF4-248ENST00000616053 SPRR1AP35321 89 aa7.28□□□□□ -1.24
TCF4-248ENST00000616053 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
TCF4-248ENST00000616053 A0A087X002 238 aa7.27□□□□□ -1.25
TCF4-248ENST00000616053 MKI67P46013 3256 aaKnown RBP7.27□□□□□ -1.25
TCF4-248ENST00000616053 TEX15Q9BXT5 2789 aa7.26□□□□□ -1.25
TCF4-248ENST00000616053 TEP1Q99973 2627 aaKnown RBP7.26□□□□□ -1.25
TCF4-248ENST00000616053 TRIOO75962 3097 aa7.26□□□□□ -1.25
TCF4-248ENST00000616053 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
TCF4-248ENST00000616053 FREM2Q5SZK8 3169 aa7.22□□□□□ -1.25
TCF4-248ENST00000616053 CHD9Q3L8U1 2897 aa7.22□□□□□ -1.25
TCF4-248ENST00000616053 KALRNO60229 2985 aa7.2□□□□□ -1.26
TCF4-248ENST00000616053 A8MU10 97 aa7.19□□□□□ -1.26
TCF4-248ENST00000616053 NSD1Q96L73 2696 aaPredicted RBP7.19□□□□□ -1.26
TCF4-248ENST00000616053 ASH1LQ9NR48 2969 aaKnown RBP7.18□□□□□ -1.26
TCF4-248ENST00000616053 CELSR3Q9NYQ7 3312 aa7.18□□□□□ -1.26
TCF4-248ENST00000616053 UBR5O95071 2799 aaPredicted RBP7.18□□□□□ -1.26
TCF4-248ENST00000616053 LAMA3Q16787 3333 aa7.17□□□□□ -1.26
TCF4-248ENST00000616053 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
TCF4-248ENST00000616053 LRBAP50851 2863 aa7.16□□□□□ -1.26
TCF4-248ENST00000616053 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
TCF4-248ENST00000616053 FRYQ5TBA9 3013 aa7.16□□□□□ -1.26
TCF4-248ENST00000616053 ITPR2Q14571 2701 aa7.14□□□□□ -1.27
TCF4-248ENST00000616053 IGSF10Q6WRI0 2623 aa7.11□□□□□ -1.27
TCF4-248ENST00000616053 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
TCF4-248ENST00000616053 DNAH14Q0VDD8 3507 aa7.1□□□□□ -1.27
TCF4-248ENST00000616053 TACC2O95359 2948 aa7.08□□□□□ -1.28
TCF4-248ENST00000616053 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
TCF4-248ENST00000616053 UNC80Q8N2C7 3258 aa7.06□□□□□ -1.28
TCF4-248ENST00000616053 ZNF292O60281 2723 aa7.06□□□□□ -1.28
TCF4-248ENST00000616053 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
TCF4-248ENST00000616053 PRUNE2Q8WUY3 3088 aa7.05□□□□□ -1.28
TCF4-248ENST00000616053 CDH23Q9H251 3354 aa7.02□□□□□ -1.29
TCF4-248ENST00000616053 KRTAP4-16G5E9R7 235 aaPredicted RBP7.02□□□□□ -1.29
TCF4-248ENST00000616053 WDFY4Q6ZS81 3184 aa6.99□□□□□ -1.29
TCF4-248ENST00000616053 NOTCH2NLQ7Z3S9 236 aa6.98□□□□□ -1.29
TCF4-248ENST00000616053 LAMA1P25391 3075 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms