RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 REG3GQ6UW15 175 aa9.5□□□□□ -0.89
CDCA3-211ENST00000603043 PKHD1L1Q86WI1 4243 aa9.5□□□□□ -0.89
CDCA3-211ENST00000603043 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
CDCA3-211ENST00000603043 Q5XG85 94 aa9.48□□□□□ -0.89
CDCA3-211ENST00000603043 ZNF861PO60384 105 aa9.48□□□□□ -0.89
CDCA3-211ENST00000603043 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
CDCA3-211ENST00000603043 RPL28P46779 137 aaKnown RBP9.47□□□□□ -0.89
CDCA3-211ENST00000603043 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
CDCA3-211ENST00000603043 DIRC1Q969H9 104 aa9.47□□□□□ -0.89
CDCA3-211ENST00000603043 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
CDCA3-211ENST00000603043 PRYO14603 147 aa9.46□□□□□ -0.89
CDCA3-211ENST00000603043 UBE2AP49459 152 aa9.46□□□□□ -0.89
CDCA3-211ENST00000603043 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.89
CDCA3-211ENST00000603043 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.89
CDCA3-211ENST00000603043 DSCR8Q96T75 97 aa9.46□□□□□ -0.9
CDCA3-211ENST00000603043 OXTP01178 125 aa9.45□□□□□ -0.9
CDCA3-211ENST00000603043 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
CDCA3-211ENST00000603043 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
CDCA3-211ENST00000603043 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
CDCA3-211ENST00000603043 H0Y9J4 135 aa9.44□□□□□ -0.9
CDCA3-211ENST00000603043 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
CDCA3-211ENST00000603043 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
CDCA3-211ENST00000603043 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
CDCA3-211ENST00000603043 PRLHP81277 87 aa9.44□□□□□ -0.9
CDCA3-211ENST00000603043 ATP5EP2Q5VTU8 51 aa9.44□□□□□ -0.9
CDCA3-211ENST00000603043 HRCT1Q6UXD1 115 aa9.44□□□□□ -0.9
CDCA3-211ENST00000603043 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
CDCA3-211ENST00000603043 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
CDCA3-211ENST00000603043 H0YGX0 51 aa9.43□□□□□ -0.9
CDCA3-211ENST00000603043 SPRR1AP35321 89 aa9.43□□□□□ -0.9
CDCA3-211ENST00000603043 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
CDCA3-211ENST00000603043 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
CDCA3-211ENST00000603043 TRAV23DV6A0A075B6W5 121 aa9.41□□□□□ -0.9
CDCA3-211ENST00000603043 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
CDCA3-211ENST00000603043 ETDCA0A1B0GVM5 59 aa9.4□□□□□ -0.9
CDCA3-211ENST00000603043 J3QL48 77 aa9.4□□□□□ -0.9
CDCA3-211ENST00000603043 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
CDCA3-211ENST00000603043 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-211ENST00000603043 C14orf132Q9NPU4 83 aa9.39□□□□□ -0.91
CDCA3-211ENST00000603043 PRO0628Q9UI54 55 aa9.39□□□□□ -0.91
CDCA3-211ENST00000603043 ZNF73O43830 326 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-211ENST00000603043 SERP1Q9Y6X1 66 aa9.38□□□□□ -0.91
CDCA3-211ENST00000603043 A0A087WVE0 104 aa9.37□□□□□ -0.91
CDCA3-211ENST00000603043 HIGD2AQ9BW72 106 aa9.37□□□□□ -0.91
CDCA3-211ENST00000603043 FAM236DA0A1B0GTK5 79 aa9.37□□□□□ -0.91
CDCA3-211ENST00000603043 FAM236CP0DP71 79 aa9.37□□□□□ -0.91
CDCA3-211ENST00000603043 GHRHP01286 108 aa9.36□□□□□ -0.91
CDCA3-211ENST00000603043 CCKP06307 115 aa9.35□□□□□ -0.91
CDCA3-211ENST00000603043 KRTAP1-4P0C5Y4 121 aa9.35□□□□□ -0.91
CDCA3-211ENST00000603043 Q6ZRX8 168 aa9.35□□□□□ -0.91
CDCA3-211ENST00000603043 MT1HL1P0DM35 61 aa9.33□□□□□ -0.92
CDCA3-211ENST00000603043 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
CDCA3-211ENST00000603043 JMJD7-PLA2G4BH0Y9G9 81 aa9.32□□□□□ -0.92
CDCA3-211ENST00000603043 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
CDCA3-211ENST00000603043 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
CDCA3-211ENST00000603043 Q9BRP9 147 aa9.3□□□□□ -0.92
CDCA3-211ENST00000603043 PRR26Q8N8Z3 221 aa9.3□□□□□ -0.92
CDCA3-211ENST00000603043 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
CDCA3-211ENST00000603043 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
CDCA3-211ENST00000603043 ZNF706Q9Y5V0 76 aaPredicted RBP9.28□□□□□ -0.92
CDCA3-211ENST00000603043 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
CDCA3-211ENST00000603043 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.93
CDCA3-211ENST00000603043 C20orf197Q8N268 126 aa9.27□□□□□ -0.93
CDCA3-211ENST00000603043 ANAPC11Q9NYG5 84 aa9.27□□□□□ -0.93
CDCA3-211ENST00000603043 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
CDCA3-211ENST00000603043 COX7BP24311 80 aa9.26□□□□□ -0.93
CDCA3-211ENST00000603043 TNXBP22105 4242 aa9.26□□□□□ -0.93
CDCA3-211ENST00000603043 TRBV7-6A0A0J9YX20 115 aa9.26□□□□□ -0.93
CDCA3-211ENST00000603043 SPRR4Q96PI1 79 aa9.26□□□□□ -0.93
CDCA3-211ENST00000603043 UBL5Q9BZL1 73 aa9.26□□□□□ -0.93
CDCA3-211ENST00000603043 A0A087X002 238 aa9.25□□□□□ -0.93
CDCA3-211ENST00000603043 H7BZZ5 65 aa9.25□□□□□ -0.93
CDCA3-211ENST00000603043 KLKP1Q107X0 134 aa9.25□□□□□ -0.93
CDCA3-211ENST00000603043 ATP5EP56381 51 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-211ENST00000603043 FAM229BQ4G0N7 80 aa9.24□□□□□ -0.93
CDCA3-211ENST00000603043 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
CDCA3-211ENST00000603043 HERC1Q15751 4861 aa9.23□□□□□ -0.93
CDCA3-211ENST00000603043 TMEM256-PLSCR3K7ERE1 68 aa9.23□□□□□ -0.93
CDCA3-211ENST00000603043 NDUFC1O43677 76 aa9.22□□□□□ -0.93
CDCA3-211ENST00000603043 LINC00483Q53H64 154 aa9.19□□□□□ -0.94
CDCA3-211ENST00000603043 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
CDCA3-211ENST00000603043 ST20-AS1Q8NBB2 130 aa9.19□□□□□ -0.94
CDCA3-211ENST00000603043 TYMSOSQ8TAI1 123 aa9.19□□□□□ -0.94
CDCA3-211ENST00000603043 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.94
CDCA3-211ENST00000603043 LOC110117498A0A087WWA1 95 aa9.13□□□□□ -0.95
CDCA3-211ENST00000603043 LINC00575Q6W349 94 aa9.13□□□□□ -0.95
CDCA3-211ENST00000603043 F8WEM9 126 aa9.13□□□□□ -0.95
CDCA3-211ENST00000603043 CXCL6P80162 114 aa9.13□□□□□ -0.95
CDCA3-211ENST00000603043 H3BQ85 93 aa9.12□□□□□ -0.95
CDCA3-211ENST00000603043 Q6ZQT0 140 aa9.12□□□□□ -0.95
CDCA3-211ENST00000603043 DEFB105AQ8NG35 78 aa9.12□□□□□ -0.95
CDCA3-211ENST00000603043 IGLV9-49A0A0B4J1Y8 123 aa9.11□□□□□ -0.95
CDCA3-211ENST00000603043 PDE6GP18545 87 aa9.11□□□□□ -0.95
CDCA3-211ENST00000603043 SPRR1BP22528 89 aa9.11□□□□□ -0.95
CDCA3-211ENST00000603043 LINC01547P58512 204 aaPredicted RBP9.1□□□□□ -0.95
CDCA3-211ENST00000603043 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
CDCA3-211ENST00000603043 V9GYY9 64 aa9.1□□□□□ -0.95
CDCA3-211ENST00000603043 C1orf195Q5TG92 126 aa9.09□□□□□ -0.95
CDCA3-211ENST00000603043 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
CDCA3-211ENST00000603043 MOBPQ13875 183 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms