RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 COX7BP24311 80 aa9.75□□□□□ -0.85
SSBP4-207ENST00000600244 M0R143 59 aa9.74□□□□□ -0.85
SSBP4-207ENST00000600244 K7ERJ3 54 aa9.73□□□□□ -0.85
SSBP4-207ENST00000600244 M0R2T5 61 aa9.73□□□□□ -0.85
SSBP4-207ENST00000600244 FLGP20930 4061 aaPredicted RBP9.72□□□□□ -0.85
SSBP4-207ENST00000600244 H7C2G1 150 aa9.71□□□□□ -0.86
SSBP4-207ENST00000600244 SPRR4Q96PI1 79 aa9.71□□□□□ -0.86
SSBP4-207ENST00000600244 DHRS4-AS1Q9P1J3 65 aa9.71□□□□□ -0.86
SSBP4-207ENST00000600244 VAMP3Q15836 100 aa9.69□□□□□ -0.86
SSBP4-207ENST00000600244 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
SSBP4-207ENST00000600244 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
SSBP4-207ENST00000600244 LINC00483Q53H64 154 aa9.67□□□□□ -0.86
SSBP4-207ENST00000600244 ZNF706Q9Y5V0 76 aaPredicted RBP9.67□□□□□ -0.86
SSBP4-207ENST00000600244 TRIAP1O43715 76 aa9.65□□□□□ -0.86
SSBP4-207ENST00000600244 Q1RN00 199 aa9.65□□□□□ -0.86
SSBP4-207ENST00000600244 ST20-AS1Q8NBB2 130 aa9.65□□□□□ -0.86
SSBP4-207ENST00000600244 SYNE2Q8WXH0 6885 aaKnown RBP9.65□□□□□ -0.86
SSBP4-207ENST00000600244 IGLV8-61A0A075B6I0 122 aa9.64□□□□□ -0.87
SSBP4-207ENST00000600244 H0YGX0 51 aa9.64□□□□□ -0.87
SSBP4-207ENST00000600244 SPINK1P00995 79 aa9.63□□□□□ -0.87
SSBP4-207ENST00000600244 SPRR1BP22528 89 aa9.63□□□□□ -0.87
SSBP4-207ENST00000600244 MACF1Q9UPN3 7388 aaKnown RBP9.62□□□□□ -0.87
SSBP4-207ENST00000600244 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
SSBP4-207ENST00000600244 PCOTHQ58A44 107 aa9.62□□□□□ -0.87
SSBP4-207ENST00000600244 FAM218AQ96MZ4 157 aa9.62□□□□□ -0.87
SSBP4-207ENST00000600244 hADV29S1A0JD25 119 aa9.61□□□□□ -0.87
SSBP4-207ENST00000600244 SLC25A20O43772 301 aa9.61□□□□□ -0.87
SSBP4-207ENST00000600244 GAGE2AQ6NT46 116 aa9.61□□□□□ -0.87
SSBP4-207ENST00000600244 Q8NBF4 154 aa9.61□□□□□ -0.87
SSBP4-207ENST00000600244 SNHG12Q9BXW3 62 aa9.59□□□□□ -0.87
SSBP4-207ENST00000600244 PSMB2P49721 201 aa9.58□□□□□ -0.88
SSBP4-207ENST00000600244 BATFQ16520 125 aa9.58□□□□□ -0.88
SSBP4-207ENST00000600244 A0A1B0GX51 115 aa9.57□□□□□ -0.88
SSBP4-207ENST00000600244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.57□□□□□ -0.88
SSBP4-207ENST00000600244 Q8N377 158 aa9.57□□□□□ -0.88
SSBP4-207ENST00000600244 TEX49A0A1B0GTD5 131 aa9.56□□□□□ -0.88
SSBP4-207ENST00000600244 COX6CP09669 75 aa9.56□□□□□ -0.88
SSBP4-207ENST00000600244 Q6ZQY7 126 aa9.56□□□□□ -0.88
SSBP4-207ENST00000600244 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
SSBP4-207ENST00000600244 SMIM29Q86T20 159 aa9.54□□□□□ -0.88
SSBP4-207ENST00000600244 TAX1BP3O14907 124 aa9.53□□□□□ -0.88
SSBP4-207ENST00000600244 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
SSBP4-207ENST00000600244 PCP4L1A6NKN8 68 aa9.52□□□□□ -0.89
SSBP4-207ENST00000600244 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.89
SSBP4-207ENST00000600244 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
SSBP4-207ENST00000600244 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
SSBP4-207ENST00000600244 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
SSBP4-207ENST00000600244 LST1O00453 97 aa9.5□□□□□ -0.89
SSBP4-207ENST00000600244 SNCGO76070 127 aa9.5□□□□□ -0.89
SSBP4-207ENST00000600244 SCGB1C2P0DMR2 95 aa9.5□□□□□ -0.89
SSBP4-207ENST00000600244 OCIAD2Q56VL3 154 aa9.5□□□□□ -0.89
SSBP4-207ENST00000600244 PPDPFLQ8WWR9 84 aa9.5□□□□□ -0.89
SSBP4-207ENST00000600244 LAMTOR3Q9UHA4 124 aa9.49□□□□□ -0.89
SSBP4-207ENST00000600244 IGLV9-49A0A0B4J1Y8 123 aa9.48□□□□□ -0.89
SSBP4-207ENST00000600244 H3BUT2 72 aa9.48□□□□□ -0.89
SSBP4-207ENST00000600244 TRACP01848 142 aa9.48□□□□□ -0.89
SSBP4-207ENST00000600244 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
SSBP4-207ENST00000600244 SSBP3-AS1Q7Z2R9 100 aa9.48□□□□□ -0.89
SSBP4-207ENST00000600244 MOBPQ13875 183 aa9.47□□□□□ -0.89
SSBP4-207ENST00000600244 COL5A1-AS1Q5SY13 56 aa9.46□□□□□ -0.9
SSBP4-207ENST00000600244 TCL1BO95988 128 aa9.45□□□□□ -0.9
SSBP4-207ENST00000600244 A0A1W2PPM0 123 aa9.43□□□□□ -0.9
SSBP4-207ENST00000600244 DNAL4O96015 105 aa9.43□□□□□ -0.9
SSBP4-207ENST00000600244 LYRM7Q5U5X0 104 aa9.43□□□□□ -0.9
SSBP4-207ENST00000600244 KRTAP9-8Q9BYQ0 159 aa9.43□□□□□ -0.9
SSBP4-207ENST00000600244 GHRHP01286 108 aa9.42□□□□□ -0.9
SSBP4-207ENST00000600244 C9orf153Q5TBE3 101 aa9.42□□□□□ -0.9
SSBP4-207ENST00000600244 ORMDL1Q9P0S3 153 aa9.42□□□□□ -0.9
SSBP4-207ENST00000600244 TRBV20-1A0A075B6N2 111 aa9.41□□□□□ -0.9
SSBP4-207ENST00000600244 H3BQ85 93 aa9.41□□□□□ -0.9
SSBP4-207ENST00000600244 ATXN8Q156A1 80 aa9.41□□□□□ -0.9
SSBP4-207ENST00000600244 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
SSBP4-207ENST00000600244 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
SSBP4-207ENST00000600244 F8WEM9 126 aa9.36□□□□□ -0.91
SSBP4-207ENST00000600244 FABP2P12104 132 aa9.36□□□□□ -0.91
SSBP4-207ENST00000600244 UBE2V1Q13404 147 aa9.36□□□□□ -0.91
SSBP4-207ENST00000600244 A0A0G2JQZ4 141 aa9.34□□□□□ -0.91
SSBP4-207ENST00000600244 BAALC-AS2P0C853 105 aa9.34□□□□□ -0.91
SSBP4-207ENST00000600244 CD164Q04900 197 aa9.34□□□□□ -0.91
SSBP4-207ENST00000600244 Q6JHZ5 121 aa9.34□□□□□ -0.91
SSBP4-207ENST00000600244 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
SSBP4-207ENST00000600244 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
SSBP4-207ENST00000600244 LCE2BO14633 110 aa9.32□□□□□ -0.92
SSBP4-207ENST00000600244 H3BMG7 143 aa9.31□□□□□ -0.92
SSBP4-207ENST00000600244 SPCS1Q9Y6A9 102 aa9.31□□□□□ -0.92
SSBP4-207ENST00000600244 C9JAW5 83 aa9.3□□□□□ -0.92
SSBP4-207ENST00000600244 KRTAP6-3Q3LI67 103 aa9.3□□□□□ -0.92
SSBP4-207ENST00000600244 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
SSBP4-207ENST00000600244 K7EP34 96 aa9.26□□□□□ -0.93
SSBP4-207ENST00000600244 Q5XG85 94 aa9.26□□□□□ -0.93
SSBP4-207ENST00000600244 HRCT1Q6UXD1 115 aa9.26□□□□□ -0.93
SSBP4-207ENST00000600244 H3BT86 120 aa9.25□□□□□ -0.93
SSBP4-207ENST00000600244 Q6Q795 121 aa9.25□□□□□ -0.93
SSBP4-207ENST00000600244 TRBV7-4A0A0J9YYF1 115 aa9.23□□□□□ -0.93
SSBP4-207ENST00000600244 TRBV7-7A0A0K0K1E9 115 aa9.23□□□□□ -0.93
SSBP4-207ENST00000600244 OBSCN-AS1Q96MR7 158 aa9.23□□□□□ -0.93
SSBP4-207ENST00000600244 A0A1W2PNM2 257 aa9.22□□□□□ -0.93
SSBP4-207ENST00000600244 RBM3P98179 157 aaKnown RBP9.22□□□□□ -0.93
SSBP4-207ENST00000600244 MTURNQ8N3F0 131 aa9.22□□□□□ -0.93
SSBP4-207ENST00000600244 PRO0461Q9UI25 63 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms