RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 H0Y9J4 135 aa6.18□□□□□ -1.42
UPF1-213ENST00000601981 BCE1O60756 84 aa6.18□□□□□ -1.42
UPF1-213ENST00000601981 UBE2AP49459 152 aa6.18□□□□□ -1.42
UPF1-213ENST00000601981 ACYP1P07311 99 aa6.17□□□□□ -1.42
UPF1-213ENST00000601981 FAM19A1Q7Z5A9 133 aa6.17□□□□□ -1.42
UPF1-213ENST00000601981 KRTAP11-1Q8IUC1 163 aa6.17□□□□□ -1.42
UPF1-213ENST00000601981 IGLV5-48A0A075B6I7 105 aa6.16□□□□□ -1.42
UPF1-213ENST00000601981 SMCR5Q8TEV8 140 aa6.16□□□□□ -1.42
UPF1-213ENST00000601981 C14orf132Q9NPU4 83 aa6.16□□□□□ -1.42
UPF1-213ENST00000601981 LAMTOR3Q9UHA4 124 aa6.16□□□□□ -1.42
UPF1-213ENST00000601981 ZNF861PO60384 105 aa6.15□□□□□ -1.42
UPF1-213ENST00000601981 LINC01547P58512 204 aaPredicted RBP6.15□□□□□ -1.42
UPF1-213ENST00000601981 RBM3P98179 157 aaKnown RBP6.15□□□□□ -1.42
UPF1-213ENST00000601981 CDIP1Q9H305 208 aa6.15□□□□□ -1.42
UPF1-213ENST00000601981 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
UPF1-213ENST00000601981 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
UPF1-213ENST00000601981 ERC2-IT1O76042 136 aa6.14□□□□□ -1.43
UPF1-213ENST00000601981 NDUFV3P56181 108 aaKnown RBP6.14□□□□□ -1.43
UPF1-213ENST00000601981 PRLHP81277 87 aa6.14□□□□□ -1.43
UPF1-213ENST00000601981 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
UPF1-213ENST00000601981 Q8N377 158 aa6.14□□□□□ -1.43
UPF1-213ENST00000601981 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
UPF1-213ENST00000601981 A0A1B0GV72 72 aa6.13□□□□□ -1.43
UPF1-213ENST00000601981 CCKP06307 115 aa6.13□□□□□ -1.43
UPF1-213ENST00000601981 PDE6GP18545 87 aa6.13□□□□□ -1.43
UPF1-213ENST00000601981 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
UPF1-213ENST00000601981 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
UPF1-213ENST00000601981 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
UPF1-213ENST00000601981 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
UPF1-213ENST00000601981 DSCR8Q96T75 97 aa6.12□□□□□ -1.43
UPF1-213ENST00000601981 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
UPF1-213ENST00000601981 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
UPF1-213ENST00000601981 TRBV7-4A0A0J9YYF1 115 aa6.11□□□□□ -1.43
UPF1-213ENST00000601981 OXTP01178 125 aa6.11□□□□□ -1.43
UPF1-213ENST00000601981 Q6ZQT0 140 aa6.11□□□□□ -1.43
UPF1-213ENST00000601981 DEFB105AQ8NG35 78 aa6.11□□□□□ -1.43
UPF1-213ENST00000601981 SPRR1BP22528 89 aa6.09□□□□□ -1.43
UPF1-213ENST00000601981 SIGMAR1Q99720 223 aa6.09□□□□□ -1.43
UPF1-213ENST00000601981 KRTAP29-1A8MX34 341 aaPredicted RBP6.08□□□□□ -1.44
UPF1-213ENST00000601981 J3QL48 77 aa6.08□□□□□ -1.44
UPF1-213ENST00000601981 ZNF706Q9Y5V0 76 aaPredicted RBP6.08□□□□□ -1.44
UPF1-213ENST00000601981 SMIM29Q86T20 159 aa6.07□□□□□ -1.44
UPF1-213ENST00000601981 F8WEM9 126 aa6.06□□□□□ -1.44
UPF1-213ENST00000601981 LINC00643Q86TS7 51 aa6.06□□□□□ -1.44
UPF1-213ENST00000601981 C3orf22Q8N5N4 141 aa6.06□□□□□ -1.44
UPF1-213ENST00000601981 IGLV8-61A0A075B6I0 122 aa6.05□□□□□ -1.44
UPF1-213ENST00000601981 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
UPF1-213ENST00000601981 LINC00846Q9NV44 126 aa6.05□□□□□ -1.44
UPF1-213ENST00000601981 UBR4Q5T4S7 5183 aa6.04□□□□□ -1.44
UPF1-213ENST00000601981 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
UPF1-213ENST00000601981 A0A1B0GW54 56 aa6.03□□□□□ -1.44
UPF1-213ENST00000601981 SPRR4Q96PI1 79 aa6.03□□□□□ -1.44
UPF1-213ENST00000601981 CRYGAP11844 174 aa6.02□□□□□ -1.45
UPF1-213ENST00000601981 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
UPF1-213ENST00000601981 LINC00483Q53H64 154 aa6.02□□□□□ -1.45
UPF1-213ENST00000601981 UBL5Q9BZL1 73 aa6.02□□□□□ -1.45
UPF1-213ENST00000601981 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
UPF1-213ENST00000601981 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
UPF1-213ENST00000601981 Q6JHZ5 121 aa6.01□□□□□ -1.45
UPF1-213ENST00000601981 Q8NBF4 154 aa6.01□□□□□ -1.45
UPF1-213ENST00000601981 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
UPF1-213ENST00000601981 SCGB1A1P11684 91 aa6□□□□□ -1.45
UPF1-213ENST00000601981 ATP5EP2Q5VTU8 51 aa6□□□□□ -1.45
UPF1-213ENST00000601981 A0A1W2PNM2 257 aa5.99□□□□□ -1.45
UPF1-213ENST00000601981 Q6Q795 121 aa5.99□□□□□ -1.45
UPF1-213ENST00000601981 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
UPF1-213ENST00000601981 IMUPQ9GZP8 106 aa5.99□□□□□ -1.45
UPF1-213ENST00000601981 IGFL1Q6UW32 110 aa5.98□□□□□ -1.45
UPF1-213ENST00000601981 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
UPF1-213ENST00000601981 Q6ZVQ6 151 aa5.97□□□□□ -1.45
UPF1-213ENST00000601981 TYMSOSQ8TAI1 123 aa5.97□□□□□ -1.45
UPF1-213ENST00000601981 A0A087X002 238 aa5.96□□□□□ -1.46
UPF1-213ENST00000601981 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
UPF1-213ENST00000601981 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
UPF1-213ENST00000601981 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.46
UPF1-213ENST00000601981 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
UPF1-213ENST00000601981 CXCL6P80162 114 aa5.93□□□□□ -1.46
UPF1-213ENST00000601981 NREPQ16612 68 aa5.93□□□□□ -1.46
UPF1-213ENST00000601981 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
UPF1-213ENST00000601981 IGLV9-49A0A0B4J1Y8 123 aa5.92□□□□□ -1.46
UPF1-213ENST00000601981 KRTAP13-2Q52LG2 175 aa5.92□□□□□ -1.46
UPF1-213ENST00000601981 TNXBP22105 4242 aa5.92□□□□□ -1.46
UPF1-213ENST00000601981 C4orf48Q5BLP8 95 aa5.91□□□□□ -1.46
UPF1-213ENST00000601981 LINC00304Q8N9R0 145 aa5.91□□□□□ -1.46
UPF1-213ENST00000601981 A0A0G2JQZ4 141 aa5.9□□□□□ -1.46
UPF1-213ENST00000601981 MOBPQ13875 183 aa5.9□□□□□ -1.46
UPF1-213ENST00000601981 SSBP3-AS1Q7Z2R9 100 aa5.9□□□□□ -1.46
UPF1-213ENST00000601981 A0A087WSZ3 146 aa5.89□□□□□ -1.47
UPF1-213ENST00000601981 SPAG11AQ6PDA7 123 aa5.89□□□□□ -1.47
UPF1-213ENST00000601981 BPY2O14599 106 aa5.88□□□□□ -1.47
UPF1-213ENST00000601981 PCP4P48539 62 aa5.87□□□□□ -1.47
UPF1-213ENST00000601981 LCE2AQ5TA79 106 aaPredicted RBP5.87□□□□□ -1.47
UPF1-213ENST00000601981 FAM236AA0A1B0GUQ0 79 aa5.86□□□□□ -1.47
UPF1-213ENST00000601981 FAM236BA0A1B0GV22 79 aa5.86□□□□□ -1.47
UPF1-213ENST00000601981 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
UPF1-213ENST00000601981 A0A087WVE0 104 aa5.85□□□□□ -1.47
UPF1-213ENST00000601981 CD164Q04900 197 aa5.85□□□□□ -1.47
UPF1-213ENST00000601981 SS18L2Q9UHA2 77 aa5.85□□□□□ -1.47
UPF1-213ENST00000601981 SPINK1P00995 79 aa5.84□□□□□ -1.47
UPF1-213ENST00000601981 IGKV4-1P06312 121 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms