RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 Q6ZQY7 126 aa8.11□□□□□ -1.11
HDDC2-209ENST00000609477 H7C2G1 150 aa8.1□□□□□ -1.11
HDDC2-209ENST00000609477 FXYD2P54710 66 aa8.1□□□□□ -1.11
HDDC2-209ENST00000609477 LIMD2Q9BT23 127 aa8.1□□□□□ -1.11
HDDC2-209ENST00000609477 LPAP08519 4548 aa8.1□□□□□ -1.11
HDDC2-209ENST00000609477 OCIAD2Q56VL3 154 aa8.09□□□□□ -1.11
HDDC2-209ENST00000609477 A0A1B0GX51 115 aa8.08□□□□□ -1.12
HDDC2-209ENST00000609477 F8WEM9 126 aa8.08□□□□□ -1.12
HDDC2-209ENST00000609477 GHRHP01286 108 aa8.07□□□□□ -1.12
HDDC2-209ENST00000609477 Q5XG85 94 aa8.06□□□□□ -1.12
HDDC2-209ENST00000609477 Q6JHZ5 121 aa8.05□□□□□ -1.12
HDDC2-209ENST00000609477 CDIP1Q9H305 208 aa8.05□□□□□ -1.12
HDDC2-209ENST00000609477 IGLV8-61A0A075B6I0 122 aa8.04□□□□□ -1.12
HDDC2-209ENST00000609477 SMIM6P0DI80 62 aa8.04□□□□□ -1.12
HDDC2-209ENST00000609477 SNHG12Q9BXW3 62 aa8.03□□□□□ -1.12
HDDC2-209ENST00000609477 HRCT1Q6UXD1 115 aa8.02□□□□□ -1.13
HDDC2-209ENST00000609477 TRIAP1O43715 76 aa8.01□□□□□ -1.13
HDDC2-209ENST00000609477 COX6CP09669 75 aa8.01□□□□□ -1.13
HDDC2-209ENST00000609477 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
HDDC2-209ENST00000609477 FAM218AQ96MZ4 157 aa8□□□□□ -1.13
HDDC2-209ENST00000609477 H3BQ85 93 aa7.99□□□□□ -1.13
HDDC2-209ENST00000609477 CLEC2BQ92478 149 aa7.99□□□□□ -1.13
HDDC2-209ENST00000609477 PSMB2P49721 201 aa7.98□□□□□ -1.13
HDDC2-209ENST00000609477 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
HDDC2-209ENST00000609477 K7ERJ3 54 aa7.97□□□□□ -1.13
HDDC2-209ENST00000609477 TCL1BO95988 128 aa7.97□□□□□ -1.13
HDDC2-209ENST00000609477 DNAL4O96015 105 aa7.96□□□□□ -1.14
HDDC2-209ENST00000609477 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
HDDC2-209ENST00000609477 M0R143 59 aa7.95□□□□□ -1.14
HDDC2-209ENST00000609477 NDUFV3P56181 108 aaKnown RBP7.95□□□□□ -1.14
HDDC2-209ENST00000609477 A0A0G2JQZ4 141 aa7.94□□□□□ -1.14
HDDC2-209ENST00000609477 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
HDDC2-209ENST00000609477 TRBV7-7A0A0K0K1E9 115 aa7.93□□□□□ -1.14
HDDC2-209ENST00000609477 TSTD3H0UI37 97 aa7.92□□□□□ -1.14
HDDC2-209ENST00000609477 C1orf195Q5TG92 126 aa7.92□□□□□ -1.14
HDDC2-209ENST00000609477 Q6Q795 121 aa7.92□□□□□ -1.14
HDDC2-209ENST00000609477 ORMDL1Q9P0S3 153 aa7.92□□□□□ -1.14
HDDC2-209ENST00000609477 TMEM256-PLSCR3K7ERE1 68 aa7.91□□□□□ -1.14
HDDC2-209ENST00000609477 FABP2P12104 132 aa7.91□□□□□ -1.14
HDDC2-209ENST00000609477 LOC105371267A0A1B0GV96 52 aa7.9□□□□□ -1.14
HDDC2-209ENST00000609477 H3BMG7 143 aa7.9□□□□□ -1.14
HDDC2-209ENST00000609477 TRACP01848 142 aa7.9□□□□□ -1.14
HDDC2-209ENST00000609477 SCGB1C2P0DMR2 95 aa7.9□□□□□ -1.14
HDDC2-209ENST00000609477 H3BUT2 72 aa7.89□□□□□ -1.15
HDDC2-209ENST00000609477 TEN1Q86WV5 123 aa7.89□□□□□ -1.15
HDDC2-209ENST00000609477 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
HDDC2-209ENST00000609477 XP32Q5T750 250 aa7.88□□□□□ -1.15
HDDC2-209ENST00000609477 LST1O00453 97 aa7.87□□□□□ -1.15
HDDC2-209ENST00000609477 SS18L2Q9UHA2 77 aa7.87□□□□□ -1.15
HDDC2-209ENST00000609477 A0A0U1RQV1 116 aa7.86□□□□□ -1.15
HDDC2-209ENST00000609477 UBE2V1Q13404 147 aa7.86□□□□□ -1.15
HDDC2-209ENST00000609477 MUC2Q02817 5179 aa7.82□□□□□ -1.16
HDDC2-209ENST00000609477 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
HDDC2-209ENST00000609477 MUC17Q685J3 4493 aa7.81□□□□□ -1.16
HDDC2-209ENST00000609477 TRBV7-4A0A0J9YYF1 115 aa7.8□□□□□ -1.16
HDDC2-209ENST00000609477 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
HDDC2-209ENST00000609477 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
HDDC2-209ENST00000609477 ATXN8Q156A1 80 aa7.79□□□□□ -1.16
HDDC2-209ENST00000609477 A0A087WSZ3 146 aa7.77□□□□□ -1.17
HDDC2-209ENST00000609477 A0A1W2PNM2 257 aa7.77□□□□□ -1.17
HDDC2-209ENST00000609477 BAALC-AS2P0C853 105 aa7.77□□□□□ -1.17
HDDC2-209ENST00000609477 TRBV20-1A0A075B6N2 111 aa7.76□□□□□ -1.17
HDDC2-209ENST00000609477 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
HDDC2-209ENST00000609477 DSCR8Q96T75 97 aa7.75□□□□□ -1.17
HDDC2-209ENST00000609477 CCKP06307 115 aa7.74□□□□□ -1.17
HDDC2-209ENST00000609477 BATFQ16520 125 aa7.74□□□□□ -1.17
HDDC2-209ENST00000609477 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
HDDC2-209ENST00000609477 JMJD7-PLA2G4BH0Y9G9 81 aa7.72□□□□□ -1.17
HDDC2-209ENST00000609477 NAA38Q9BRA0 125 aaKnown RBP7.72□□□□□ -1.17
HDDC2-209ENST00000609477 Q96NJ1 140 aa7.71□□□□□ -1.18
HDDC2-209ENST00000609477 A0A1B0GV72 72 aa7.7□□□□□ -1.18
HDDC2-209ENST00000609477 C9orf118A6NHY6 69 aa7.7□□□□□ -1.18
HDDC2-209ENST00000609477 C9JAW5 83 aa7.7□□□□□ -1.18
HDDC2-209ENST00000609477 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
HDDC2-209ENST00000609477 A0A1B0GW54 56 aa7.69□□□□□ -1.18
HDDC2-209ENST00000609477 PDE6GP18545 87 aa7.68□□□□□ -1.18
HDDC2-209ENST00000609477 PCOTHQ58A44 107 aa7.68□□□□□ -1.18
HDDC2-209ENST00000609477 OBSCN-AS1Q96MR7 158 aa7.67□□□□□ -1.18
HDDC2-209ENST00000609477 TAX1BP3O14907 124 aa7.66□□□□□ -1.18
HDDC2-209ENST00000609477 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
HDDC2-209ENST00000609477 LOC110117498A0A087WWA1 95 aa7.65□□□□□ -1.18
HDDC2-209ENST00000609477 A0A1W2PPM0 123 aa7.65□□□□□ -1.18
HDDC2-209ENST00000609477 Q75L30 129 aa7.65□□□□□ -1.18
HDDC2-209ENST00000609477 LINC00472Q9H8W2 130 aa7.65□□□□□ -1.18
HDDC2-209ENST00000609477 VPS25Q9BRG1 176 aa7.64□□□□□ -1.19
HDDC2-209ENST00000609477 IGKV4-1P06312 121 aa7.63□□□□□ -1.19
HDDC2-209ENST00000609477 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
HDDC2-209ENST00000609477 H3BT86 120 aa7.62□□□□□ -1.19
HDDC2-209ENST00000609477 Q6ZQT0 140 aa7.62□□□□□ -1.19
HDDC2-209ENST00000609477 ATP11AUNQ6ZP68 121 aa7.61□□□□□ -1.19
HDDC2-209ENST00000609477 J3KT08 172 aa7.6□□□□□ -1.19
HDDC2-209ENST00000609477 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
HDDC2-209ENST00000609477 LINC00313P59037 77 aa7.59□□□□□ -1.19
HDDC2-209ENST00000609477 COL5A1-AS1Q5SY13 56 aa7.59□□□□□ -1.19
HDDC2-209ENST00000609477 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
HDDC2-209ENST00000609477 A8MUU9 505 aa7.58□□□□□ -1.2
HDDC2-209ENST00000609477 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
HDDC2-209ENST00000609477 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
HDDC2-209ENST00000609477 DSCR10P59022 87 aa7.55□□□□□ -1.2
HDDC2-209ENST00000609477 DEFB116Q30KQ4 102 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms