RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 ASB16-AS1Q495Z4 193 aa12.11□□□□□ -0.47
PPFIA3-208ENST00000602726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.11□□□□□ -0.47
PPFIA3-208ENST00000602726 A0A0B4J2C4 111 aa12.1□□□□□ -0.47
PPFIA3-208ENST00000602726 Q5XG85 94 aa12.1□□□□□ -0.47
PPFIA3-208ENST00000602726 SEC61BP60468 96 aaKnown RBP12.09□□□□□ -0.47
PPFIA3-208ENST00000602726 CEND1Q8N111 149 aa12.09□□□□□ -0.47
PPFIA3-208ENST00000602726 FAT4Q6V0I7 4981 aa12.08□□□□□ -0.48
PPFIA3-208ENST00000602726 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
PPFIA3-208ENST00000602726 A6NJY4 79 aa12.06□□□□□ -0.48
PPFIA3-208ENST00000602726 PYY3Q5JQD4 70 aa12.06□□□□□ -0.48
PPFIA3-208ENST00000602726 XP32Q5T750 250 aa12.06□□□□□ -0.48
PPFIA3-208ENST00000602726 TMA7Q9Y2S6 64 aaKnown RBP12.06□□□□□ -0.48
PPFIA3-208ENST00000602726 SNCGO76070 127 aa12.05□□□□□ -0.48
PPFIA3-208ENST00000602726 Q6JHZ5 121 aa12.05□□□□□ -0.48
PPFIA3-208ENST00000602726 PPDPFLQ8WWR9 84 aa12.05□□□□□ -0.48
PPFIA3-208ENST00000602726 H0YGX0 51 aa12.04□□□□□ -0.48
PPFIA3-208ENST00000602726 OCIAD2Q56VL3 154 aa12.04□□□□□ -0.48
PPFIA3-208ENST00000602726 SNHG12Q9BXW3 62 aa12.04□□□□□ -0.48
PPFIA3-208ENST00000602726 TCL1BO95988 128 aa12.03□□□□□ -0.48
PPFIA3-208ENST00000602726 C1orf195Q5TG92 126 aa12.03□□□□□ -0.48
PPFIA3-208ENST00000602726 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
PPFIA3-208ENST00000602726 IGLV8-61A0A075B6I0 122 aa12.02□□□□□ -0.49
PPFIA3-208ENST00000602726 C9orf92A6NGG3 77 aa12.01□□□□□ -0.49
PPFIA3-208ENST00000602726 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
PPFIA3-208ENST00000602726 FXYD2P54710 66 aa12□□□□□ -0.49
PPFIA3-208ENST00000602726 IGFL1Q6UW32 110 aa11.99□□□□□ -0.49
PPFIA3-208ENST00000602726 FAM218AQ96MZ4 157 aa11.97□□□□□ -0.49
PPFIA3-208ENST00000602726 HSD52Q0P140 79 aa11.96□□□□□ -0.49
PPFIA3-208ENST00000602726 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
PPFIA3-208ENST00000602726 H3BUT2 72 aa11.94□□□□□ -0.5
PPFIA3-208ENST00000602726 KRTAP4-1Q9BYQ7 146 aa11.93□□□□□ -0.5
PPFIA3-208ENST00000602726 A0A1B0GX51 115 aa11.92□□□□□ -0.5
PPFIA3-208ENST00000602726 TRIAP1O43715 76 aa11.91□□□□□ -0.5
PPFIA3-208ENST00000602726 UQCR10Q9UDW1 63 aa11.91□□□□□ -0.5
PPFIA3-208ENST00000602726 GHRHP01286 108 aa11.9□□□□□ -0.5
PPFIA3-208ENST00000602726 NDUFV3P56181 108 aaKnown RBP11.89□□□□□ -0.51
PPFIA3-208ENST00000602726 LCE2AQ5TA79 106 aaPredicted RBP11.88□□□□□ -0.51
PPFIA3-208ENST00000602726 K7ERJ3 54 aa11.87□□□□□ -0.51
PPFIA3-208ENST00000602726 PSMB2P49721 201 aa11.87□□□□□ -0.51
PPFIA3-208ENST00000602726 FABP2P12104 132 aa11.86□□□□□ -0.51
PPFIA3-208ENST00000602726 PCOTHQ58A44 107 aa11.86□□□□□ -0.51
PPFIA3-208ENST00000602726 H3BMG7 143 aa11.82□□□□□ -0.52
PPFIA3-208ENST00000602726 DNAL4O96015 105 aa11.82□□□□□ -0.52
PPFIA3-208ENST00000602726 COX6CP09669 75 aa11.82□□□□□ -0.52
PPFIA3-208ENST00000602726 Q6Q795 121 aa11.81□□□□□ -0.52
PPFIA3-208ENST00000602726 LST1O00453 97 aa11.8□□□□□ -0.52
PPFIA3-208ENST00000602726 TEN1Q86WV5 123 aa11.8□□□□□ -0.52
PPFIA3-208ENST00000602726 SS18L2Q9UHA2 77 aa11.79□□□□□ -0.52
PPFIA3-208ENST00000602726 ORMDL1Q9P0S3 153 aa11.77□□□□□ -0.53
PPFIA3-208ENST00000602726 H3BQ85 93 aa11.76□□□□□ -0.53
PPFIA3-208ENST00000602726 RPL37P61927 97 aaKnown RBP11.76□□□□□ -0.53
PPFIA3-208ENST00000602726 A0A087WSZ3 146 aa11.72□□□□□ -0.53
PPFIA3-208ENST00000602726 TMEM256-PLSCR3K7ERE1 68 aa11.71□□□□□ -0.53
PPFIA3-208ENST00000602726 SCGB1C2P0DMR2 95 aa11.7□□□□□ -0.54
PPFIA3-208ENST00000602726 OBSCN-AS1Q96MR7 158 aa11.7□□□□□ -0.54
PPFIA3-208ENST00000602726 ANKRD29Q8N6D5 301 aa11.69□□□□□ -0.54
PPFIA3-208ENST00000602726 A0A1B0GV72 72 aa11.68□□□□□ -0.54
PPFIA3-208ENST00000602726 A0A1W2PNM2 257 aa11.67□□□□□ -0.54
PPFIA3-208ENST00000602726 TRACP01848 142 aa11.65□□□□□ -0.54
PPFIA3-208ENST00000602726 UBE2V1Q13404 147 aa11.63□□□□□ -0.55
PPFIA3-208ENST00000602726 TRBV7-4A0A0J9YYF1 115 aa11.62□□□□□ -0.55
PPFIA3-208ENST00000602726 M0R143 59 aa11.61□□□□□ -0.55
PPFIA3-208ENST00000602726 SMIM6P0DI80 62 aa11.6□□□□□ -0.55
PPFIA3-208ENST00000602726 Q75L30 129 aa11.6□□□□□ -0.55
PPFIA3-208ENST00000602726 Q96NJ1 140 aa11.6□□□□□ -0.55
PPFIA3-208ENST00000602726 LCE2CQ5TA81 110 aa11.59□□□□□ -0.55
PPFIA3-208ENST00000602726 KRTAP19-2Q3LHN2 52 aa11.58□□□□□ -0.56
PPFIA3-208ENST00000602726 ATP11AUNQ6ZP68 121 aa11.58□□□□□ -0.56
PPFIA3-208ENST00000602726 CCKP06307 115 aa11.57□□□□□ -0.56
PPFIA3-208ENST00000602726 SIGMAR1Q99720 223 aa11.56□□□□□ -0.56
PPFIA3-208ENST00000602726 BAALC-AS2P0C853 105 aa11.53□□□□□ -0.56
PPFIA3-208ENST00000602726 RBM3P98179 157 aaKnown RBP11.53□□□□□ -0.56
PPFIA3-208ENST00000602726 KRTAP9-2Q9BYQ4 174 aa11.52□□□□□ -0.57
PPFIA3-208ENST00000602726 IGKV4-1P06312 121 aa11.51□□□□□ -0.57
PPFIA3-208ENST00000602726 DSCR8Q96T75 97 aa11.51□□□□□ -0.57
PPFIA3-208ENST00000602726 NAA38Q9BRA0 125 aaKnown RBP11.51□□□□□ -0.57
PPFIA3-208ENST00000602726 DSCR10P59022 87 aa11.5□□□□□ -0.57
PPFIA3-208ENST00000602726 VPS25Q9BRG1 176 aa11.5□□□□□ -0.57
PPFIA3-208ENST00000602726 ATXN8Q156A1 80 aa11.49□□□□□ -0.57
PPFIA3-208ENST00000602726 C20orf166-AS1Q96NR2 134 aa11.49□□□□□ -0.57
PPFIA3-208ENST00000602726 A8MUU9 505 aa11.47□□□□□ -0.57
PPFIA3-208ENST00000602726 TSTD3H0UI37 97 aa11.47□□□□□ -0.57
PPFIA3-208ENST00000602726 MT1HP80294 61 aa11.46□□□□□ -0.57
PPFIA3-208ENST00000602726 DEFB116Q30KQ4 102 aa11.46□□□□□ -0.57
PPFIA3-208ENST00000602726 COX6B2Q6YFQ2 88 aa11.46□□□□□ -0.57
PPFIA3-208ENST00000602726 LINC00472Q9H8W2 130 aa11.46□□□□□ -0.57
PPFIA3-208ENST00000602726 LINC00313P59037 77 aa11.45□□□□□ -0.58
PPFIA3-208ENST00000602726 C9JAW5 83 aa11.44□□□□□ -0.58
PPFIA3-208ENST00000602726 BATFQ16520 125 aa11.4□□□□□ -0.58
PPFIA3-208ENST00000602726 LYRM7Q5U5X0 104 aa11.39□□□□□ -0.59
PPFIA3-208ENST00000602726 C21orf62-AS1Q17RA5 79 aa11.38□□□□□ -0.59
PPFIA3-208ENST00000602726 IGHV6-1A0A0B4J1U7 121 aa11.37□□□□□ -0.59
PPFIA3-208ENST00000602726 LOC105371267A0A1B0GV96 52 aa11.37□□□□□ -0.59
PPFIA3-208ENST00000602726 JMJD7-PLA2G4BH0Y9G9 81 aa11.37□□□□□ -0.59
PPFIA3-208ENST00000602726 NOTCH2NLQ7Z3S9 236 aa11.35□□□□□ -0.59
PPFIA3-208ENST00000602726 TRBV20-1A0A075B6N2 111 aa11.34□□□□□ -0.59
PPFIA3-208ENST00000602726 KRTAP16-1A8MUX0 517 aa11.34□□□□□ -0.59
PPFIA3-208ENST00000602726 M0R2T5 61 aa11.33□□□□□ -0.6
PPFIA3-208ENST00000602726 Q6ZQT0 140 aa11.33□□□□□ -0.6
PPFIA3-208ENST00000602726 LOC110117498A0A087WWA1 95 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms