RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 SNCGO76070 127 aa10.82□□□□□ -0.68
SRSF4-206ENST00000605204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.82□□□□□ -0.68
SRSF4-206ENST00000605204 CEND1Q8N111 149 aa10.82□□□□□ -0.68
SRSF4-206ENST00000605204 PPDPFLQ8WWR9 84 aa10.82□□□□□ -0.68
SRSF4-206ENST00000605204 MUC17Q685J3 4493 aa10.81□□□□□ -0.68
SRSF4-206ENST00000605204 H7C2G1 150 aa10.81□□□□□ -0.68
SRSF4-206ENST00000605204 Q6ZQY7 126 aa10.81□□□□□ -0.68
SRSF4-206ENST00000605204 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
SRSF4-206ENST00000605204 H0YGX0 51 aa10.78□□□□□ -0.68
SRSF4-206ENST00000605204 Q5XG85 94 aa10.77□□□□□ -0.68
SRSF4-206ENST00000605204 HRCT1Q6UXD1 115 aa10.77□□□□□ -0.69
SRSF4-206ENST00000605204 PRO1854Q9UHT4 67 aa10.77□□□□□ -0.69
SRSF4-206ENST00000605204 HSD52Q0P140 79 aa10.76□□□□□ -0.69
SRSF4-206ENST00000605204 OCIAD2Q56VL3 154 aa10.76□□□□□ -0.69
SRSF4-206ENST00000605204 LCE2AQ5TA79 106 aaPredicted RBP10.76□□□□□ -0.69
SRSF4-206ENST00000605204 Q6JHZ5 121 aa10.75□□□□□ -0.69
SRSF4-206ENST00000605204 A0A0U1RQV1 116 aa10.73□□□□□ -0.69
SRSF4-206ENST00000605204 GHRHP01286 108 aa10.73□□□□□ -0.69
SRSF4-206ENST00000605204 UQCR10Q9UDW1 63 aa10.73□□□□□ -0.69
SRSF4-206ENST00000605204 IGLV8-61A0A075B6I0 122 aa10.72□□□□□ -0.69
SRSF4-206ENST00000605204 A0A1B0GX51 115 aa10.72□□□□□ -0.69
SRSF4-206ENST00000605204 FXYD2P54710 66 aa10.72□□□□□ -0.69
SRSF4-206ENST00000605204 CLEC2BQ92478 149 aa10.7□□□□□ -0.7
SRSF4-206ENST00000605204 SNHG12Q9BXW3 62 aa10.7□□□□□ -0.7
SRSF4-206ENST00000605204 TCL1BO95988 128 aa10.68□□□□□ -0.7
SRSF4-206ENST00000605204 SEC61BP60468 96 aaKnown RBP10.65□□□□□ -0.71
SRSF4-206ENST00000605204 ASB16-AS1Q495Z4 193 aa10.64□□□□□ -0.71
SRSF4-206ENST00000605204 TRIAP1O43715 76 aa10.63□□□□□ -0.71
SRSF4-206ENST00000605204 XP32Q5T750 250 aa10.63□□□□□ -0.71
SRSF4-206ENST00000605204 IGFL1Q6UW32 110 aa10.63□□□□□ -0.71
SRSF4-206ENST00000605204 FAM218AQ96MZ4 157 aa10.63□□□□□ -0.71
SRSF4-206ENST00000605204 A0A0G2JQZ4 141 aa10.62□□□□□ -0.71
SRSF4-206ENST00000605204 COX6CP09669 75 aa10.62□□□□□ -0.71
SRSF4-206ENST00000605204 C1orf195Q5TG92 126 aa10.61□□□□□ -0.71
SRSF4-206ENST00000605204 TRBV7-7A0A0K0K1E9 115 aa10.6□□□□□ -0.71
SRSF4-206ENST00000605204 H3BQ85 93 aa10.6□□□□□ -0.71
SRSF4-206ENST00000605204 PSMB2P49721 201 aa10.59□□□□□ -0.71
SRSF4-206ENST00000605204 KRTAP9-6A0A140TA67 174 aa10.58□□□□□ -0.72
SRSF4-206ENST00000605204 DNAL4O96015 105 aa10.58□□□□□ -0.72
SRSF4-206ENST00000605204 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
SRSF4-206ENST00000605204 K7ERJ3 54 aa10.57□□□□□ -0.72
SRSF4-206ENST00000605204 H3BUT2 72 aa10.55□□□□□ -0.72
SRSF4-206ENST00000605204 SMIM6P0DI80 62 aa10.55□□□□□ -0.72
SRSF4-206ENST00000605204 Q6Q795 121 aa10.55□□□□□ -0.72
SRSF4-206ENST00000605204 FABP2P12104 132 aa10.53□□□□□ -0.72
SRSF4-206ENST00000605204 SS18L2Q9UHA2 77 aa10.53□□□□□ -0.72
SRSF4-206ENST00000605204 ORMDL1Q9P0S3 153 aa10.52□□□□□ -0.72
SRSF4-206ENST00000605204 H3BMG7 143 aa10.51□□□□□ -0.73
SRSF4-206ENST00000605204 M0R143 59 aa10.51□□□□□ -0.73
SRSF4-206ENST00000605204 TEN1Q86WV5 123 aa10.51□□□□□ -0.73
SRSF4-206ENST00000605204 C9orf92A6NGG3 77 aa10.5□□□□□ -0.73
SRSF4-206ENST00000605204 TMEM256-PLSCR3K7ERE1 68 aa10.49□□□□□ -0.73
SRSF4-206ENST00000605204 LST1O00453 97 aa10.46□□□□□ -0.74
SRSF4-206ENST00000605204 TRACP01848 142 aa10.46□□□□□ -0.74
SRSF4-206ENST00000605204 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
SRSF4-206ENST00000605204 UBE2V1Q13404 147 aa10.42□□□□□ -0.74
SRSF4-206ENST00000605204 TSTD3H0UI37 97 aa10.4□□□□□ -0.74
SRSF4-206ENST00000605204 A0A087WSZ3 146 aa10.39□□□□□ -0.75
SRSF4-206ENST00000605204 ANKRD29Q8N6D5 301 aa10.39□□□□□ -0.75
SRSF4-206ENST00000605204 TRBV7-4A0A0J9YYF1 115 aa10.39□□□□□ -0.75
SRSF4-206ENST00000605204 RPL37P61927 97 aaKnown RBP10.38□□□□□ -0.75
SRSF4-206ENST00000605204 PCOTHQ58A44 107 aa10.37□□□□□ -0.75
SRSF4-206ENST00000605204 KRTAP4-1Q9BYQ7 146 aa10.36□□□□□ -0.75
SRSF4-206ENST00000605204 A0A1W2PNM2 257 aa10.35□□□□□ -0.75
SRSF4-206ENST00000605204 LYRM7Q5U5X0 104 aa10.33□□□□□ -0.76
SRSF4-206ENST00000605204 ATXN8Q156A1 80 aa10.31□□□□□ -0.76
SRSF4-206ENST00000605204 CCKP06307 115 aa10.3□□□□□ -0.76
SRSF4-206ENST00000605204 RBM3P98179 157 aaKnown RBP10.3□□□□□ -0.76
SRSF4-206ENST00000605204 OBSCN-AS1Q96MR7 158 aa10.3□□□□□ -0.76
SRSF4-206ENST00000605204 DSCR8Q96T75 97 aa10.29□□□□□ -0.76
SRSF4-206ENST00000605204 A0A1B0GV72 72 aa10.28□□□□□ -0.76
SRSF4-206ENST00000605204 C21orf62-AS1Q17RA5 79 aa10.28□□□□□ -0.76
SRSF4-206ENST00000605204 LOC105371267A0A1B0GV96 52 aa10.27□□□□□ -0.76
SRSF4-206ENST00000605204 BAALC-AS2P0C853 105 aa10.27□□□□□ -0.76
SRSF4-206ENST00000605204 Q75L30 129 aa10.27□□□□□ -0.76
SRSF4-206ENST00000605204 Q96NJ1 140 aa10.27□□□□□ -0.76
SRSF4-206ENST00000605204 FSIP2Q5CZC0 6907 aa10.25□□□□□ -0.77
SRSF4-206ENST00000605204 TRBV20-1A0A075B6N2 111 aa10.25□□□□□ -0.77
SRSF4-206ENST00000605204 SIGMAR1Q99720 223 aa10.24□□□□□ -0.77
SRSF4-206ENST00000605204 C9JAW5 83 aa10.22□□□□□ -0.77
SRSF4-206ENST00000605204 JMJD7-PLA2G4BH0Y9G9 81 aa10.22□□□□□ -0.77
SRSF4-206ENST00000605204 LCE2DQ5TA82 110 aaPredicted RBP10.22□□□□□ -0.77
SRSF4-206ENST00000605204 ATP11AUNQ6ZP68 121 aa10.22□□□□□ -0.77
SRSF4-206ENST00000605204 NAA38Q9BRA0 125 aaKnown RBP10.22□□□□□ -0.77
SRSF4-206ENST00000605204 BATFQ16520 125 aa10.21□□□□□ -0.78
SRSF4-206ENST00000605204 IGKV4-1P06312 121 aa10.2□□□□□ -0.78
SRSF4-206ENST00000605204 C20orf166-AS1Q96NR2 134 aa10.19□□□□□ -0.78
SRSF4-206ENST00000605204 VPS25Q9BRG1 176 aa10.19□□□□□ -0.78
SRSF4-206ENST00000605204 A0A1B0GW54 56 aa10.18□□□□□ -0.78
SRSF4-206ENST00000605204 PDE6GP18545 87 aa10.18□□□□□ -0.78
SRSF4-206ENST00000605204 LINC00472Q9H8W2 130 aa10.18□□□□□ -0.78
SRSF4-206ENST00000605204 LOC110117498A0A087WWA1 95 aa10.14□□□□□ -0.79
SRSF4-206ENST00000605204 A8MUU9 505 aa10.14□□□□□ -0.79
SRSF4-206ENST00000605204 LCE2CQ5TA81 110 aa10.14□□□□□ -0.79
SRSF4-206ENST00000605204 LINC00313P59037 77 aa10.14□□□□□ -0.79
SRSF4-206ENST00000605204 CRCT1Q9UGL9 99 aa10.14□□□□□ -0.79
SRSF4-206ENST00000605204 C9orf118A6NHY6 69 aa10.13□□□□□ -0.79
SRSF4-206ENST00000605204 J3KT08 172 aa10.13□□□□□ -0.79
SRSF4-206ENST00000605204 DSCR10P59022 87 aa10.11□□□□□ -0.79
SRSF4-206ENST00000605204 KRTAP19-2Q3LHN2 52 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms