RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 HIST1H2BCP62807 126 aa8.56□□□□□ -1.04
CCDC12-210ENST00000604181 HIST2H2BEQ16778 126 aa8.56□□□□□ -1.04
CCDC12-210ENST00000604181 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.56□□□□□ -1.04
CCDC12-210ENST00000604181 HIST1H2BHQ93079 126 aa8.56□□□□□ -1.04
CCDC12-210ENST00000604181 HIST1H2BNQ99877 126 aa8.56□□□□□ -1.04
CCDC12-210ENST00000604181 HIST1H2BMQ99879 126 aa8.56□□□□□ -1.04
CCDC12-210ENST00000604181 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
CCDC12-210ENST00000604181 LCE2BO14633 110 aa8.55□□□□□ -1.04
CCDC12-210ENST00000604181 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
CCDC12-210ENST00000604181 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
CCDC12-210ENST00000604181 C20orf202A1L168 122 aa8.53□□□□□ -1.04
CCDC12-210ENST00000604181 Q6JHZ5 121 aa8.53□□□□□ -1.04
CCDC12-210ENST00000604181 LINC00575Q6W349 94 aa8.53□□□□□ -1.04
CCDC12-210ENST00000604181 Q6ZQY7 126 aa8.53□□□□□ -1.04
CCDC12-210ENST00000604181 Q96NJ1 140 aa8.53□□□□□ -1.04
CCDC12-210ENST00000604181 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.05
CCDC12-210ENST00000604181 OCIAD2Q56VL3 154 aa8.51□□□□□ -1.05
CCDC12-210ENST00000604181 Q6ZVH6 145 aa8.51□□□□□ -1.05
CCDC12-210ENST00000604181 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
CCDC12-210ENST00000604181 C20orf166-AS1Q96NR2 134 aa8.51□□□□□ -1.05
CCDC12-210ENST00000604181 MT1FP04733 61 aa8.5□□□□□ -1.05
CCDC12-210ENST00000604181 SLC7A5P1Q8MH63 180 aa8.5□□□□□ -1.05
CCDC12-210ENST00000604181 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
CCDC12-210ENST00000604181 MACF1Q9UPN3 7388 aaKnown RBP8.49□□□□□ -1.05
CCDC12-210ENST00000604181 KRTDAPP60985 99 aa8.49□□□□□ -1.05
CCDC12-210ENST00000604181 hADV29S1A0JD25 119 aa8.48□□□□□ -1.05
CCDC12-210ENST00000604181 A8MUU9 505 aa8.48□□□□□ -1.05
CCDC12-210ENST00000604181 KRTAP9-3Q9BYQ3 159 aa8.47□□□□□ -1.05
CCDC12-210ENST00000604181 H3BUT2 72 aa8.46□□□□□ -1.06
CCDC12-210ENST00000604181 LST1O00453 97 aa8.46□□□□□ -1.06
CCDC12-210ENST00000604181 SYNE2Q8WXH0 6885 aaKnown RBP8.46□□□□□ -1.06
CCDC12-210ENST00000604181 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
CCDC12-210ENST00000604181 VAMP3Q15836 100 aa8.44□□□□□ -1.06
CCDC12-210ENST00000604181 TRBV20-1A0A075B6N2 111 aa8.42□□□□□ -1.06
CCDC12-210ENST00000604181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.06
CCDC12-210ENST00000604181 COA6Q5JTJ3 125 aaKnown RBP8.39□□□□□ -1.07
CCDC12-210ENST00000604181 DSCR10P59022 87 aa8.38□□□□□ -1.07
CCDC12-210ENST00000604181 KRTAP10-10P60014 251 aa8.37□□□□□ -1.07
CCDC12-210ENST00000604181 SNHG12Q9BXW3 62 aa8.37□□□□□ -1.07
CCDC12-210ENST00000604181 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
CCDC12-210ENST00000604181 PPDPFLQ8WWR9 84 aa8.35□□□□□ -1.07
CCDC12-210ENST00000604181 FAM236DA0A1B0GTK5 79 aa8.34□□□□□ -1.07
CCDC12-210ENST00000604181 FAM236CP0DP71 79 aa8.34□□□□□ -1.07
CCDC12-210ENST00000604181 HRES1P13985 223 aa8.34□□□□□ -1.07
CCDC12-210ENST00000604181 C12orf57Q99622 126 aa8.34□□□□□ -1.07
CCDC12-210ENST00000604181 SS18L2Q9UHA2 77 aa8.33□□□□□ -1.08
CCDC12-210ENST00000604181 A0A087WSZ3 146 aa8.32□□□□□ -1.08
CCDC12-210ENST00000604181 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
CCDC12-210ENST00000604181 TEN1Q86WV5 123 aa8.3□□□□□ -1.08
CCDC12-210ENST00000604181 BVES-AS1Q5T3Y7 98 aa8.28□□□□□ -1.08
CCDC12-210ENST00000604181 NOTCH2NLQ7Z3S9 236 aa8.27□□□□□ -1.09
CCDC12-210ENST00000604181 NDUFV3P56181 108 aaKnown RBP8.26□□□□□ -1.09
CCDC12-210ENST00000604181 KRTAP19-6Q3LI70 58 aa8.26□□□□□ -1.09
CCDC12-210ENST00000604181 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
CCDC12-210ENST00000604181 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
CCDC12-210ENST00000604181 SIGMAR1Q99720 223 aa8.25□□□□□ -1.09
CCDC12-210ENST00000604181 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
CCDC12-210ENST00000604181 A0A1W2PNM2 257 aa8.23□□□□□ -1.09
CCDC12-210ENST00000604181 LINC00313P59037 77 aa8.23□□□□□ -1.09
CCDC12-210ENST00000604181 H3BMG7 143 aa8.2□□□□□ -1.1
CCDC12-210ENST00000604181 HIST1H4GQ99525 98 aa8.19□□□□□ -1.1
CCDC12-210ENST00000604181 IGKV4-1P06312 121 aa8.18□□□□□ -1.1
CCDC12-210ENST00000604181 DEFB116Q30KQ4 102 aa8.16□□□□□ -1.1
CCDC12-210ENST00000604181 HIST1H2BLQ99880 126 aa8.16□□□□□ -1.1
CCDC12-210ENST00000604181 HSBP1L1C9JCN9 74 aa8.15□□□□□ -1.1
CCDC12-210ENST00000604181 HIST3H2BBQ8N257 126 aa8.15□□□□□ -1.1
CCDC12-210ENST00000604181 FABP2P12104 132 aa8.13□□□□□ -1.11
CCDC12-210ENST00000604181 H0YGX0 51 aa8.12□□□□□ -1.11
CCDC12-210ENST00000604181 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
CCDC12-210ENST00000604181 LINC00846Q9NV44 126 aa8.11□□□□□ -1.11
CCDC12-210ENST00000604181 IGHV6-1A0A0B4J1U7 121 aa8.1□□□□□ -1.11
CCDC12-210ENST00000604181 A0A1B0GV72 72 aa8.1□□□□□ -1.11
CCDC12-210ENST00000604181 KRTAP6-3Q3LI67 103 aa8.1□□□□□ -1.11
CCDC12-210ENST00000604181 COX8AP10176 69 aa8.09□□□□□ -1.11
CCDC12-210ENST00000604181 RAB37Q96AX2 223 aa8.09□□□□□ -1.11
CCDC12-210ENST00000604181 SNCGO76070 127 aa8.08□□□□□ -1.12
CCDC12-210ENST00000604181 A0A0B4J2C4 111 aa8.07□□□□□ -1.12
CCDC12-210ENST00000604181 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
CCDC12-210ENST00000604181 S100A2P29034 98 aa8.05□□□□□ -1.12
CCDC12-210ENST00000604181 ANKRD29Q8N6D5 301 aa8.05□□□□□ -1.12
CCDC12-210ENST00000604181 Q8N9P0 234 aaPredicted RBP8.05□□□□□ -1.12
CCDC12-210ENST00000604181 A0A1B0GX51 115 aa8.04□□□□□ -1.12
CCDC12-210ENST00000604181 SPINK7P58062 85 aa8.04□□□□□ -1.12
CCDC12-210ENST00000604181 DLEU1O43261 78 aa8.03□□□□□ -1.12
CCDC12-210ENST00000604181 MTURNQ8N3F0 131 aa8.03□□□□□ -1.12
CCDC12-210ENST00000604181 ZCCHC13Q8WW36 166 aaKnown RBP8.02□□□□□ -1.13
CCDC12-210ENST00000604181 C14orf144Q96I85 54 aa8.02□□□□□ -1.13
CCDC12-210ENST00000604181 A8MWP4 228 aa8□□□□□ -1.13
CCDC12-210ENST00000604181 TRIAP1O43715 76 aa8□□□□□ -1.13
CCDC12-210ENST00000604181 C2orf91Q6ZV80 131 aa8□□□□□ -1.13
CCDC12-210ENST00000604181 NEBP20929 6669 aa8□□□□□ -1.13
CCDC12-210ENST00000604181 A0A1B0GVX0 72 aa7.99□□□□□ -1.13
CCDC12-210ENST00000604181 GHRHP01286 108 aa7.99□□□□□ -1.13
CCDC12-210ENST00000604181 CCKP06307 115 aa7.99□□□□□ -1.13
CCDC12-210ENST00000604181 HIGD1BQ9P298 99 aa7.98□□□□□ -1.13
CCDC12-210ENST00000604181 C8orf87E5RJ46 101 aa7.97□□□□□ -1.13
CCDC12-210ENST00000604181 TRACP01848 142 aa7.97□□□□□ -1.13
CCDC12-210ENST00000604181 PRO1854Q9UHT4 67 aa7.97□□□□□ -1.13
CCDC12-210ENST00000604181 FXYD2P54710 66 aa7.95□□□□□ -1.14
CCDC12-210ENST00000604181 WFDC13Q8IUB5 93 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms